RNA–Protein interactions for RNA: snR52

snR52, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR52, Length 92 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR52	snR52	AXL2	P38928	823 aa		0.51	□□□□□ -2.33
snR52	snR52	CCT2	P39076	527 aa	Known RBP	0.51	□□□□□ -2.33
snR52	snR52	FHL1	P39521	936 aa		0.51	□□□□□ -2.33
snR52	snR52	SSB2	P40150	613 aa	Known RBP	0.51	□□□□□ -2.33
snR52	snR52	EGT2	P42835	1041 aa		0.51	□□□□□ -2.33
snR52	snR52	VID30	P53076	958 aa		0.51	□□□□□ -2.33
snR52	snR52	MST27	P53176	234 aa		0.51	□□□□□ -2.33
snR52	snR52	HST4	P53688	370 aa		0.51	□□□□□ -2.33
snR52	snR52	ZRG17	P53735	605 aa		0.51	□□□□□ -2.33
snR52	snR52	FRE4	P53746	719 aa		0.51	□□□□□ -2.33
snR52	snR52	IPI3	P53877	555 aa		0.51	□□□□□ -2.33
snR52	snR52	NCS2	P53923	493 aa	Predicted RBP	0.51	□□□□□ -2.33
snR52	snR52	HOT1	Q03213	719 aa		0.51	□□□□□ -2.33
snR52	snR52	FIN1	Q03898	291 aa		0.51	□□□□□ -2.33
snR52	snR52	TIR4	Q12218	487 aa	Predicted RBP	0.51	□□□□□ -2.33
snR52	snR52	YGK3	Q12222	375 aa	Predicted RBP	0.51	□□□□□ -2.33
snR52	snR52	ARG4	P04076	463 aa	Predicted RBP	0.5	□□□□□ -2.33
snR52	snR52	RPS19A	P07280	144 aa	Known RBP	0.5	□□□□□ -2.33
snR52	snR52	RPS19B	P07281	144 aa	Predicted RBP	0.5	□□□□□ -2.33
snR52	snR52	RPL19A	P0CX82	189 aa	Known RBP	0.5	□□□□□ -2.33
snR52	snR52	RPL19B	P0CX83	189 aa	Predicted RBP	0.5	□□□□□ -2.33
snR52	snR52	ZRC1	P20107	442 aa		0.5	□□□□□ -2.33
snR52	snR52	TCD2	P36101	447 aa	Known RBP	0.5	□□□□□ -2.33
snR52	snR52	CBP4	P37267	147 aa		0.5	□□□□□ -2.33
snR52	snR52	ATG12	P38316	186 aa		0.5	□□□□□ -2.33
snR52	snR52	SBE22	P38814	852 aa		0.5	□□□□□ -2.33
snR52	snR52	ALG5	P40350	334 aa		0.5	□□□□□ -2.33
snR52	snR52	ECM27	P47144	725 aa		0.5	□□□□□ -2.33
snR52	snR52	AZR1	P50080	613 aa		0.5	□□□□□ -2.33
snR52	snR52	IMD4	P50094	524 aa	Known RBP	0.5	□□□□□ -2.33
snR52	snR52	VHT1	P53241	593 aa		0.5	□□□□□ -2.33
snR52	snR52	YSA1	Q01976	231 aa		0.5	□□□□□ -2.33
snR52	snR52	SKI8	Q02793	397 aa	Predicted RBP	0.5	□□□□□ -2.33
snR52	snR52	BCH1	Q05029	724 aa		0.5	□□□□□ -2.33
snR52	snR52	NYV1	Q12255	253 aa		0.5	□□□□□ -2.33
snR52	snR52	YOL085C	Q99345	113 aa		0.5	□□□□□ -2.33
snR52	snR52	AST1	P35183	429 aa		0.49	□□□□□ -2.33
snR52	snR52	YIR035C	P40579	254 aa		0.49	□□□□□ -2.33
snR52	snR52	TFG2	P41896	400 aa	Predicted RBP	0.49	□□□□□ -2.33
snR52	snR52	IGD1	P43598	195 aa		0.49	□□□□□ -2.33
snR52	snR52	KTR5	P53966	522 aa	Predicted RBP	0.49	□□□□□ -2.33
snR52	snR52	RPT6	Q01939	405 aa	Known RBP	0.49	□□□□□ -2.33
snR52	snR52	NUP116	Q02630	1113 aa		0.49	□□□□□ -2.33
snR52	snR52	RTN1	Q04947	295 aa	Known RBP	0.49	□□□□□ -2.33
snR52	snR52	MFG1	Q07684	458 aa		0.49	□□□□□ -2.33
snR52	snR52	RLM1	Q12224	676 aa		0.49	□□□□□ -2.33
snR52	snR52	ORT1	Q12375	292 aa		0.49	□□□□□ -2.33
snR52	snR52	HIS4	P00815	799 aa	Known RBP	0.48	□□□□□ -2.33
snR52	snR52	CDC24	P11433	854 aa	Predicted RBP	0.48	□□□□□ -2.33
snR52	snR52	ATP10	P18496	279 aa		0.48	□□□□□ -2.33
snR52	snR52	POL4	P25615	582 aa		0.48	□□□□□ -2.33
snR52	snR52	PHA2	P32452	334 aa		0.48	□□□□□ -2.33
snR52	snR52	LYS1	P38998	373 aa	RIP-Chip data	0.48	□□□□□ -2.33	not detected
snR52	snR52	COS4	P43542	379 aa		0.48	□□□□□ -2.33
snR52	snR52	RPL21A	Q02753	160 aa	Known RBP	0.48	□□□□□ -2.33
snR52	snR52	IOC4	Q04213	475 aa		0.48	□□□□□ -2.33
snR52	snR52	RPL21B	Q12672	160 aa	Known RBP	0.48	□□□□□ -2.33
snR52	snR52	DEP1	P31385	405 aa		0.47	□□□□□ -2.33
snR52	snR52	MKK1	P32490	508 aa		0.47	□□□□□ -2.33
snR52	snR52	SKN1	P33336	771 aa		0.47	□□□□□ -2.33
snR52	snR52	PET130	P47065	347 aa		0.47	□□□□□ -2.33
snR52	snR52	COQ5	P49017	307 aa		0.47	□□□□□ -2.33
snR52	snR52	YGL108C	P53139	140 aa		0.47	□□□□□ -2.33
snR52	snR52	SYF1	Q04048	859 aa	Predicted RBP	0.47	□□□□□ -2.33
snR52	snR52	CEX1	Q12453	761 aa		0.47	□□□□□ -2.33
snR52	snR52	YPT6	Q99260	215 aa		0.47	□□□□□ -2.33
snR52	snR52	RPL31B	P0C2H9	113 aa	Known RBP	0.46	□□□□□ -2.34
snR52	snR52	PRE8	P23639	250 aa		0.46	□□□□□ -2.34
snR52	snR52	PRP21	P32524	280 aa	Predicted RBP	0.46	□□□□□ -2.34
snR52	snR52	YEF1	P32622	495 aa		0.46	□□□□□ -2.34
snR52	snR52	WBP1	P33767	430 aa	Known RBP	0.46	□□□□□ -2.34
snR52	snR52	FRM2	P37261	193 aa		0.46	□□□□□ -2.34
snR52	snR52	THI2	P38141	450 aa		0.46	□□□□□ -2.34
snR52	snR52	PSY4	P38193	441 aa		0.46	□□□□□ -2.34
snR52	snR52	PCF11	P39081	626 aa	Predicted RBP	0.46	□□□□□ -2.34
snR52	snR52	YIL029C	P40538	142 aa		0.46	□□□□□ -2.34
snR52	snR52	SFH5	P47008	294 aa		0.46	□□□□□ -2.34
snR52	snR52	TAP42	Q04372	366 aa		0.46	□□□□□ -2.34
snR52	snR52	FAR10	Q06001	478 aa		0.46	□□□□□ -2.34
snR52	snR52	RRP9	Q06506	573 aa	Known RBP	0.46	□□□□□ -2.34
snR52	snR52	YEH1	Q07804	573 aa		0.46	□□□□□ -2.34
snR52	snR52	SKI7	Q08491	747 aa	Predicted RBP	0.46	□□□□□ -2.34
snR52	snR52	YDL007C-A	Q2V2Q0	85 aa		0.46	□□□□□ -2.34
snR52	snR52	NAG1	Q8TGN9	163 aa		0.46	□□□□□ -2.34
snR52	snR52	ILV5	P06168	395 aa	Known RBP	0.45	□□□□□ -2.34
snR52	snR52	DBF20	P32328	564 aa		0.45	□□□□□ -2.34
snR52	snR52	TRR2	P38816	342 aa		0.45	□□□□□ -2.34
snR52	snR52	DSL1	P53847	754 aa		0.45	□□□□□ -2.34
snR52	snR52	YDR387C	Q04162	555 aa		0.45	□□□□□ -2.34
snR52	snR52	HSP31	Q04432	237 aa		0.45	□□□□□ -2.34
snR52	snR52	PLB3	Q08108	686 aa		0.45	□□□□□ -2.34
snR52	snR52	DAL5	P15365	543 aa		0.44	□□□□□ -2.34
snR52	snR52	MRM2	P53123	320 aa		0.44	□□□□□ -2.34
snR52	snR52	CLD1	P53264	445 aa		0.44	□□□□□ -2.34
snR52	snR52	UBX4	P54730	416 aa		0.44	□□□□□ -2.34
snR52	snR52	MDM36	Q06820	579 aa		0.44	□□□□□ -2.34
snR52	snR52	RAX1	Q08760	435 aa		0.44	□□□□□ -2.34
snR52	snR52	RIM20	Q12033	661 aa		0.44	□□□□□ -2.34
snR52	snR52	YLR278C	Q05854	1341 aa		0.43	□□□□□ -2.34
snR52	snR52	RHO2	P06781	192 aa		0.43	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 128.5 ms