RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C BST1P43571 1029 aa4.46□□□□□ -1.7
EAR1YMR171C RRT6P53117 311 aaPredicted RBP4.46□□□□□ -1.7
EAR1YMR171C CPR8P53728 308 aa4.46□□□□□ -1.7
EAR1YMR171C YNL092WP53934 400 aa4.46□□□□□ -1.7
EAR1YMR171C YPL108WQ02872 168 aaPredicted RBP4.46□□□□□ -1.7
EAR1YMR171C INA17Q02888 182 aa4.46□□□□□ -1.7
EAR1YMR171C SNU56Q03782 492 aaKnown RBP4.46□□□□□ -1.7
EAR1YMR171C SMP3Q04174 516 aa4.46□□□□□ -1.7
EAR1YMR171C KRE28Q04431 385 aa4.46□□□□□ -1.7
EAR1YMR171C ORM2Q06144 216 aa4.46□□□□□ -1.7
EAR1YMR171C CDD1Q06549 142 aa4.46□□□□□ -1.7
EAR1YMR171C YOL019WQ08157 551 aa4.46□□□□□ -1.7
EAR1YMR171C ESA1Q08649 445 aa4.46□□□□□ -1.7
EAR1YMR171C CTF3Q12748 733 aa4.46□□□□□ -1.7
EAR1YMR171C SAS5Q99314 248 aa4.46□□□□□ -1.7
EAR1YMR171C VCX1Q99385 411 aa4.46□□□□□ -1.7
EAR1YMR171C CBP2P03874 630 aaPredicted RBP4.45□□□□□ -1.7
EAR1YMR171C COX4P04037 155 aa4.45□□□□□ -1.7
EAR1YMR171C MAS2P11914 482 aa4.45□□□□□ -1.7
EAR1YMR171C RPB4P20433 221 aaPredicted RBP4.45□□□□□ -1.7
EAR1YMR171C GAC1P28006 793 aa4.45□□□□□ -1.7
EAR1YMR171C PTC1P35182 281 aa4.45□□□□□ -1.7
EAR1YMR171C TPO5P36029 618 aa4.45□□□□□ -1.7
EAR1YMR171C SRL3P36167 246 aa4.45□□□□□ -1.7
EAR1YMR171C RFS1P38234 210 aaKnown RBP4.45□□□□□ -1.7
EAR1YMR171C GOS1P38736 223 aa4.45□□□□□ -1.7
EAR1YMR171C YJR061WP40355 935 aa4.45□□□□□ -1.7
EAR1YMR171C MSS2P40990 351 aa4.45□□□□□ -1.7
EAR1YMR171C QRI1P43123 477 aaKnown RBP4.45□□□□□ -1.7
EAR1YMR171C YFL040WP43562 540 aa4.45□□□□□ -1.7
EAR1YMR171C ROK1P45818 564 aaPredicted RBP4.45□□□□□ -1.7
EAR1YMR171C BNA1P47096 177 aa4.45□□□□□ -1.7
EAR1YMR171C MRK1P50873 501 aa4.45□□□□□ -1.7
EAR1YMR171C YNL095CP53932 642 aa4.45□□□□□ -1.7
EAR1YMR171C YNL033WP53964 284 aa4.45□□□□□ -1.7
EAR1YMR171C YNL019CP53975 284 aa4.45□□□□□ -1.7
EAR1YMR171C SVL3Q03088 825 aaKnown RBP4.45□□□□□ -1.7
EAR1YMR171C NHP10Q03435 203 aa4.45□□□□□ -1.7
EAR1YMR171C ENT5Q03769 411 aaKnown RBP4.45□□□□□ -1.7
EAR1YMR171C GLO2Q05584 274 aa4.45□□□□□ -1.7
EAR1YMR171C GRX8Q05926 109 aa4.45□□□□□ -1.7
EAR1YMR171C SSQ1Q05931 657 aaPredicted RBP4.45□□□□□ -1.7
EAR1YMR171C YDL121CQ07541 149 aa4.45□□□□□ -1.7
EAR1YMR171C LOT6Q07923 191 aa4.45□□□□□ -1.7
EAR1YMR171C SGT1Q08446 395 aa4.45□□□□□ -1.7
EAR1YMR171C MDY2Q12285 212 aa4.45□□□□□ -1.7
EAR1YMR171C YER175W-AQ8TGU4 54 aa4.45□□□□□ -1.7
EAR1YMR171C THP2O13539 261 aaKnown RBP4.45□□□□□ -1.7
EAR1YMR171C HEM2P05373 342 aa4.45□□□□□ -1.7
EAR1YMR171C PET122P10355 254 aa4.45□□□□□ -1.7
EAR1YMR171C APE1P14904 514 aa4.45□□□□□ -1.7
EAR1YMR171C HSP26P15992 214 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
EAR1YMR171C PMA2P19657 947 aa4.45□□□□□ -1.7
EAR1YMR171C CCA1P21269 546 aa4.45□□□□□ -1.7
EAR1YMR171C YUR1P26725 428 aa4.45□□□□□ -1.7
EAR1YMR171C PHO91P27514 894 aa4.45□□□□□ -1.7
EAR1YMR171C MSS51P32335 436 aa4.45□□□□□ -1.7
EAR1YMR171C RPN2P32565 945 aaKnown RBP4.45□□□□□ -1.7
EAR1YMR171C RGT1P32862 1170 aa4.45□□□□□ -1.7
EAR1YMR171C CSE1P33307 960 aa4.45□□□□□ -1.7
EAR1YMR171C NTR2P36118 322 aaPredicted RBP4.45□□□□□ -1.7
EAR1YMR171C YBR241CP38142 488 aa4.45□□□□□ -1.7
EAR1YMR171C MRP21P38175 177 aa4.45□□□□□ -1.7
EAR1YMR171C KAP104P38217 918 aaKnown RBP4.45□□□□□ -1.7
EAR1YMR171C IST2P38250 946 aa4.45□□□□□ -1.7
EAR1YMR171C YEL028WP39989 153 aa4.45□□□□□ -1.7
EAR1YMR171C YEL020CP39994 560 aa4.45□□□□□ -1.7
EAR1YMR171C YER186CP40101 306 aa4.45□□□□□ -1.7
EAR1YMR171C ATM1P40416 690 aa4.45□□□□□ -1.7
EAR1YMR171C AGP3P43548 558 aa4.45□□□□□ -1.7
EAR1YMR171C RPS10BP46784 105 aaKnown RBP4.45□□□□□ -1.7
EAR1YMR171C RMR1P53060 241 aa4.45□□□□□ -1.7
EAR1YMR171C KTR6P54070 446 aa4.45□□□□□ -1.7
EAR1YMR171C ARP9Q05123 467 aa4.45□□□□□ -1.7
EAR1YMR171C NDL1Q06568 189 aa4.45□□□□□ -1.7
EAR1YMR171C YDL114WQ07530 308 aa4.45□□□□□ -1.7
EAR1YMR171C YEH2Q07950 538 aa4.45□□□□□ -1.7
EAR1YMR171C DNL4Q08387 944 aaPredicted RBP4.45□□□□□ -1.7
EAR1YMR171C RPS10AQ08745 105 aaPredicted RBP4.45□□□□□ -1.7
EAR1YMR171C HER1Q12276 1246 aa4.45□□□□□ -1.7
EAR1YMR171C TOM1Q03280 3268 aa4.45□□□□□ -1.7
EAR1YMR171C ADE4P04046 510 aaKnown RBP4.44□□□□□ -1.7
EAR1YMR171C TPK1P06244 397 aa4.44□□□□□ -1.7
EAR1YMR171C POX1P13711 748 aa4.44□□□□□ -1.7
EAR1YMR171C MSS116P15424 664 aaKnown RBP4.44□□□□□ -1.7
EAR1YMR171C MET16P18408 261 aaPredicted RBP4.44□□□□□ -1.7
EAR1YMR171C URE2P23202 354 aaKnown RBP4.44□□□□□ -1.7
EAR1YMR171C YSP3P25036 478 aa4.44□□□□□ -1.7
EAR1YMR171C POL4P25615 582 aa4.44□□□□□ -1.7
EAR1YMR171C RAD16P31244 790 aa4.44□□□□□ -1.7
EAR1YMR171C VMA6P32366 345 aaKnown RBP4.44□□□□□ -1.7
EAR1YMR171C PAH1P32567 862 aa4.44□□□□□ -1.7
EAR1YMR171C MAK5P38112 773 aaPredicted RBP4.44□□□□□ -1.7
EAR1YMR171C YBL029WP38201 376 aa4.44□□□□□ -1.7
EAR1YMR171C LNP1P38878 278 aa4.44□□□□□ -1.7
EAR1YMR171C ECM10P39987 644 aa4.44□□□□□ -1.7
EAR1YMR171C YIL166CP40445 542 aa4.44□□□□□ -1.7
EAR1YMR171C VMA13P41807 478 aaKnown RBP4.44□□□□□ -1.7
EAR1YMR171C ELP2P42935 788 aa4.44□□□□□ -1.7
EAR1YMR171C GTR2P53290 341 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms