RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 NogP97466 232 aa28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Vwa3aQ3UVV9 1148 aa28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Naa35Q6PHQ8 725 aa28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Atg4cQ811C2 458 aa28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Phtf1Q9QZ09 761 aa28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Pcdh15Q99PJ1 1943 aa28.5■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Surf1P09925 306 aa28.5■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Epb41l4aP52963 686 aa28.5■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Samsn1P57725 372 aa28.5■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Neurl1bQ0MW30 546 aa28.5■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Abhd15Q5F2F2 459 aa28.5■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Ppp2r2cQ8BG02 447 aa28.5■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Pym1Q8CHP5 203 aaKnown RBP28.5■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Sulf1Q8K007 870 aa28.5■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Dph6Q9CQ28 267 aa28.5■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Egfl6Q9JJZ5 550 aa28.5■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Extl3Q9WVL6 918 aa28.5■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Zfp984A2A7A2 547 aa28.49■■■□□ 2.15
Tpm1-216ENSMUST00000113707 TfrcQ62351 763 aaKnown RBP28.49■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Ccdc14Q8K2J4 934 aa28.49■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Pappa2E9PZ87 1789 aa28.49■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Cpb1B2RS76 415 aa28.49■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Scarf1Q5ND28 820 aa28.49■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Krt9Q6RHW0 743 aa28.49■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Lca5lQ8C0X0 741 aa28.49■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Ribc1Q9D0B8 379 aa28.49■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Tubb4aQ9D6F9 444 aa28.49■■■□□ 2.15
Tpm1-216ENSMUST00000113707 CoasyQ9DBL7 563 aa28.49■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Kmt2eQ3UG20 1868 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Lrrc38A2VDH3 298 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Gm1993A6X8I0 212 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 SlxD3Z347 212 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Oog1E9Q5G7 496 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 SfnO70456 248 aaKnown RBP28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Prl2c2P04095 224 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 FlgP11088 336 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Mcm5P49718 733 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Trim43cP86449 446 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Wdr70Q3TWF6 657 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Tmem130Q6NXM3 419 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Cnksr2Q80YA9 1032 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Tcp11l2Q8K1H7 517 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Ubxn2aQ99KJ0 258 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Tmem192Q9CXT7 266 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 2310002L09RikQ9D7L5 217 aa28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Eef1gQ9D8N0 437 aaKnown RBP28.48■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Tpp1O89023 562 aa28.47■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Ms4a1P19437 291 aa28.47■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Abcd1P48410 736 aa28.47■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Eepd1Q3TGW2 569 aa28.47■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Slc10a4Q3UEZ8 437 aa28.47■■■□□ 2.15
Tpm1-216ENSMUST00000113707 CtcfQ61164 736 aaKnown RBP28.47■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Usp17leQ7M764 540 aa28.47■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Sun2Q8BJS4 731 aa28.47■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Usp26Q99MX1 835 aa28.47■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Igf2bp3Q9CPN8 579 aaKnown RBP28.47■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Rbp7Q9EPC5 134 aa28.47■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Ndst4Q9EQW8 872 aa28.47■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Cntn6Q9JMB8 1028 aa28.47■■■□□ 2.15
Tpm1-216ENSMUST00000113707 MyocO70624 490 aa28.46■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Idh1O88844 414 aaKnown RBP28.46■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Ttll12Q3UDE2 639 aa28.46■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Cacna2d4Q5RJF7 1116 aa28.46■■■□□ 2.15
Tpm1-216ENSMUST00000113707 PycardQ9EPB4 193 aa28.46■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Trim30aP15533 496 aa28.46■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Mier3Q3UHF3 551 aa28.46■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Rcor2Q8C796 523 aa28.46■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Bbs7Q8K2G4 715 aa28.46■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Vmn1r199Q8R280 367 aa28.46■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Abcb6Q9DC29 842 aa28.46■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Irx4Q9QY61 515 aa28.46■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Ace3D0G895 737 aa28.45■■■□□ 2.15
Tpm1-216ENSMUST00000113707 TazI7HJS2 263 aa28.45■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Magea8O89012 320 aa28.45■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Stim2P83093 746 aa28.45■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Lamb3Q61087 1168 aa28.45■■■□□ 2.15
Tpm1-216ENSMUST00000113707 PodnQ7TQ62 611 aa28.45■■■□□ 2.15
Tpm1-216ENSMUST00000113707 GanQ8CA72 597 aa28.45■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Ttll10A4Q9F3 704 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Gm4907B1AXB9 411 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Akap2O54931 893 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Gna14P30677 355 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Ap5z1Q3U829 807 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Dnph1Q80VJ3 173 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Spice1Q8C804 860 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Ero1bQ8R2E9 467 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Arl8aQ8VEH3 186 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Q9D5Q8 446 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Gcnt4E9Q649 455 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Atp9aO70228 1047 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Smchd1Q6P5D8 2007 aaKnown RBP28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Btnl9Q8BJE2 536 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Pgm5Q8BZF8 567 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Traf3ip3Q8C0G2 513 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Rtp1Q8C8C1 263 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Pcdhb12Q91Y07 789 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Prpf6Q91YR7 941 aaKnown RBP28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Tube1Q9D6T1 475 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 Arhgef7Q9ES28 862 aa28.44■■■□□ 2.14
Tpm1-216ENSMUST00000113707 DexiQ9WUQ7 95 aa28.44■■■□□ 2.14
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms