RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C YOS9Q99220 542 aa9.26□□□□□ -0.93
SSN3YPL042C YLR149CQ99296 730 aa9.26□□□□□ -0.93
SSN3YPL042C GLN4P13188 809 aaKnown RBP9.26□□□□□ -0.93
SSN3YPL042C OLE1P21147 510 aaKnown RBP9.26□□□□□ -0.93
SSN3YPL042C SIR1P21691 654 aa9.26□□□□□ -0.93
SSN3YPL042C RBK1P25332 333 aa9.26□□□□□ -0.93
SSN3YPL042C IMP3P32899 183 aaPredicted RBP9.26□□□□□ -0.93
SSN3YPL042C STB6P36085 766 aa9.26□□□□□ -0.93
SSN3YPL042C ALY1P36117 915 aa9.26□□□□□ -0.93
SSN3YPL042C RGI2P40188 164 aa9.26□□□□□ -0.93
SSN3YPL042C SMK1P41808 388 aa9.26□□□□□ -0.93
SSN3YPL042C OYE3P41816 400 aaPredicted RBP9.26□□□□□ -0.93
SSN3YPL042C YJR096WP47137 282 aa9.26□□□□□ -0.93
SSN3YPL042C ACS2P52910 683 aaKnown RBP9.26□□□□□ -0.93
SSN3YPL042C PIR1Q03178 341 aa9.26□□□□□ -0.93
SSN3YPL042C TMN2Q04562 672 aa9.26□□□□□ -0.93
SSN3YPL042C ARG7Q04728 441 aa9.26□□□□□ -0.93
SSN3YPL042C YDR344CQ05510 147 aa9.26□□□□□ -0.93
SSN3YPL042C SRO7Q12038 1033 aa9.26□□□□□ -0.93
SSN3YPL042C YPT6Q99260 215 aa9.26□□□□□ -0.93
SSN3YPL042C IMG1P25626 169 aa9.25□□□□□ -0.93
SSN3YPL042C PRP19P32523 503 aaKnown RBP9.25□□□□□ -0.93
SSN3YPL042C CTF13P35203 478 aa9.25□□□□□ -0.93
SSN3YPL042C SOP4P39543 234 aaPredicted RBP9.25□□□□□ -0.93
SSN3YPL042C SOK1P40317 901 aa9.25□□□□□ -0.93
SSN3YPL042C OTU1P43558 301 aa9.25□□□□□ -0.93
SSN3YPL042C ARC1P46672 376 aaKnown RBP9.25□□□□□ -0.93
SSN3YPL042C SIP4P46954 829 aa9.25□□□□□ -0.93
SSN3YPL042C COG1P53079 417 aa9.25□□□□□ -0.93
SSN3YPL042C YNL181WP53878 407 aa9.25□□□□□ -0.93
SSN3YPL042C NBA1Q08229 501 aaKnown RBP9.25□□□□□ -0.93
SSN3YPL042C ULA1Q12059 462 aa9.25□□□□□ -0.93
SSN3YPL042C REP1P03871 373 aa9.24□□□□□ -0.93
SSN3YPL042C STE12P13574 688 aa9.24□□□□□ -0.93
SSN3YPL042C NSP1P14907 823 aaKnown RBP9.24□□□□□ -0.93
SSN3YPL042C CHL1P22516 861 aaPredicted RBP9.24□□□□□ -0.93
SSN3YPL042C RPC19P28000 142 aaKnown RBP9.24□□□□□ -0.93
SSN3YPL042C KKQ8P36004 724 aa9.24□□□□□ -0.93
SSN3YPL042C DUN1P39009 513 aa9.24□□□□□ -0.93
SSN3YPL042C SSO2P39926 295 aa9.24□□□□□ -0.93
SSN3YPL042C AIM23P47015 356 aa9.24□□□□□ -0.93
SSN3YPL042C ORC3P54790 616 aa9.24□□□□□ -0.93
SSN3YPL042C YDR132CQ03900 495 aa9.24□□□□□ -0.93
SSN3YPL042C YOL107WQ12239 342 aa9.24□□□□□ -0.93
SSN3YPL042C RIB2Q12362 591 aaKnown RBP9.24□□□□□ -0.93
SSN3YPL042C RAM1P22007 431 aa9.23□□□□□ -0.93
SSN3YPL042C YCR101CP25607 182 aa9.23□□□□□ -0.93
SSN3YPL042C FMO1P38866 432 aa9.23□□□□□ -0.93
SSN3YPL042C HAT2P39984 401 aa9.23□□□□□ -0.93
SSN3YPL042C PAN6P40459 309 aa9.23□□□□□ -0.93
SSN3YPL042C CHS6P40955 746 aa9.23□□□□□ -0.93
SSN3YPL042C GAB1P41733 394 aa9.23□□□□□ -0.93
SSN3YPL042C YGR042WP53227 271 aa9.23□□□□□ -0.93
SSN3YPL042C THP3Q12049 470 aaKnown RBP9.23□□□□□ -0.93
SSN3YPL042C HMS1Q12398 434 aa9.23□□□□□ -0.93
SSN3YPL042C STE2D6VTK4 431 aa9.23□□□□□ -0.93
SSN3YPL042C SBP1P10080 294 aaKnown RBP9.23□□□□□ -0.93
SSN3YPL042C AMD1P15274 810 aaKnown RBP9.23□□□□□ -0.93
SSN3YPL042C KIN3P22209 435 aa9.23□□□□□ -0.93
SSN3YPL042C YCL049CP25577 312 aa9.23□□□□□ -0.93
SSN3YPL042C KAP122P32767 1081 aa9.23□□□□□ -0.93
SSN3YPL042C LIP5P32875 414 aa9.23□□□□□ -0.93
SSN3YPL042C SCD5P34758 872 aa9.23□□□□□ -0.93
SSN3YPL042C SHM2P37291 469 aaKnown RBP9.23□□□□□ -0.93
SSN3YPL042C ERG10P41338 398 aaKnown RBP9.23□□□□□ -0.93
SSN3YPL042C TES1P41903 349 aaKnown RBP9.23□□□□□ -0.93
SSN3YPL042C SPP2Q02521 185 aa9.23□□□□□ -0.93
SSN3YPL042C TVP15Q03860 143 aa9.23□□□□□ -0.93
SSN3YPL042C CSN9Q03981 162 aa9.23□□□□□ -0.93
SSN3YPL042C YOL019WQ08157 551 aa9.23□□□□□ -0.93
SSN3YPL042C YPL225WQ08971 146 aaKnown RBP9.23□□□□□ -0.93
SSN3YPL042C AKR2Q12013 749 aa9.23□□□□□ -0.93
SSN3YPL042C YTM1Q12024 460 aaPredicted RBP9.23□□□□□ -0.93
SSN3YPL042C APC9Q12107 265 aa9.23□□□□□ -0.93
SSN3YPL042C CBS1P14066 229 aa9.22□□□□□ -0.93
SSN3YPL042C ARO3P14843 370 aaKnown RBP9.22□□□□□ -0.93
SSN3YPL042C ARG1P22768 420 aa9.22□□□□□ -0.93
SSN3YPL042C YCR099CP25657 155 aa9.22□□□□□ -0.93
SSN3YPL042C LDB7P38210 180 aa9.22□□□□□ -0.93
SSN3YPL042C BZZ1P38822 633 aa9.22□□□□□ -0.93
SSN3YPL042C YIL001WP40560 513 aa9.22□□□□□ -0.93
SSN3YPL042C GLG2P47011 380 aa9.22□□□□□ -0.93
SSN3YPL042C TWF1P53250 332 aa9.22□□□□□ -0.93
SSN3YPL042C SLI1P53304 468 aa9.22□□□□□ -0.93
SSN3YPL042C YMR265CQ03508 461 aaKnown RBP9.22□□□□□ -0.93
SSN3YPL042C HPT1Q04178 221 aaKnown RBP9.22□□□□□ -0.93
SSN3YPL042C YPR114WQ06107 315 aa9.22□□□□□ -0.93
SSN3YPL042C MCM21Q06675 368 aa9.22□□□□□ -0.93
SSN3YPL042C TMA46Q12000 345 aaKnown RBP9.22□□□□□ -0.93
SSN3YPL042C YDR034W-BQ6Q5X2 51 aa9.22□□□□□ -0.93
SSN3YPL042C YPR117WQ06116 2489 aa9.21□□□□□ -0.93
SSN3YPL042C PHO5P00635 467 aa9.21□□□□□ -0.93
SSN3YPL042C MDH1P17505 334 aaKnown RBP RIP-Chip data9.21□□□□□ -0.93not detected
SSN3YPL042C CTR86P25355 563 aa9.21□□□□□ -0.93
SSN3YPL042C BUD23P25627 275 aaPredicted RBP9.21□□□□□ -0.93
SSN3YPL042C PYC2P32327 1180 aaKnown RBP9.21□□□□□ -0.93
SSN3YPL042C MVD1P32377 396 aaKnown RBP9.21□□□□□ -0.93
SSN3YPL042C MAL32P38158 584 aa9.21□□□□□ -0.93
SSN3YPL042C CDS1P38221 457 aa9.21□□□□□ -0.93
SSN3YPL042C FZO1P38297 855 aa9.21□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms