RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCR1	YPL006W	AIM14	P53109	570 aa		3.79	□□□□□ -1.8
NCR1	YPL006W	MPC1	P53157	130 aa	Known RBP	3.79	□□□□□ -1.8
NCR1	YPL006W	MKC7	P53379	596 aa		3.79	□□□□□ -1.8
NCR1	YPL006W	HST3	P53687	447 aa		3.79	□□□□□ -1.8
NCR1	YPL006W	YNL034W	P53963	612 aa		3.79	□□□□□ -1.8
NCR1	YPL006W	FIN1	Q03898	291 aa		3.79	□□□□□ -1.8
NCR1	YPL006W	YML083C	Q04526	418 aa		3.79	□□□□□ -1.8
NCR1	YPL006W	YPQ1	Q12010	308 aa		3.79	□□□□□ -1.8
NCR1	YPL006W	YOR338W	Q99326	363 aa		3.79	□□□□□ -1.8
NCR1	YPL006W	AI3	P03877	415 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	RPL6B	P05739	176 aa	Known RBP	3.78	□□□□□ -1.8
NCR1	YPL006W	PHO4	P07270	312 aa	Known RBP	3.78	□□□□□ -1.8
NCR1	YPL006W	CAP2	P13517	287 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	SAM35	P14693	329 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	HSP30	P25619	332 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.78	□□□□□ -1.8	not detected
NCR1	YPL006W	GLG1	P36143	616 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	RRG9	P40156	214 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	BTT1	P40314	149 aa	Predicted RBP	3.78	□□□□□ -1.8
NCR1	YPL006W	NTA1	P40354	457 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	GIP3	Q03016	1276 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	YMR206W	Q03695	313 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	RSC3	Q06639	885 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	PEX27	Q08580	376 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	RPN5	Q12250	445 aa	Known RBP	3.78	□□□□□ -1.8
NCR1	YPL006W	MAS1	P10507	462 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	GRX2	P17695	143 aa	Known RBP	3.78	□□□□□ -1.8
NCR1	YPL006W	PGS1	P25578	521 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	POA1	P38218	177 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	SSN3	P39073	555 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	RPH1	P39956	796 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	YFL052W	P43551	465 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	RET2	P43621	546 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	YJR098C	P47139	656 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	JHD2	P47156	728 aa	Predicted RBP	3.78	□□□□□ -1.8
NCR1	YPL006W	YGR015C	P53208	328 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.78	□□□□□ -1.8	not detected
NCR1	YPL006W	RAD59	Q12223	238 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	RRP42	Q12277	265 aa	Predicted RBP	3.78	□□□□□ -1.8
NCR1	YPL006W	YPR1	Q12458	312 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	TSC13	Q99190	310 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	ATP4	P05626	244 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	SWI5	P08153	709 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	NCP1	P16603	691 aa	Known RBP	3.78	□□□□□ -1.8
NCR1	YPL006W	YIM1	P28625	365 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	CAT2	P32796	670 aa	Known RBP	3.78	□□□□□ -1.8
NCR1	YPL006W	SGE1	P33335	543 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	SPO23	P33757	523 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	VPS21	P36017	210 aa	Known RBP	3.78	□□□□□ -1.8
NCR1	YPL006W	DOT6	P40059	670 aa	Known RBP	3.78	□□□□□ -1.8
NCR1	YPL006W	SPO74	P45819	413 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	RQC1	Q05468	723 aa	Known RBP	3.78	□□□□□ -1.8
NCR1	YPL006W	YPR114W	Q06107	315 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	SPO77	Q06134	477 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	MRI1	Q06489	411 aa	Known RBP	3.78	□□□□□ -1.8
NCR1	YPL006W	SYO1	Q07395	620 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	COS7	Q07788	383 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	GTT2	Q12390	233 aa		3.78	□□□□□ -1.8
NCR1	YPL006W	SIR3	P06701	978 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	ADE5,7	P07244	802 aa	Known RBP	3.77	□□□□□ -1.81
NCR1	YPL006W	FUM1	P08417	488 aa	Known RBP	3.77	□□□□□ -1.81
NCR1	YPL006W	RSR1	P13856	272 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	TFS1	P14306	219 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	MNE1	P24720	663 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	RRP7	P25368	297 aa	Predicted RBP	3.77	□□□□□ -1.81
NCR1	YPL006W	SYP1	P25623	870 aa	Known RBP	3.77	□□□□□ -1.81
NCR1	YPL006W	THI4	P32318	326 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	STP2	P38704	541 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	EXO1	P39875	702 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	YEL073C	P39974	107 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	YGR210C	P42942	411 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	YAT1	P80235	687 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	AAT1	Q01802	451 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	YPL071C	Q02864	156 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	YML108W	Q03759	105 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	PHO92	Q06390	306 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	BUD7	Q08754	746 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	YBL113C	Q7M4S9	792 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	ARF2	P19146	181 aa	Known RBP	3.77	□□□□□ -1.81
NCR1	YPL006W	DAL81	P21657	970 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	IDP1	P21954	428 aa	Known RBP	3.77	□□□□□ -1.81
NCR1	YPL006W	HXT4	P32467	576 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	SPS19	P32573	292 aa	Known RBP	3.77	□□□□□ -1.81
NCR1	YPL006W	LHP1	P33399	275 aa	Known RBP	3.77	□□□□□ -1.81
NCR1	YPL006W	DHR2	P36009	735 aa	Predicted RBP	3.77	□□□□□ -1.81
NCR1	YPL006W	YPT52	P36018	234 aa	Known RBP	3.77	□□□□□ -1.81
NCR1	YPL006W	MBA1	P38300	278 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	DBP8	P38719	431 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	PCL5	P38794	229 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	HXT6	P39003	570 aa	Known RBP	3.77	□□□□□ -1.81
NCR1	YPL006W	HXT7	P39004	570 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	QDR2	P40474	542 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	YJR030C	P47101	745 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	TRM82	Q03774	444 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	YLR446W	Q06204	433 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	ENV7	Q12003	364 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	BAG7	Q12128	409 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	NMD4	Q12129	218 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	BSC1	Q12140	328 aa		3.77	□□□□□ -1.81
NCR1	YPL006W	APA1	P16550	321 aa	Known RBP	3.77	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms