RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeast

Gene SHR5, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHR5	YOL110W	PEX3	P28795	441 aa		13.73	□□□□□ -0.21
SHR5	YOL110W	CTS1	P29029	562 aa		13.73	□□□□□ -0.21
SHR5	YOL110W	NTH1	P32356	751 aa		13.73	□□□□□ -0.21
SHR5	YOL110W	OAR1	P35731	278 aa		13.73	□□□□□ -0.21
SHR5	YOL110W	RCK1	P38622	512 aa		13.73	□□□□□ -0.21
SHR5	YOL110W	HOC1	P47124	396 aa		13.73	□□□□□ -0.21
SHR5	YOL110W	RIM21	P48565	533 aa		13.73	□□□□□ -0.21
SHR5	YOL110W	TOM22	P49334	152 aa		13.73	□□□□□ -0.21
SHR5	YOL110W	DIC1	Q06143	298 aa		13.73	□□□□□ -0.21
SHR5	YOL110W	YLR030W	Q07967	263 aa		13.73	□□□□□ -0.21
SHR5	YOL110W	YLR036C	Q07986	203 aa		13.73	□□□□□ -0.21
SHR5	YOL110W	MMT2	Q08970	484 aa		13.73	□□□□□ -0.21
SHR5	YOL110W	PRP2	P20095	876 aa	Predicted RBP	13.72	□□□□□ -0.21
SHR5	YOL110W	SKG1	P36169	355 aa		13.72	□□□□□ -0.21
SHR5	YOL110W	MED8	P38304	223 aa		13.72	□□□□□ -0.21
SHR5	YOL110W	STP2	P38704	541 aa		13.72	□□□□□ -0.21
SHR5	YOL110W	RPL10	P41805	221 aa	Known RBP	13.72	□□□□□ -0.21
SHR5	YOL110W	YNL095C	P53932	642 aa		13.72	□□□□□ -0.21
SHR5	YOL110W	SED5	Q01590	340 aa		13.72	□□□□□ -0.21
SHR5	YOL110W	PEX12	Q04370	399 aa		13.72	□□□□□ -0.21
SHR5	YOL110W	GLO4	Q12320	285 aa		13.72	□□□□□ -0.21
SHR5	YOL110W	COR1	P07256	457 aa		13.71	□□□□□ -0.21
SHR5	YOL110W	YAK1	P14680	807 aa		13.71	□□□□□ -0.21
SHR5	YOL110W	UGP1	P32861	499 aa	Known RBP	13.71	□□□□□ -0.21
SHR5	YOL110W	IBA57	P47158	497 aa		13.71	□□□□□ -0.21
SHR5	YOL110W	YKU80	Q04437	629 aa		13.71	□□□□□ -0.21
SHR5	YOL110W	ATG38	Q05789	226 aa	Known RBP	13.71	□□□□□ -0.21
SHR5	YOL110W	HTA1	P04911	132 aa	Known RBP	13.7	□□□□□ -0.22
SHR5	YOL110W	RAD7	P06779	565 aa		13.7	□□□□□ -0.22
SHR5	YOL110W	YAP1	P19880	650 aa	Known RBP	13.7	□□□□□ -0.22
SHR5	YOL110W	CMK2	P22517	447 aa		13.7	□□□□□ -0.22
SHR5	YOL110W	TAH1	P25638	111 aa	Predicted RBP	13.7	□□□□□ -0.22
SHR5	YOL110W	PTC2	P39966	464 aa	Known RBP	13.7	□□□□□ -0.22
SHR5	YOL110W	LAS21	P40367	830 aa		13.7	□□□□□ -0.22
SHR5	YOL110W	RIC1	P40395	1056 aa		13.7	□□□□□ -0.22
SHR5	YOL110W	CFD1	P40558	293 aa		13.7	□□□□□ -0.22
SHR5	YOL110W	YNR068C	P53754	272 aa		13.7	□□□□□ -0.22
SHR5	YOL110W	GPI11	Q06636	219 aa		13.7	□□□□□ -0.22
SHR5	YOL110W	GIC2	Q06648	383 aa		13.7	□□□□□ -0.22
SHR5	YOL110W	NSI1	Q12457	570 aa		13.7	□□□□□ -0.22
SHR5	YOL110W	VPS33	P20795	691 aa		13.69	□□□□□ -0.22
SHR5	YOL110W	NPR1	P22211	790 aa		13.69	□□□□□ -0.22
SHR5	YOL110W	SPB1	P25582	841 aa	Predicted RBP	13.69	□□□□□ -0.22
SHR5	YOL110W	DOA1	P36037	715 aa		13.69	□□□□□ -0.22
SHR5	YOL110W	SCO2	P38072	301 aa		13.69	□□□□□ -0.22
SHR5	YOL110W	YBR241C	P38142	488 aa		13.69	□□□□□ -0.22
SHR5	YOL110W	ARF3	P40994	183 aa	RIP-Chip data	13.69	□□□□□ -0.22	not detected
SHR5	YOL110W	DUG1	P43616	481 aa	Known RBP	13.69	□□□□□ -0.22
SHR5	YOL110W	RQC1	Q05468	723 aa	Known RBP	13.69	□□□□□ -0.22
SHR5	YOL110W	TEN1	Q07921	160 aa		13.69	□□□□□ -0.22
SHR5	YOL110W	BSC6	Q08280	497 aa		13.69	□□□□□ -0.22
SHR5	YOL110W	YJU2	P28320	278 aa	Predicted RBP	13.68	□□□□□ -0.22
SHR5	YOL110W	AST1	P35183	429 aa		13.68	□□□□□ -0.22
SHR5	YOL110W	YRO2	P38079	344 aa		13.68	□□□□□ -0.22
SHR5	YOL110W	FAA3	P39002	694 aa		13.68	□□□□□ -0.22
SHR5	YOL110W	AIM2	P39721	246 aa		13.68	□□□□□ -0.22
SHR5	YOL110W	PAC10	P48363	199 aa		13.68	□□□□□ -0.22
SHR5	YOL110W	OAZ1	Q02803	292 aa		13.68	□□□□□ -0.22
SHR5	YOL110W	SIZ1	Q04195	904 aa		13.68	□□□□□ -0.22
SHR5	YOL110W	ARR1	Q06596	294 aa		13.68	□□□□□ -0.22
SHR5	YOL110W	PSY3	Q12318	242 aa		13.68	□□□□□ -0.22
SHR5	YOL110W	PFK27	Q12471	397 aa	Predicted RBP	13.68	□□□□□ -0.22
SHR5	YOL110W	MHF2	Q3E829	80 aa		13.68	□□□□□ -0.22
SHR5	YOL110W	MDM12	Q92328	271 aa		13.68	□□□□□ -0.22
SHR5	YOL110W	SLH1	P53327	1967 aa	Known RBP	13.68	□□□□□ -0.22
SHR5	YOL110W	GAL3	P13045	520 aa		13.67	□□□□□ -0.22
SHR5	YOL110W	CLB3	P24870	427 aa		13.67	□□□□□ -0.22
SHR5	YOL110W	IMG1	P25626	169 aa		13.67	□□□□□ -0.22
SHR5	YOL110W	CDC12	P32468	407 aa	Known RBP	13.67	□□□□□ -0.22
SHR5	YOL110W	DLD3	P39976	496 aa	Known RBP	13.67	□□□□□ -0.22
SHR5	YOL110W	LYS12	P40495	371 aa	Known RBP	13.67	□□□□□ -0.22
SHR5	YOL110W	ALK1	P43633	760 aa	Known RBP	13.67	□□□□□ -0.22
SHR5	YOL110W	NRM1	P53718	249 aa		13.67	□□□□□ -0.22
SHR5	YOL110W	SKI8	Q02793	397 aa	Predicted RBP	13.67	□□□□□ -0.22
SHR5	YOL110W	THP1	Q08231	455 aa		13.67	□□□□□ -0.22
SHR5	YOL110W	YCL049C	P25577	312 aa		13.66	□□□□□ -0.22
SHR5	YOL110W	ARP2	P32381	391 aa	Known RBP	13.66	□□□□□ -0.22
SHR5	YOL110W	TSL1	P38427	1098 aa	Known RBP	13.66	□□□□□ -0.22
SHR5	YOL110W	PRP39	P39682	629 aa	Known RBP	13.66	□□□□□ -0.22
SHR5	YOL110W	RBG1	P39729	369 aa		13.66	□□□□□ -0.22
SHR5	YOL110W	RSP5	P39940	809 aa	Known RBP	13.66	□□□□□ -0.22
SHR5	YOL110W	MRPS18	P42847	217 aa		13.66	□□□□□ -0.22
SHR5	YOL110W	MSB1	P21339	1137 aa	Known RBP	13.65	□□□□□ -0.22
SHR5	YOL110W	YHL012W	P38709	493 aa		13.65	□□□□□ -0.22
SHR5	YOL110W	YHR177W	P38867	453 aa		13.65	□□□□□ -0.22
SHR5	YOL110W	RHO4	Q00246	291 aa		13.65	□□□□□ -0.22
SHR5	YOL110W	PIN2	Q12057	282 aa		13.65	□□□□□ -0.22
SHR5	YOL110W	YDR061W	Q12298	539 aa		13.65	□□□□□ -0.22
SHR5	YOL110W	IRA2	P19158	3079 aa		13.65	□□□□□ -0.22
SHR5	YOL110W	MRPL32	P25348	183 aa		13.64	□□□□□ -0.23
SHR5	YOL110W	YMC1	P32331	307 aa		13.64	□□□□□ -0.23
SHR5	YOL110W	TAF14	P35189	244 aa		13.64	□□□□□ -0.23
SHR5	YOL110W	ATG14	P38270	344 aa		13.64	□□□□□ -0.23
SHR5	YOL110W	FAU1	P40099	211 aa		13.64	□□□□□ -0.23
SHR5	YOL110W	ATP22	P50273	684 aa	Predicted RBP	13.64	□□□□□ -0.23
SHR5	YOL110W	RMR1	P53060	241 aa		13.64	□□□□□ -0.23
SHR5	YOL110W	ISR1	Q06098	443 aa	Known RBP	13.64	□□□□□ -0.23
SHR5	YOL110W	YTM1	Q12024	460 aa	Predicted RBP	13.64	□□□□□ -0.23
SHR5	YOL110W	WTM1	Q12363	437 aa	Known RBP	13.64	□□□□□ -0.23
SHR5	YOL110W	YDL199C	Q12407	687 aa		13.64	□□□□□ -0.23

Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms