RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
CAF20	YOR276W	YSC83	P32792	385 aa		3.54	□□□□□ -1.84
CAF20	YOR276W	YNK1	P36010	153 aa	Known RBP	3.54	□□□□□ -1.84
CAF20	YOR276W	FRE2	P36033	711 aa		3.54	□□□□□ -1.84
CAF20	YOR276W	YCR041W	P37265	110 aa		3.54	□□□□□ -1.84
CAF20	YOR276W	QDR3	P38227	689 aa		3.54	□□□□□ -1.84
CAF20	YOR276W	SPP381	P38282	291 aa	Predicted RBP	3.54	□□□□□ -1.84
CAF20	YOR276W	STP2	P38704	541 aa		3.54	□□□□□ -1.84
CAF20	YOR276W	RRF1	P38771	230 aa		3.54	□□□□□ -1.84
CAF20	YOR276W	PCL6	P40038	420 aa		3.54	□□□□□ -1.84
CAF20	YOR276W	GUF1	P46943	645 aa		3.54	□□□□□ -1.84
CAF20	YOR276W	MDV1	P47025	714 aa		3.54	□□□□□ -1.84
CAF20	YOR276W	HMS2	P47175	358 aa		3.54	□□□□□ -1.84
CAF20	YOR276W	PHB2	P50085	310 aa		3.54	□□□□□ -1.84
CAF20	YOR276W	YIP1	P53039	248 aa		3.54	□□□□□ -1.84
CAF20	YOR276W	UTP6	Q02354	440 aa	Known RBP	3.54	□□□□□ -1.84
CAF20	YOR276W	IRC15	Q02733	499 aa		3.54	□□□□□ -1.84
CAF20	YOR276W	SYO1	Q07395	620 aa		3.54	□□□□□ -1.84
CAF20	YOR276W	CSR2	Q12734	1121 aa		3.54	□□□□□ -1.84
CAF20	YOR276W	CHS1	P08004	1131 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	IMA3	P0CW40	589 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	IMA4	P0CW41	589 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	AMD1	P15274	810 aa	Known RBP	3.53	□□□□□ -1.84
CAF20	YOR276W	HNM1	P19807	563 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	RAD57	P25301	460 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	NIP1	P32497	812 aa	Known RBP	3.53	□□□□□ -1.84
CAF20	YOR276W	SUR1	P33300	382 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	RSM22	P36056	628 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	KAP104	P38217	918 aa	Known RBP	3.53	□□□□□ -1.84
CAF20	YOR276W	INM1	P38710	295 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	RRP3	P38712	501 aa	Known RBP	3.53	□□□□□ -1.84
CAF20	YOR276W	SPC97	P38863	823 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	YER079W	P40052	210 aa	Known RBP	3.53	□□□□□ -1.84
CAF20	YOR276W	ELP2	P42935	788 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	ASN2	P49090	572 aa	Known RBP	3.53	□□□□□ -1.84
CAF20	YOR276W	VTI1	Q04338	217 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	YMR254C	Q04838	102 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	SNT309	Q06091	175 aa	Predicted RBP	3.53	□□□□□ -1.84
CAF20	YOR276W	IPK1	Q06667	281 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	NOP6	Q07623	225 aa	Known RBP	3.53	□□□□□ -1.84
CAF20	YOR276W	REX4	Q08237	289 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	IMA2	Q08295	589 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	BUG1	Q12191	341 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	YDL009C	Q12210	107 aa		3.53	□□□□□ -1.84
CAF20	YOR276W	YPT1	P01123	206 aa	Known RBP	3.52	□□□□□ -1.85
CAF20	YOR276W	DST1	P07273	309 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	GLN3	P18494	730 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	CTR86	P25355	563 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	NDI1	P32340	513 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	PTK1	P36002	662 aa	Predicted RBP	3.52	□□□□□ -1.85
CAF20	YOR276W	MSG5	P38590	489 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	LYS1	P38998	373 aa	RIP-Chip data	3.52	□□□□□ -1.85	not detected
CAF20	YOR276W	YPS6	P40583	537 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	MEP2	P41948	499 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	RPA34	P47006	233 aa	Predicted RBP	3.52	□□□□□ -1.85
CAF20	YOR276W	GPI15	P53961	229 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	PRO2	P54885	456 aa	Known RBP	3.52	□□□□□ -1.85
CAF20	YOR276W	PNG1	Q02890	363 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	DIG1	Q03063	452 aa	Known RBP	3.52	□□□□□ -1.85
CAF20	YOR276W	TAF12	Q03761	539 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	NSE1	Q07913	336 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	YEH2	Q07950	538 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	MDY2	Q12285	212 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	SFG1	Q12507	346 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	NBL1	Q3E7Y6	73 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	SRN2	Q99176	213 aa		3.52	□□□□□ -1.85
CAF20	YOR276W	YAR066W	P0CX18	203 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	YHR214W	P0CX19	203 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	YCR100C	P25606	316 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	SRB2	P34162	210 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	SIP2	P34164	415 aa	Known RBP	3.51	□□□□□ -1.85
CAF20	YOR276W	RTT107	P38850	1070 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	YAL037W	P39728	267 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	PCL7	P40186	285 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	PAC11	P40960	533 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	GWT1	P47026	490 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	MPP10	P47083	593 aa	Known RBP	3.51	□□□□□ -1.85
CAF20	YOR276W	EFM3	P47163	339 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	BRO1	P48582	844 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	MPS2	P53159	387 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	FRE4	P53746	719 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	PRM1	P53835	661 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	MRPL1	Q04599	285 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	YMR034C	Q05131	434 aa	Predicted RBP	3.51	□□□□□ -1.85
CAF20	YOR276W	VPS74	Q06385	345 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	MLH2	Q07980	695 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	DSE3	Q08729	430 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	RTC5	Q12108	567 aa	Known RBP	3.51	□□□□□ -1.85
CAF20	YOR276W	YPR022C	Q12139	1133 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	RUP1	Q12242	671 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	ORT1	Q12375	292 aa		3.51	□□□□□ -1.85
CAF20	YOR276W	OPI3	P05375	206 aa		3.5	□□□□□ -1.85
CAF20	YOR276W	YFL068W	P0CX99	160 aa		3.5	□□□□□ -1.85
CAF20	YOR276W	YLL066W-A	P0CY00	160 aa		3.5	□□□□□ -1.85
CAF20	YOR276W	YLL067W-A	P0CY01	160 aa		3.5	□□□□□ -1.85
CAF20	YOR276W	RGT1	P32862	1170 aa		3.5	□□□□□ -1.85
CAF20	YOR276W	PCH2	P38126	564 aa		3.5	□□□□□ -1.85
CAF20	YOR276W	RIM2	P38127	377 aa		3.5	□□□□□ -1.85
CAF20	YOR276W	YHR177W	P38867	453 aa		3.5	□□□□□ -1.85
CAF20	YOR276W	YIR014W	P40570	242 aa		3.5	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms