RNA–Protein interactions for RNA: YPL149W

ATG5, Transcript of Conserved protein involved in autophagy and the Cvt pathway, yeast

Gene ATG5, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG5	YPL149W	YLR456W	Q06199	204 aa		3.6	□□□□□ -1.83
ATG5	YPL149W	PPT2	Q12036	173 aa		3.6	□□□□□ -1.83
ATG5	YPL149W	YLL056C	Q12177	298 aa		3.6	□□□□□ -1.83
ATG5	YPL149W	RPN5	Q12250	445 aa	Known RBP	3.6	□□□□□ -1.83
ATG5	YPL149W	COX3	P00420	269 aa		3.59	□□□□□ -1.83
ATG5	YPL149W	PMR1	P13586	950 aa		3.59	□□□□□ -1.83
ATG5	YPL149W	CPR1	P14832	162 aa	Known RBP	3.59	□□□□□ -1.83
ATG5	YPL149W	ARO3	P14843	370 aa	Known RBP	3.59	□□□□□ -1.83
ATG5	YPL149W	RNA14	P25298	677 aa	Known RBP	3.59	□□□□□ -1.83
ATG5	YPL149W	SEC28	P40509	296 aa	Known RBP	3.59	□□□□□ -1.83
ATG5	YPL149W	MEP2	P41948	499 aa		3.59	□□□□□ -1.83
ATG5	YPL149W	LAM5	P43560	674 aa		3.59	□□□□□ -1.83
ATG5	YPL149W	COS10	P52924	374 aa		3.59	□□□□□ -1.83
ATG5	YPL149W	SCS3	P53012	380 aa		3.59	□□□□□ -1.83
ATG5	YPL149W	CAF40	P53829	373 aa		3.59	□□□□□ -1.83
ATG5	YPL149W	PKH2	Q12236	1081 aa	Known RBP	3.59	□□□□□ -1.83
ATG5	YPL149W	ORT1	Q12375	292 aa		3.59	□□□□□ -1.83
ATG5	YPL149W	HSP82	P02829	709 aa	Known RBP	3.58	□□□□□ -1.84
ATG5	YPL149W	ADE4	P04046	510 aa	Known RBP	3.58	□□□□□ -1.84
ATG5	YPL149W	PDE2	P06776	526 aa		3.58	□□□□□ -1.84
ATG5	YPL149W	CTR86	P25355	563 aa		3.58	□□□□□ -1.84
ATG5	YPL149W	RRP7	P25368	297 aa	Predicted RBP	3.58	□□□□□ -1.84
ATG5	YPL149W	TIP1	P27654	210 aa	Predicted RBP	3.58	□□□□□ -1.84
ATG5	YPL149W	DPH2	P32461	534 aa		3.58	□□□□□ -1.84
ATG5	YPL149W	SWI3	P32591	825 aa		3.58	□□□□□ -1.84
ATG5	YPL149W	SWH1	P35845	1188 aa		3.58	□□□□□ -1.84
ATG5	YPL149W	ASC1	P38011	319 aa	Known RBP	3.58	□□□□□ -1.84
ATG5	YPL149W	RXT2	P38255	430 aa		3.58	□□□□□ -1.84
ATG5	YPL149W	PCA1	P38360	1216 aa		3.58	□□□□□ -1.84
ATG5	YPL149W	MKT1	P40850	830 aa	Known RBP	3.58	□□□□□ -1.84
ATG5	YPL149W	GPI15	P53961	229 aa		3.58	□□□□□ -1.84
ATG5	YPL149W	BET5	Q03630	159 aa		3.58	□□□□□ -1.84
ATG5	YPL149W	TAF12	Q03761	539 aa		3.58	□□□□□ -1.84
ATG5	YPL149W	SGT1	Q08446	395 aa		3.58	□□□□□ -1.84
ATG5	YPL149W	TIM18	Q08749	192 aa		3.58	□□□□□ -1.84
ATG5	YPL149W	ARG4	P04076	463 aa	Predicted RBP	3.57	□□□□□ -1.84
ATG5	YPL149W	CHS1	P08004	1131 aa		3.57	□□□□□ -1.84
ATG5	YPL149W	IMA3	P0CW40	589 aa		3.57	□□□□□ -1.84
ATG5	YPL149W	IMA4	P0CW41	589 aa		3.57	□□□□□ -1.84
ATG5	YPL149W	LSB5	P25369	354 aa		3.57	□□□□□ -1.84
ATG5	YPL149W	RIM1	P32445	135 aa	Known RBP	3.57	□□□□□ -1.84
ATG5	YPL149W	NAT2	P37293	288 aa		3.57	□□□□□ -1.84
ATG5	YPL149W	PCF11	P39081	626 aa	Predicted RBP	3.57	□□□□□ -1.84
ATG5	YPL149W	OST1	P41543	476 aa	Known RBP	3.57	□□□□□ -1.84
ATG5	YPL149W	SSN8	P47821	323 aa		3.57	□□□□□ -1.84
ATG5	YPL149W	RHO5	P53879	331 aa	Known RBP	3.57	□□□□□ -1.84
ATG5	YPL149W	PEX25	Q02969	394 aa		3.57	□□□□□ -1.84
ATG5	YPL149W	IMA2	Q08295	589 aa		3.57	□□□□□ -1.84
ATG5	YPL149W	THP3	Q12049	470 aa	Known RBP	3.57	□□□□□ -1.84
ATG5	YPL149W	YMR230W-A	Q3E7B5	62 aa		3.57	□□□□□ -1.84
ATG5	YPL149W	YBR298C-A	Q8TGK4	73 aa		3.57	□□□□□ -1.84
ATG5	YPL149W	TEF1	P02994	458 aa	Known RBP	3.56	□□□□□ -1.84
ATG5	YPL149W	RPL1A	P0CX43	217 aa	Known RBP	3.56	□□□□□ -1.84
ATG5	YPL149W	RPL1B	P0CX44	217 aa	Known RBP	3.56	□□□□□ -1.84
ATG5	YPL149W	RAD57	P25301	460 aa		3.56	□□□□□ -1.84
ATG5	YPL149W	ITR1	P30605	584 aa		3.56	□□□□□ -1.84
ATG5	YPL149W	MRP4	P32902	394 aa		3.56	□□□□□ -1.84
ATG5	YPL149W	OLA1	P38219	394 aa	Known RBP	3.56	□□□□□ -1.84
ATG5	YPL149W	APE4	P38821	490 aa		3.56	□□□□□ -1.84
ATG5	YPL149W	MST28	P39552	234 aa		3.56	□□□□□ -1.84
ATG5	YPL149W	YAL037W	P39728	267 aa		3.56	□□□□□ -1.84
ATG5	YPL149W	YNR048W	P53740	393 aa		3.56	□□□□□ -1.84
ATG5	YPL149W	GOR1	P53839	350 aa		3.56	□□□□□ -1.84
ATG5	YPL149W	MDG1	P53885	366 aa		3.56	□□□□□ -1.84
ATG5	YPL149W	RSN1	Q03516	953 aa		3.56	□□□□□ -1.84
ATG5	YPL149W	NAT1	P12945	854 aa	Known RBP	3.55	□□□□□ -1.84
ATG5	YPL149W	PRP16	P15938	1071 aa	Predicted RBP	3.55	□□□□□ -1.84
ATG5	YPL149W	YBR056W	P38081	501 aa		3.55	□□□□□ -1.84
ATG5	YPL149W	RIB5	P38145	238 aa		3.55	□□□□□ -1.84
ATG5	YPL149W	KRE9	P39005	276 aa		3.55	□□□□□ -1.84
ATG5	YPL149W	GAT2	P40209	560 aa		3.55	□□□□□ -1.84
ATG5	YPL149W	PIB2	P53191	635 aa		3.55	□□□□□ -1.84
ATG5	YPL149W	SKI7	Q08491	747 aa	Predicted RBP	3.55	□□□□□ -1.84
ATG5	YPL149W	BUG1	Q12191	341 aa		3.55	□□□□□ -1.84
ATG5	YPL149W	RMD5	Q12508	421 aa		3.55	□□□□□ -1.84
ATG5	YPL149W	RRP12	Q12754	1228 aa	Known RBP	3.55	□□□□□ -1.84
ATG5	YPL149W	SPO12	P17123	173 aa		3.54	□□□□□ -1.84
ATG5	YPL149W	SLY1	P22213	666 aa		3.54	□□□□□ -1.84
ATG5	YPL149W	KKQ8	P36004	724 aa		3.54	□□□□□ -1.84
ATG5	YPL149W	GPI16	P38875	610 aa		3.54	□□□□□ -1.84
ATG5	YPL149W	STN1	P38960	494 aa		3.54	□□□□□ -1.84
ATG5	YPL149W	YFL067W	P43537	175 aa		3.54	□□□□□ -1.84
ATG5	YPL149W	ROG1	P53118	685 aa		3.54	□□□□□ -1.84
ATG5	YPL149W	MSO1	P53604	210 aa	Known RBP	3.54	□□□□□ -1.84
ATG5	YPL149W	RPN9	Q04062	393 aa	Known RBP	3.54	□□□□□ -1.84
ATG5	YPL149W	SNT309	Q06091	175 aa	Predicted RBP	3.54	□□□□□ -1.84
ATG5	YPL149W	ATG34	Q12292	412 aa		3.54	□□□□□ -1.84
ATG5	YPL149W	YCL021W-A	Q96VH3	125 aa		3.54	□□□□□ -1.84
ATG5	YPL149W	CDC21	P06785	304 aa		3.53	□□□□□ -1.84
ATG5	YPL149W	PHO91	P27514	894 aa		3.53	□□□□□ -1.84
ATG5	YPL149W	PUP2	P32379	260 aa		3.53	□□□□□ -1.84
ATG5	YPL149W	NIP1	P32497	812 aa	Known RBP	3.53	□□□□□ -1.84
ATG5	YPL149W	CYS4	P32582	507 aa	Known RBP	3.53	□□□□□ -1.84
ATG5	YPL149W	PFF1	P38244	976 aa		3.53	□□□□□ -1.84
ATG5	YPL149W	YBP1	P38315	674 aa		3.53	□□□□□ -1.84
ATG5	YPL149W	STP2	P38704	541 aa		3.53	□□□□□ -1.84
ATG5	YPL149W	YER079W	P40052	210 aa	Known RBP	3.53	□□□□□ -1.84
ATG5	YPL149W	IDP2	P41939	412 aa		3.53	□□□□□ -1.84
ATG5	YPL149W	NCA3	P46955	337 aa		3.53	□□□□□ -1.84
ATG5	YPL149W	IBD2	P53892	351 aa		3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms