RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C TRM8Q12009 286 aa8.29□□□□□ -1.08
RPD3YNL330C SMF3Q12078 473 aaPredicted RBP8.29□□□□□ -1.08
RPD3YNL330C YPR096CO13587 100 aa8.28□□□□□ -1.08
RPD3YNL330C PBS2P08018 668 aa8.28□□□□□ -1.08
RPD3YNL330C SWI5P08153 709 aa8.28□□□□□ -1.08
RPD3YNL330C MSF1P08425 469 aa8.28□□□□□ -1.08
RPD3YNL330C IDP1P21954 428 aaKnown RBP8.28□□□□□ -1.08
RPD3YNL330C RER1P25560 188 aa8.28□□□□□ -1.08
RPD3YNL330C RSC6P25632 483 aa8.28□□□□□ -1.08
RPD3YNL330C CAT2P32796 670 aaKnown RBP8.28□□□□□ -1.08
RPD3YNL330C SPO23P33757 523 aa8.28□□□□□ -1.08
RPD3YNL330C GPX2P38143 162 aa8.28□□□□□ -1.08
RPD3YNL330C VMA22P38784 181 aa8.28□□□□□ -1.08
RPD3YNL330C GIC1P38785 314 aa8.28□□□□□ -1.08
RPD3YNL330C TIM17P39515 158 aa8.28□□□□□ -1.08
RPD3YNL330C GDH3P39708 457 aa8.28□□□□□ -1.08
RPD3YNL330C CAK1P43568 368 aaPredicted RBP8.28□□□□□ -1.08
RPD3YNL330C RET2P43621 546 aa8.28□□□□□ -1.08
RPD3YNL330C MSE1P48525 536 aa8.28□□□□□ -1.08
RPD3YNL330C ARO8P53090 500 aaKnown RBP8.28□□□□□ -1.08
RPD3YNL330C YGR168CP53293 376 aa8.28□□□□□ -1.08
RPD3YNL330C PNG1Q02890 363 aa8.28□□□□□ -1.08
RPD3YNL330C GIP3Q03016 1276 aa8.28□□□□□ -1.08
RPD3YNL330C YMR178WQ03219 274 aaKnown RBP8.28□□□□□ -1.08
RPD3YNL330C PLP1Q04004 230 aa8.28□□□□□ -1.08
RPD3YNL330C SPO77Q06134 477 aa8.28□□□□□ -1.08
RPD3YNL330C SFM1Q12314 213 aa8.28□□□□□ -1.08
RPD3YNL330C UBR1P19812 1950 aa8.27□□□□□ -1.09
RPD3YNL330C LAT1P12695 482 aaKnown RBP8.27□□□□□ -1.09
RPD3YNL330C TRM1P15565 570 aaKnown RBP8.27□□□□□ -1.09
RPD3YNL330C EPT1P22140 391 aa8.27□□□□□ -1.09
RPD3YNL330C PTC6P25646 442 aa8.27□□□□□ -1.09
RPD3YNL330C ATP11P32453 318 aa8.27□□□□□ -1.09
RPD3YNL330C HXT4P32467 576 aa8.27□□□□□ -1.09
RPD3YNL330C RPF2P36160 344 aaKnown RBP8.27□□□□□ -1.09
RPD3YNL330C SOL2P37262 315 aa8.27□□□□□ -1.09
RPD3YNL330C YHR033WP38690 423 aa8.27□□□□□ -1.09
RPD3YNL330C YHR219WP38900 624 aa8.27□□□□□ -1.09
RPD3YNL330C HXT6P39003 570 aaKnown RBP8.27□□□□□ -1.09
RPD3YNL330C HXT7P39004 570 aa8.27□□□□□ -1.09
RPD3YNL330C DLD3P39976 496 aaKnown RBP8.27□□□□□ -1.09
RPD3YNL330C PRE6P40303 254 aaKnown RBP8.27□□□□□ -1.09
RPD3YNL330C NTA1P40354 457 aa8.27□□□□□ -1.09
RPD3YNL330C LAS21P40367 830 aa8.27□□□□□ -1.09
RPD3YNL330C SSY5P47002 699 aa8.27□□□□□ -1.09
RPD3YNL330C CPR8P53728 308 aa8.27□□□□□ -1.09
RPD3YNL330C MAK3Q03503 176 aa8.27□□□□□ -1.09
RPD3YNL330C SEG1Q04279 960 aa8.27□□□□□ -1.09
RPD3YNL330C ARG7Q04728 441 aa8.27□□□□□ -1.09
RPD3YNL330C NOP12Q08208 459 aaKnown RBP8.27□□□□□ -1.09
RPD3YNL330C CLP1Q08685 445 aaPredicted RBP8.27□□□□□ -1.09
RPD3YNL330C SAM4Q08985 325 aaKnown RBP8.27□□□□□ -1.09
RPD3YNL330C RGT2Q12300 763 aa8.27□□□□□ -1.09
RPD3YNL330C CLN2P20438 545 aa8.26□□□□□ -1.09
RPD3YNL330C SLM5P25345 492 aaKnown RBP8.26□□□□□ -1.09
RPD3YNL330C RRP7P25368 297 aaPredicted RBP8.26□□□□□ -1.09
RPD3YNL330C JHD1P40034 492 aa8.26□□□□□ -1.09
RPD3YNL330C YJL043WP47053 257 aa8.26□□□□□ -1.09
RPD3YNL330C RIM21P48565 533 aa8.26□□□□□ -1.09
RPD3YNL330C MUP1P50276 574 aa8.26□□□□□ -1.09
RPD3YNL330C YNL181WP53878 407 aa8.26□□□□□ -1.09
RPD3YNL330C YPL071CQ02864 156 aa8.26□□□□□ -1.09
RPD3YNL330C YMR034CQ05131 434 aaPredicted RBP8.26□□□□□ -1.09
RPD3YNL330C YPS7Q06325 596 aa8.26□□□□□ -1.09
RPD3YNL330C ACF2Q12168 779 aa8.26□□□□□ -1.09
RPD3YNL330C TSC13Q99190 310 aa8.26□□□□□ -1.09
RPD3YNL330C TFS1P14306 219 aa8.25□□□□□ -1.09
RPD3YNL330C VPS33P20795 691 aa8.25□□□□□ -1.09
RPD3YNL330C CHA1P25379 360 aaKnown RBP8.25□□□□□ -1.09
RPD3YNL330C SYP1P25623 870 aaKnown RBP8.25□□□□□ -1.09
RPD3YNL330C HIR2P32480 875 aa8.25□□□□□ -1.09
RPD3YNL330C LOT5P34234 306 aa8.25□□□□□ -1.09
RPD3YNL330C BAP2P38084 609 aa8.25□□□□□ -1.09
RPD3YNL330C SEA4P38164 1038 aa8.25□□□□□ -1.09
RPD3YNL330C INM1P38710 295 aa8.25□□□□□ -1.09
RPD3YNL330C YHR127WP38833 243 aaKnown RBP8.25□□□□□ -1.09
RPD3YNL330C HEM14P40012 539 aa8.25□□□□□ -1.09
RPD3YNL330C RRG9P40156 214 aa8.25□□□□□ -1.09
RPD3YNL330C NDE1P40215 560 aa8.25□□□□□ -1.09
RPD3YNL330C SSU1P41930 458 aa8.25□□□□□ -1.09
RPD3YNL330C YGR201CP42936 225 aa8.25□□□□□ -1.09
RPD3YNL330C YFL066CP43538 392 aa8.25□□□□□ -1.09
RPD3YNL330C PMT4P46971 762 aa8.25□□□□□ -1.09
RPD3YNL330C SWC4P53201 476 aa8.25□□□□□ -1.09
RPD3YNL330C OAZ1Q02803 292 aa8.25□□□□□ -1.09
RPD3YNL330C YPL034WQ03083 165 aa8.25□□□□□ -1.09
RPD3YNL330C TRM82Q03774 444 aa8.25□□□□□ -1.09
RPD3YNL330C YLR257WQ06146 321 aaKnown RBP8.25□□□□□ -1.09
RPD3YNL330C YPR196WQ06595 470 aa8.25□□□□□ -1.09
RPD3YNL330C YBL113CQ7M4S9 792 aa8.25□□□□□ -1.09
RPD3YNL330C ALG7P07286 448 aa8.24□□□□□ -1.09
RPD3YNL330C CAP2P13517 287 aa8.24□□□□□ -1.09
RPD3YNL330C SAM35P14693 329 aa8.24□□□□□ -1.09
RPD3YNL330C MER1P16523 270 aa8.24□□□□□ -1.09
RPD3YNL330C MDH1P17505 334 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09not detected
RPD3YNL330C DBP3P20447 523 aaKnown RBP8.24□□□□□ -1.09
RPD3YNL330C PHO84P25297 587 aaKnown RBP8.24□□□□□ -1.09
RPD3YNL330C PMT1P33775 817 aa8.24□□□□□ -1.09
RPD3YNL330C PXA2P34230 853 aa8.24□□□□□ -1.09
RPD3YNL330C CLG1P35190 452 aa8.24□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms