RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C DAL2P25335 343 aa3.17□□□□□ -1.9
SUB1YMR039C SPB1P25582 841 aaPredicted RBP3.17□□□□□ -1.9
SUB1YMR039C CAJ1P39101 391 aa3.17□□□□□ -1.9
SUB1YMR039C PAN6P40459 309 aa3.17□□□□□ -1.9
SUB1YMR039C TFG2P41896 400 aaPredicted RBP3.17□□□□□ -1.9
SUB1YMR039C NCA3P46955 337 aa3.17□□□□□ -1.9
SUB1YMR039C YGR016WP53209 190 aa3.17□□□□□ -1.9
SUB1YMR039C ERB1Q04660 807 aaKnown RBP3.17□□□□□ -1.9
SUB1YMR039C YRF1-4O13559 1382 aa3.16□□□□□ -1.9
SUB1YMR039C KRR1P25586 316 aaPredicted RBP3.16□□□□□ -1.9
SUB1YMR039C TIP1P27654 210 aaPredicted RBP3.16□□□□□ -1.9
SUB1YMR039C PUP2P32379 260 aa3.16□□□□□ -1.9
SUB1YMR039C CCT2P39076 527 aaKnown RBP3.16□□□□□ -1.9
SUB1YMR039C VMA13P41807 478 aaKnown RBP3.16□□□□□ -1.9
SUB1YMR039C SHY1P53266 389 aa3.16□□□□□ -1.9
SUB1YMR039C DSL1P53847 754 aa3.16□□□□□ -1.9
SUB1YMR039C MEH1Q02205 184 aa3.16□□□□□ -1.9
SUB1YMR039C YMR181CQ03231 154 aa3.16□□□□□ -1.9
SUB1YMR039C YLR345WQ06137 509 aa3.16□□□□□ -1.9
SUB1YMR039C WTM1Q12363 437 aaKnown RBP3.16□□□□□ -1.9
SUB1YMR039C HIF1Q12373 385 aa3.16□□□□□ -1.9
SUB1YMR039C YOL159C-AQ3E769 90 aa3.16□□□□□ -1.9
SUB1YMR039C SPS4P09937 338 aa3.15□□□□□ -1.91
SUB1YMR039C MDH1P17505 334 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
SUB1YMR039C CLB1P24868 471 aa3.15□□□□□ -1.91
SUB1YMR039C YCR051WP25631 222 aa3.15□□□□□ -1.91
SUB1YMR039C ECM25P32525 599 aa3.15□□□□□ -1.91
SUB1YMR039C MDL1P33310 695 aa3.15□□□□□ -1.91
SUB1YMR039C SAS3P34218 831 aa3.15□□□□□ -1.91
SUB1YMR039C RXT2P38255 430 aa3.15□□□□□ -1.91
SUB1YMR039C GDI1P39958 451 aaKnown RBP3.15□□□□□ -1.91
SUB1YMR039C LAM5P43560 674 aa3.15□□□□□ -1.91
SUB1YMR039C BUD27P43573 796 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
SUB1YMR039C YJL055WP47044 245 aa3.15□□□□□ -1.91
SUB1YMR039C PCP1P53259 346 aa3.15□□□□□ -1.91
SUB1YMR039C HXT11P54862 567 aa3.15□□□□□ -1.91
SUB1YMR039C RSN1Q03516 953 aa3.15□□□□□ -1.91
SUB1YMR039C AIM32Q04689 311 aa3.15□□□□□ -1.91
SUB1YMR039C TIM18Q08749 192 aa3.15□□□□□ -1.91
SUB1YMR039C FDH1Q08911 376 aa3.15□□□□□ -1.91
SUB1YMR039C PKH2Q12236 1081 aaKnown RBP3.15□□□□□ -1.91
SUB1YMR039C RPL3P14126 387 aaKnown RBP3.14□□□□□ -1.91
SUB1YMR039C PPH22P23595 377 aa3.14□□□□□ -1.91
SUB1YMR039C PRP21P32524 280 aaPredicted RBP3.14□□□□□ -1.91
SUB1YMR039C NIP100P33420 868 aa3.14□□□□□ -1.91
SUB1YMR039C APE3P37302 537 aaKnown RBP3.14□□□□□ -1.91
SUB1YMR039C MSG5P38590 489 aa3.14□□□□□ -1.91
SUB1YMR039C SEC28P40509 296 aaKnown RBP3.14□□□□□ -1.91
SUB1YMR039C ATP22P50273 684 aaPredicted RBP3.14□□□□□ -1.91
SUB1YMR039C MNP1P53163 194 aaPredicted RBP3.14□□□□□ -1.91
SUB1YMR039C HSP31Q04432 237 aa3.14□□□□□ -1.91
SUB1YMR039C VTA1Q06263 330 aa3.14□□□□□ -1.91
SUB1YMR039C YPR022CQ12139 1133 aa3.14□□□□□ -1.91
SUB1YMR039C HIS4P00815 799 aaKnown RBP3.13□□□□□ -1.91
SUB1YMR039C CPR2P23285 205 aa3.13□□□□□ -1.91
SUB1YMR039C MNE1P24720 663 aa3.13□□□□□ -1.91
SUB1YMR039C DLD2P46681 530 aaKnown RBP3.13□□□□□ -1.91
SUB1YMR039C ECM27P47144 725 aa3.13□□□□□ -1.91
SUB1YMR039C YNR048WP53740 393 aa3.13□□□□□ -1.91
SUB1YMR039C KTR5P53966 522 aaPredicted RBP3.13□□□□□ -1.91
SUB1YMR039C RPA49Q01080 415 aaPredicted RBP3.13□□□□□ -1.91
SUB1YMR039C KAP120Q02932 1032 aa3.13□□□□□ -1.91
SUB1YMR039C PEX25Q02969 394 aa3.13□□□□□ -1.91
SUB1YMR039C PPM1Q04081 328 aa3.13□□□□□ -1.91
SUB1YMR039C YDR387CQ04162 555 aa3.13□□□□□ -1.91
SUB1YMR039C PAR32Q12515 295 aaKnown RBP3.13□□□□□ -1.91
SUB1YMR039C YLR278CQ05854 1341 aa3.13□□□□□ -1.91
SUB1YMR039C RPS8AP0CX39 200 aaKnown RBP3.12□□□□□ -1.91
SUB1YMR039C RPS8BP0CX40 200 aaKnown RBP3.12□□□□□ -1.91
SUB1YMR039C URA7P28274 579 aaKnown RBP3.12□□□□□ -1.91
SUB1YMR039C ITR1P30605 584 aa3.12□□□□□ -1.91
SUB1YMR039C TFB1P32776 642 aa3.12□□□□□ -1.91
SUB1YMR039C MNS1P32906 549 aa3.12□□□□□ -1.91
SUB1YMR039C VHC1P38329 1120 aa3.12□□□□□ -1.91
SUB1YMR039C LCB2P40970 561 aa3.12□□□□□ -1.91
SUB1YMR039C ZIM17P42844 174 aa3.12□□□□□ -1.91
SUB1YMR039C CAK1P43568 368 aaPredicted RBP3.12□□□□□ -1.91
SUB1YMR039C MTM1P53320 366 aa3.12□□□□□ -1.91
SUB1YMR039C YIF1P53845 314 aaKnown RBP3.12□□□□□ -1.91
SUB1YMR039C BNI5P53890 448 aaKnown RBP3.12□□□□□ -1.91
SUB1YMR039C AFI1Q99222 893 aa3.12□□□□□ -1.91
SUB1YMR039C GPH1P06738 902 aaKnown RBP3.11□□□□□ -1.91
SUB1YMR039C RPI1P23250 407 aaKnown RBP3.11□□□□□ -1.91
SUB1YMR039C APE2P32454 952 aaKnown RBP3.11□□□□□ -1.91
SUB1YMR039C HCS1P34243 683 aa3.11□□□□□ -1.91
SUB1YMR039C YBR137WP38276 179 aa3.11□□□□□ -1.91
SUB1YMR039C FRE4P53746 719 aa3.11□□□□□ -1.91
SUB1YMR039C CWC25P53854 179 aaKnown RBP3.11□□□□□ -1.91
SUB1YMR039C OAZ1Q02803 292 aa3.11□□□□□ -1.91
SUB1YMR039C TSA2Q04120 196 aa3.11□□□□□ -1.91
SUB1YMR039C ROY1Q04847 553 aa3.11□□□□□ -1.91
SUB1YMR039C SGT1Q08446 395 aa3.11□□□□□ -1.91
SUB1YMR039C PGC1Q08959 321 aa3.11□□□□□ -1.91
SUB1YMR039C SMF3Q12078 473 aaPredicted RBP3.11□□□□□ -1.91
SUB1YMR039C TRP1P00912 224 aa3.1□□□□□ -1.91
SUB1YMR039C ARG4P04076 463 aaPredicted RBP3.1□□□□□ -1.91
SUB1YMR039C RIP1P08067 215 aa3.1□□□□□ -1.91
SUB1YMR039C NFT1P0CE68 1218 aa3.1□□□□□ -1.91
SUB1YMR039C VMA2P16140 517 aaKnown RBP3.1□□□□□ -1.91
SUB1YMR039C SRV2P17555 526 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms