RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	VOA1	P53262	265 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	RPS15	Q01855	142 aa	Known RBP	5.23	□□□□□ -1.57
NUP1	YOR098C	SRL4	Q03085	281 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	DCP1	Q12517	231 aa	Predicted RBP	5.23	□□□□□ -1.57
NUP1	YOR098C	PSO2	P30620	661 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	YKL023W	P36103	277 aa	Known RBP	5.22	□□□□□ -1.57
NUP1	YOR098C	OTU1	P43558	301 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	UBP16	Q02863	499 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	NRT1	Q08485	598 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	RKM1	Q08961	583 aa	Predicted RBP	5.22	□□□□□ -1.57
NUP1	YOR098C	KSS1	P14681	368 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	EMP70	P32802	667 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	IMP3	P32899	183 aa	Predicted RBP	5.22	□□□□□ -1.57
NUP1	YOR098C	SOF1	P33750	489 aa	Known RBP	5.22	□□□□□ -1.57
NUP1	YOR098C	STV1	P37296	890 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	ICS2	P38284	255 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	ATM1	P40416	690 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	BNA6	P43619	295 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	TOS3	P43637	560 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	GTO3	Q04806	366 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	RXT3	Q07458	294 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	PKH2	Q12236	1081 aa	Known RBP	5.22	□□□□□ -1.57
NUP1	YOR098C	ZPS1	Q12512	249 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	Q0010	Q9ZZX9	128 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	ADE6	P38972	1358 aa	Known RBP	5.22	□□□□□ -1.57
NUP1	YOR098C	SWI1	P09547	1314 aa		5.22	□□□□□ -1.57
NUP1	YOR098C	RAD3	P06839	778 aa		5.21	□□□□□ -1.57
NUP1	YOR098C	YPK1	P12688	680 aa	Known RBP	5.21	□□□□□ -1.57
NUP1	YOR098C	KGD2	P19262	463 aa	Predicted RBP	5.21	□□□□□ -1.57
NUP1	YOR098C	RAD23	P32628	398 aa	Known RBP	5.21	□□□□□ -1.57
NUP1	YOR098C	CCT4	P39078	528 aa	Known RBP	5.21	□□□□□ -1.57
NUP1	YOR098C	YHB1	P39676	399 aa	Known RBP	5.21	□□□□□ -1.57
NUP1	YOR098C	PTR3	P43606	678 aa		5.21	□□□□□ -1.57
NUP1	YOR098C	ATG27	P46989	271 aa		5.21	□□□□□ -1.57
NUP1	YOR098C	YPT11	P48559	417 aa		5.21	□□□□□ -1.57
NUP1	YOR098C	IST1	P53843	298 aa	Predicted RBP	5.21	□□□□□ -1.57
NUP1	YOR098C	MDM30	Q05930	598 aa		5.21	□□□□□ -1.57
NUP1	YOR098C	POS5	Q06892	414 aa		5.21	□□□□□ -1.57
NUP1	YOR098C	YPL150W	Q12152	901 aa		5.21	□□□□□ -1.57
NUP1	YOR098C	APC2	Q12440	853 aa		5.21	□□□□□ -1.57
NUP1	YOR098C	ERG11	P10614	530 aa		5.21	□□□□□ -1.58
NUP1	YOR098C	TRM2	P33753	639 aa		5.21	□□□□□ -1.58
NUP1	YOR098C	YRB2	P40517	327 aa		5.21	□□□□□ -1.58
NUP1	YOR098C	ECM30	Q06673	1274 aa		5.21	□□□□□ -1.58
NUP1	YOR098C	LAM4	P38800	1345 aa		5.21	□□□□□ -1.58
NUP1	YOR098C	RPO26	P20435	155 aa		5.21	□□□□□ -1.58
NUP1	YOR098C	YUR1	P26725	428 aa		5.21	□□□□□ -1.58
NUP1	YOR098C	KRE2	P27809	442 aa		5.21	□□□□□ -1.58
NUP1	YOR098C	GAC1	P28006	793 aa		5.21	□□□□□ -1.58
NUP1	YOR098C	SAF1	P38352	637 aa		5.21	□□□□□ -1.58
NUP1	YOR098C	TAX4	P47030	604 aa		5.21	□□□□□ -1.58
NUP1	YOR098C	SLG1	P54867	378 aa		5.21	□□□□□ -1.58
NUP1	YOR098C	APC4	Q04601	652 aa		5.21	□□□□□ -1.58
NUP1	YOR098C	GPN3	Q06543	272 aa		5.21	□□□□□ -1.58
NUP1	YOR098C	BSC6	Q08280	497 aa		5.21	□□□□□ -1.58
NUP1	YOR098C	AI3	P03877	415 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	CDC21	P06785	304 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	RIP1	P08067	215 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	HXT2	P23585	541 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	SEC14	P24280	304 aa	Known RBP	5.2	□□□□□ -1.58
NUP1	YOR098C	YPS1	P32329	569 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	FRE1	P32791	686 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	CTP1	P38152	299 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	ALP1	P38971	573 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	ICP55	P40051	511 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	YML053C	Q04978	212 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	TRM13	Q12383	476 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	PDR18	P53756	1333 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	RVS161	P25343	265 aa	Known RBP	5.2	□□□□□ -1.58
NUP1	YOR098C	LAC1	P28496	418 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	MEI5	P32489	222 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
NUP1	YOR098C	YHR177W	P38867	453 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	NDC80	P40460	691 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	YMR187C	Q03236	431 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	ROT1	Q03691	256 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	RRP12	Q12754	1228 aa	Known RBP	5.2	□□□□□ -1.58
NUP1	YOR098C	SPO24	Q3E752	67 aa		5.2	□□□□□ -1.58
NUP1	YOR098C	GPH1	P06738	902 aa	Known RBP	5.19	□□□□□ -1.58
NUP1	YOR098C	COR1	P07256	457 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	PEP5	P12868	1029 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	PRP16	P15938	1071 aa	Predicted RBP	5.19	□□□□□ -1.58
NUP1	YOR098C	PTC6	P25646	442 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	LHS1	P36016	881 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	GMH1	P36125	273 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	RPF2	P36160	344 aa	Known RBP	5.19	□□□□□ -1.58
NUP1	YOR098C	RPL32	P38061	130 aa	Known RBP	5.19	□□□□□ -1.58
NUP1	YOR098C	STN1	P38960	494 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	RPN11	P43588	306 aa	Known RBP	5.19	□□□□□ -1.58
NUP1	YOR098C	LPX1	Q12405	387 aa	Known RBP	5.19	□□□□□ -1.58
NUP1	YOR098C	PAA1	Q12447	191 aa	Known RBP	5.19	□□□□□ -1.58
NUP1	YOR098C	THR4	P16120	514 aa	Known RBP	5.19	□□□□□ -1.58
NUP1	YOR098C	RPC34	P32910	317 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	YPT10	P38146	199 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	DUG2	P38149	878 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	OLA1	P38219	394 aa	Known RBP	5.19	□□□□□ -1.58
NUP1	YOR098C	CTS2	Q06350	511 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	MRPL35	Q06678	367 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	PUS9	Q12069	462 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	RAD1	P06777	1100 aa		5.19	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms