RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W VFA1P40080 203 aa2.34□□□□□ -2.03
UBP15YMR304W PFK26P40433 827 aaKnown RBP2.34□□□□□ -2.03
UBP15YMR304W FMP33P46998 180 aa2.34□□□□□ -2.03
UBP15YMR304W HXT17P53631 564 aa2.34□□□□□ -2.03
UBP15YMR304W RPL22BP56628 122 aaKnown RBP2.34□□□□□ -2.03
UBP15YMR304W HAS1Q03532 505 aaKnown RBP2.34□□□□□ -2.03
UBP15YMR304W ACL4Q03771 387 aa2.34□□□□□ -2.03
UBP15YMR304W ATC1Q04005 294 aa2.34□□□□□ -2.03
UBP15YMR304W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
UBP15YMR304W ADF1Q2V2Q1 113 aa2.34□□□□□ -2.03
UBP15YMR304W MTR10Q99189 972 aa2.34□□□□□ -2.03
UBP15YMR304W CDC8P00572 216 aa2.34□□□□□ -2.04
UBP15YMR304W HXK1P04806 485 aaKnown RBP2.34□□□□□ -2.04
UBP15YMR304W MRP13P12686 339 aa2.34□□□□□ -2.04
UBP15YMR304W ENA1P13587 1091 aa2.34□□□□□ -2.04
UBP15YMR304W SPO7P18410 259 aa2.34□□□□□ -2.04
UBP15YMR304W BUB3P26449 341 aa2.34□□□□□ -2.04
UBP15YMR304W CRM1P30822 1084 aaKnown RBP2.34□□□□□ -2.04
UBP15YMR304W SPR1P32603 445 aa2.34□□□□□ -2.04
UBP15YMR304W YKL071WP36086 256 aa2.34□□□□□ -2.04
UBP15YMR304W NOP4P37838 685 aaKnown RBP2.34□□□□□ -2.04
UBP15YMR304W RCK1P38622 512 aa2.34□□□□□ -2.04
UBP15YMR304W NVJ1P38881 321 aa2.34□□□□□ -2.04
UBP15YMR304W SPT8P38915 602 aa2.34□□□□□ -2.04
UBP15YMR304W NTA1P40354 457 aa2.34□□□□□ -2.04
UBP15YMR304W BUD6P41697 788 aa2.34□□□□□ -2.04
UBP15YMR304W RGD2P43556 714 aa2.34□□□□□ -2.04
UBP15YMR304W PTR3P43606 678 aa2.34□□□□□ -2.04
UBP15YMR304W VPS25P47142 202 aa2.34□□□□□ -2.04
UBP15YMR304W NIT3P49954 291 aa2.34□□□□□ -2.04
UBP15YMR304W UFD1P53044 361 aa2.34□□□□□ -2.04
UBP15YMR304W TNA1P53322 534 aa2.34□□□□□ -2.04
UBP15YMR304W ZRG17P53735 605 aa2.34□□□□□ -2.04
UBP15YMR304W ENA2Q01896 1091 aa2.34□□□□□ -2.04
UBP15YMR304W AIM32Q04689 311 aa2.34□□□□□ -2.04
UBP15YMR304W YLR001CQ07895 862 aa2.34□□□□□ -2.04
UBP15YMR304W THI21Q08975 551 aa2.34□□□□□ -2.04
UBP15YMR304W PSF1Q12488 208 aa2.34□□□□□ -2.04
UBP15YMR304W ENA5Q12691 1091 aa2.34□□□□□ -2.04
UBP15YMR304W RHO2P06781 192 aa2.33□□□□□ -2.04
UBP15YMR304W RPS19AP07280 144 aaKnown RBP2.33□□□□□ -2.04
UBP15YMR304W RPS19BP07281 144 aaPredicted RBP2.33□□□□□ -2.04
UBP15YMR304W GCN3P14741 305 aa2.33□□□□□ -2.04
UBP15YMR304W SLY1P22213 666 aa2.33□□□□□ -2.04
UBP15YMR304W URE2P23202 354 aaKnown RBP2.33□□□□□ -2.04
UBP15YMR304W YKL097CP34245 136 aa2.33□□□□□ -2.04
UBP15YMR304W REI1P38344 393 aaPredicted RBP2.33□□□□□ -2.04
UBP15YMR304W JEM1P40358 645 aa2.33□□□□□ -2.04
UBP15YMR304W GLR1P41921 483 aaKnown RBP2.33□□□□□ -2.04
UBP15YMR304W HXT14P42833 540 aa2.33□□□□□ -2.04
UBP15YMR304W YJR149WP47177 404 aa2.33□□□□□ -2.04
UBP15YMR304W YJR154WP47181 346 aa2.33□□□□□ -2.04
UBP15YMR304W MND1P53102 219 aa2.33□□□□□ -2.04
UBP15YMR304W RRN9P53437 365 aa2.33□□□□□ -2.04
UBP15YMR304W TDA7P53882 636 aaPredicted RBP2.33□□□□□ -2.04
UBP15YMR304W INN1P53901 409 aa2.33□□□□□ -2.04
UBP15YMR304W ERG5P54781 538 aa2.33□□□□□ -2.04
UBP15YMR304W YDR222WQ04925 415 aa2.33□□□□□ -2.04
UBP15YMR304W ATG23Q06671 453 aa2.33□□□□□ -2.04
UBP15YMR304W THI73Q07904 523 aa2.33□□□□□ -2.04
UBP15YMR304W CSM4Q08955 156 aa2.33□□□□□ -2.04
UBP15YMR304W PGC1Q08959 321 aa2.33□□□□□ -2.04
UBP15YMR304W NMD4Q12129 218 aa2.33□□□□□ -2.04
UBP15YMR304W LEU9Q12166 604 aaKnown RBP2.33□□□□□ -2.04
UBP15YMR304W FRE7Q12333 620 aa2.33□□□□□ -2.04
UBP15YMR304W TY1A-NL1Q12391 440 aaKnown RBP2.33□□□□□ -2.04
UBP15YMR304W TMA17Q12513 150 aa2.33□□□□□ -2.04
UBP15YMR304W FSH3Q99369 266 aa2.33□□□□□ -2.04
UBP15YMR304W HTB1P02293 131 aaKnown RBP2.33□□□□□ -2.04
UBP15YMR304W HTB2P02294 131 aa2.33□□□□□ -2.04
UBP15YMR304W DCC1P25559 380 aa2.33□□□□□ -2.04
UBP15YMR304W PTC6P25646 442 aa2.33□□□□□ -2.04
UBP15YMR304W CYS3P31373 394 aaKnown RBP2.33□□□□□ -2.04
UBP15YMR304W SSH4P32343 579 aa2.33□□□□□ -2.04
UBP15YMR304W RPS1AP33442 255 aaKnown RBP2.33□□□□□ -2.04
UBP15YMR304W MCM7P38132 845 aa2.33□□□□□ -2.04
UBP15YMR304W AIM3P38266 947 aaKnown RBP2.33□□□□□ -2.04
UBP15YMR304W YNG2P38806 282 aaKnown RBP2.33□□□□□ -2.04
UBP15YMR304W FAD1P38913 306 aa2.33□□□□□ -2.04
UBP15YMR304W ALR2P43553 858 aa2.33□□□□□ -2.04
UBP15YMR304W MNT2P53059 558 aa2.33□□□□□ -2.04
UBP15YMR304W YGR042WP53227 271 aa2.33□□□□□ -2.04
UBP15YMR304W YGR151CP53287 111 aa2.33□□□□□ -2.04
UBP15YMR304W YCL001W-AP87012 153 aa2.33□□□□□ -2.04
UBP15YMR304W GPD1Q00055 391 aaKnown RBP2.33□□□□□ -2.04
UBP15YMR304W YMR321CQ04898 105 aa2.33□□□□□ -2.04
UBP15YMR304W RTT109Q07794 436 aa2.33□□□□□ -2.04
UBP15YMR304W YLL007CQ07799 665 aa2.33□□□□□ -2.04
UBP15YMR304W MCH5Q08777 521 aa2.33□□□□□ -2.04
UBP15YMR304W YPR1Q12458 312 aa2.33□□□□□ -2.04
UBP15YMR304W YFR010W-AP0C5N0 62 aa2.33□□□□□ -2.04
UBP15YMR304W MIH1P23748 554 aa2.33□□□□□ -2.04
UBP15YMR304W RNA15P25299 296 aaPredicted RBP2.33□□□□□ -2.04
UBP15YMR304W PEP3P27801 918 aa2.33□□□□□ -2.04
UBP15YMR304W SUA5P32579 426 aa2.33□□□□□ -2.04
UBP15YMR304W VPS51P36116 164 aa2.33□□□□□ -2.04
UBP15YMR304W TFA2P36145 328 aa2.33□□□□□ -2.04
UBP15YMR304W LAS1P36146 502 aaPredicted RBP2.33□□□□□ -2.04
UBP15YMR304W SKG1P36169 355 aa2.33□□□□□ -2.04
UBP15YMR304W SMF1P38925 575 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms