RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W TY1A-ER2P0CX66 440 aa5.66□□□□□ -1.5
ATG4YNL223W TY1A-GR3P0CX67 440 aa5.66□□□□□ -1.5
ATG4YNL223W TY1A-LR1P0CX68 440 aa5.66□□□□□ -1.5
ATG4YNL223W TY1A-MR2P0CX69 440 aa5.66□□□□□ -1.5
ATG4YNL223W LAT1P12695 482 aaKnown RBP5.66□□□□□ -1.5
ATG4YNL223W RPS17BP14127 136 aaKnown RBP5.66□□□□□ -1.5
ATG4YNL223W PPH21P23594 369 aa5.66□□□□□ -1.5
ATG4YNL223W ADE1P27616 306 aa5.66□□□□□ -1.5
ATG4YNL223W PTP2P29461 750 aa5.66□□□□□ -1.5
ATG4YNL223W NUP2P32499 720 aa5.66□□□□□ -1.5
ATG4YNL223W TSL1P38427 1098 aaKnown RBP5.66□□□□□ -1.5
ATG4YNL223W STP2P38704 541 aa5.66□□□□□ -1.5
ATG4YNL223W TDA11P38854 504 aa5.66□□□□□ -1.5
ATG4YNL223W YEL020CP39994 560 aa5.66□□□□□ -1.5
ATG4YNL223W LAS21P40367 830 aa5.66□□□□□ -1.5
ATG4YNL223W MAD2P40958 196 aa5.66□□□□□ -1.5
ATG4YNL223W PSA1P41940 361 aaKnown RBP5.66□□□□□ -1.5
ATG4YNL223W ZIM17P42844 174 aa5.66□□□□□ -1.5
ATG4YNL223W PRM10P42946 383 aa5.66□□□□□ -1.5
ATG4YNL223W TY1A-JR2P47099 440 aa5.66□□□□□ -1.5
ATG4YNL223W MNN10P50108 393 aaKnown RBP5.66□□□□□ -1.5
ATG4YNL223W SDT1P53078 280 aa5.66□□□□□ -1.5
ATG4YNL223W NIS1P53939 407 aa5.66□□□□□ -1.5
ATG4YNL223W TY1A-DR1Q03856 440 aa5.66□□□□□ -1.5
ATG4YNL223W TY1A-ML1Q04706 440 aaKnown RBP5.66□□□□□ -1.5
ATG4YNL223W TY1A-BRQ12217 440 aa5.66□□□□□ -1.5
ATG4YNL223W YOR114WQ12219 294 aa5.66□□□□□ -1.5
ATG4YNL223W TY1A-NL2Q12470 440 aa5.66□□□□□ -1.5
ATG4YNL223W TY1A-GR2Q12485 440 aa5.66□□□□□ -1.5
ATG4YNL223W NKP1Q12493 238 aa5.66□□□□□ -1.5
ATG4YNL223W TIM9O74700 87 aa5.65□□□□□ -1.5
ATG4YNL223W COX3P00420 269 aa5.65□□□□□ -1.5
ATG4YNL223W CMP2P14747 604 aa5.65□□□□□ -1.5
ATG4YNL223W SEC2P17065 759 aa5.65□□□□□ -1.5
ATG4YNL223W TYR1P20049 452 aa5.65□□□□□ -1.5
ATG4YNL223W UBC8P28263 218 aa5.65□□□□□ -1.5
ATG4YNL223W CTS1P29029 562 aa5.65□□□□□ -1.5
ATG4YNL223W NTR2P36118 322 aaPredicted RBP5.65□□□□□ -1.5
ATG4YNL223W PIM1P36775 1133 aa5.65□□□□□ -1.5
ATG4YNL223W YBR285WP38354 144 aa5.65□□□□□ -1.5
ATG4YNL223W PLB1P39105 664 aa5.65□□□□□ -1.5
ATG4YNL223W YAL037WP39728 267 aa5.65□□□□□ -1.5
ATG4YNL223W THO1P40040 218 aaKnown RBP5.65□□□□□ -1.5
ATG4YNL223W MPH1P40562 993 aa5.65□□□□□ -1.5
ATG4YNL223W TOM22P49334 152 aa5.65□□□□□ -1.5
ATG4YNL223W MTQ2Q03920 221 aaPredicted RBP5.65□□□□□ -1.5
ATG4YNL223W YDR444WQ04093 687 aa5.65□□□□□ -1.5
ATG4YNL223W RRP45Q05636 305 aaKnown RBP5.65□□□□□ -1.5
ATG4YNL223W PDR8Q06149 701 aa5.65□□□□□ -1.5
ATG4YNL223W PUN1Q06991 263 aa5.65□□□□□ -1.5
ATG4YNL223W DTD1Q07648 150 aaKnown RBP5.65□□□□□ -1.5
ATG4YNL223W REX4Q08237 289 aa5.65□□□□□ -1.5
ATG4YNL223W RSA1Q08932 381 aa5.65□□□□□ -1.5
ATG4YNL223W YPR022CQ12139 1133 aa5.65□□□□□ -1.5
ATG4YNL223W YDL199CQ12407 687 aa5.65□□□□□ -1.5
ATG4YNL223W YPR117WQ06116 2489 aa5.65□□□□□ -1.5
ATG4YNL223W RED1P14291 827 aa5.64□□□□□ -1.51
ATG4YNL223W FUR1P18562 216 aaKnown RBP5.64□□□□□ -1.51
ATG4YNL223W YCL049CP25577 312 aa5.64□□□□□ -1.51
ATG4YNL223W VPH2P32341 215 aa5.64□□□□□ -1.51
ATG4YNL223W CYS4P32582 507 aaKnown RBP5.64□□□□□ -1.51
ATG4YNL223W SSO1P32867 290 aa5.64□□□□□ -1.51
ATG4YNL223W SFC1P33303 322 aa5.64□□□□□ -1.51
ATG4YNL223W APT2P36973 181 aa5.64□□□□□ -1.51
ATG4YNL223W MNN2P38069 597 aa5.64□□□□□ -1.51
ATG4YNL223W YHR033WP38690 423 aa5.64□□□□□ -1.51
ATG4YNL223W MPM1P40364 252 aa5.64□□□□□ -1.51
ATG4YNL223W YRB2P40517 327 aa5.64□□□□□ -1.51
ATG4YNL223W RAD17P48581 401 aa5.64□□□□□ -1.51
ATG4YNL223W YNR014WP53719 212 aa5.64□□□□□ -1.51
ATG4YNL223W RHO3Q00245 231 aaKnown RBP5.64□□□□□ -1.51
ATG4YNL223W MSC1Q03104 513 aa5.64□□□□□ -1.51
ATG4YNL223W GAD1Q04792 585 aa5.64□□□□□ -1.51
ATG4YNL223W YFT2Q06676 274 aa5.64□□□□□ -1.51
ATG4YNL223W TEN1Q07921 160 aa5.64□□□□□ -1.51
ATG4YNL223W RRP40Q08285 240 aaKnown RBP5.64□□□□□ -1.51
ATG4YNL223W MCA1Q08601 432 aa5.64□□□□□ -1.51
ATG4YNL223W PUS7Q08647 676 aaKnown RBP5.64□□□□□ -1.51
ATG4YNL223W VIK1Q12045 647 aa5.64□□□□□ -1.51
ATG4YNL223W DBP10Q12389 995 aaKnown RBP5.64□□□□□ -1.51
ATG4YNL223W YPR064WQ12492 139 aa5.64□□□□□ -1.51
ATG4YNL223W GPH1P06738 902 aaKnown RBP5.64□□□□□ -1.51
ATG4YNL223W FAR1P21268 830 aa5.64□□□□□ -1.51
ATG4YNL223W CTR86P25355 563 aa5.64□□□□□ -1.51
ATG4YNL223W HCM1P25364 564 aa5.64□□□□□ -1.51
ATG4YNL223W AGP1P25376 633 aa5.64□□□□□ -1.51
ATG4YNL223W SAC1P32368 623 aaKnown RBP5.64□□□□□ -1.51
ATG4YNL223W MRPL6P32904 214 aa5.64□□□□□ -1.51
ATG4YNL223W TIF3P34167 436 aaKnown RBP5.64□□□□□ -1.51
ATG4YNL223W ASC1P38011 319 aaKnown RBP5.64□□□□□ -1.51
ATG4YNL223W SCO2P38072 301 aa5.64□□□□□ -1.51
ATG4YNL223W YJL049WP47048 450 aa5.64□□□□□ -1.51
ATG4YNL223W HXT16P47185 567 aa5.64□□□□□ -1.51
ATG4YNL223W GPI8P49018 411 aa5.64□□□□□ -1.51
ATG4YNL223W ART5P53244 586 aaKnown RBP5.64□□□□□ -1.51
ATG4YNL223W ARE2P53629 642 aaKnown RBP5.64□□□□□ -1.51
ATG4YNL223W SWS2P53937 143 aa5.64□□□□□ -1.51
ATG4YNL223W HXT15P54854 567 aa5.64□□□□□ -1.51
ATG4YNL223W OAZ1Q02803 292 aa5.64□□□□□ -1.51
ATG4YNL223W RRN5Q02983 363 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms