RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W SIP2P34164 415 aaKnown RBP4.68□□□□□ -1.66
VPS36YLR417W FRE2P36033 711 aa4.68□□□□□ -1.66
VPS36YLR417W STN1P38960 494 aa4.68□□□□□ -1.66
VPS36YLR417W POP2P39008 433 aa4.68□□□□□ -1.66
VPS36YLR417W PIB2P53191 635 aa4.68□□□□□ -1.66
VPS36YLR417W SCW4P53334 386 aaKnown RBP4.68□□□□□ -1.66
VPS36YLR417W RLI1Q03195 608 aaKnown RBP4.68□□□□□ -1.66
VPS36YLR417W YMR034CQ05131 434 aaPredicted RBP4.68□□□□□ -1.66
VPS36YLR417W DBP9Q06218 594 aaKnown RBP4.68□□□□□ -1.66
VPS36YLR417W REX4Q08237 289 aa4.68□□□□□ -1.66
VPS36YLR417W CSR2Q12734 1121 aa4.68□□□□□ -1.66
VPS36YLR417W RRP4P38792 359 aaKnown RBP4.67□□□□□ -1.66
VPS36YLR417W YAL037WP39728 267 aa4.67□□□□□ -1.66
VPS36YLR417W YPS6P40583 537 aa4.67□□□□□ -1.66
VPS36YLR417W CHS6P40955 746 aa4.67□□□□□ -1.66
VPS36YLR417W DIM1P41819 318 aaKnown RBP4.67□□□□□ -1.66
VPS36YLR417W YIP1P53039 248 aa4.67□□□□□ -1.66
VPS36YLR417W YDR541CQ03049 344 aa4.67□□□□□ -1.66
VPS36YLR417W NSE1Q07913 336 aa4.67□□□□□ -1.66
VPS36YLR417W MYO2P19524 1574 aaKnown RBP4.67□□□□□ -1.66
VPS36YLR417W YAR066WP0CX18 203 aa4.66□□□□□ -1.66
VPS36YLR417W YHR214WP0CX19 203 aa4.66□□□□□ -1.66
VPS36YLR417W CTR86P25355 563 aa4.66□□□□□ -1.66
VPS36YLR417W TRS65P32893 560 aa4.66□□□□□ -1.66
VPS36YLR417W ATO2P32907 282 aa4.66□□□□□ -1.66
VPS36YLR417W ARC40P38328 384 aaKnown RBP4.66□□□□□ -1.66
VPS36YLR417W GWT1P47026 490 aa4.66□□□□□ -1.66
VPS36YLR417W RPM2Q02773 1202 aa4.66□□□□□ -1.66
VPS36YLR417W GIP3Q03016 1276 aa4.66□□□□□ -1.66
VPS36YLR417W YLL056CQ12177 298 aa4.66□□□□□ -1.66
VPS36YLR417W NUP170P38181 1502 aa4.66□□□□□ -1.66
VPS36YLR417W MYO4P32492 1471 aa4.66□□□□□ -1.66
VPS36YLR417W PAN1P32521 1480 aa4.66□□□□□ -1.66
VPS36YLR417W YCR100CP25606 316 aa4.66□□□□□ -1.66
VPS36YLR417W YEL043WP32618 956 aa4.66□□□□□ -1.66
VPS36YLR417W PCF11P39081 626 aaPredicted RBP4.66□□□□□ -1.66
VPS36YLR417W URH1Q04179 340 aa4.66□□□□□ -1.66
VPS36YLR417W SSK2P53599 1579 aa4.66□□□□□ -1.66
VPS36YLR417W STF1P01098 86 aa4.65□□□□□ -1.67
VPS36YLR417W FAA1P30624 700 aaKnown RBP4.65□□□□□ -1.67
VPS36YLR417W YCR041WP37265 110 aa4.65□□□□□ -1.67
VPS36YLR417W RIM2P38127 377 aa4.65□□□□□ -1.67
VPS36YLR417W LYS1P38998 373 aaRIP-Chip data4.65□□□□□ -1.67not detected
VPS36YLR417W IKS1P47042 667 aa4.65□□□□□ -1.67
VPS36YLR417W BUD4P47136 1447 aa4.65□□□□□ -1.67
VPS36YLR417W HMS2P47175 358 aa4.65□□□□□ -1.67
VPS36YLR417W BRO1P48582 844 aa4.65□□□□□ -1.67
VPS36YLR417W ASN2P49090 572 aaKnown RBP4.65□□□□□ -1.67
VPS36YLR417W ODC1Q03028 310 aa4.65□□□□□ -1.67
VPS36YLR417W DIG1Q03063 452 aaKnown RBP4.65□□□□□ -1.67
VPS36YLR417W FMP42Q04991 504 aa4.65□□□□□ -1.67
VPS36YLR417W SGT1Q08446 395 aa4.65□□□□□ -1.67
VPS36YLR417W PSY3Q12318 242 aa4.65□□□□□ -1.67
VPS36YLR417W SRN2Q99176 213 aa4.65□□□□□ -1.67
VPS36YLR417W RAD57P25301 460 aa4.64□□□□□ -1.67
VPS36YLR417W PHO91P27514 894 aa4.64□□□□□ -1.67
VPS36YLR417W GPI16P38875 610 aa4.64□□□□□ -1.67
VPS36YLR417W NAS2P40555 220 aa4.64□□□□□ -1.67
VPS36YLR417W GPI15P53961 229 aa4.64□□□□□ -1.67
VPS36YLR417W SKI7Q08491 747 aaPredicted RBP4.64□□□□□ -1.67
VPS36YLR417W ATG34Q12292 412 aa4.64□□□□□ -1.67
VPS36YLR417W NBL1Q3E7Y6 73 aa4.64□□□□□ -1.67
VPS36YLR417W CYB2P00175 591 aa4.63□□□□□ -1.67
VPS36YLR417W UBA1P22515 1024 aaKnown RBP4.63□□□□□ -1.67
VPS36YLR417W CRM1P30822 1084 aaKnown RBP4.63□□□□□ -1.67
VPS36YLR417W CYS4P32582 507 aaKnown RBP4.63□□□□□ -1.67
VPS36YLR417W HAT2P39984 401 aa4.63□□□□□ -1.67
VPS36YLR417W ROG1P53118 685 aa4.63□□□□□ -1.67
VPS36YLR417W SNA4Q07549 140 aa4.63□□□□□ -1.67
VPS36YLR417W GEP3Q08622 556 aa4.63□□□□□ -1.67
VPS36YLR417W ORT1Q12375 292 aa4.63□□□□□ -1.67
VPS36YLR417W SWR1Q05471 1514 aa4.63□□□□□ -1.67
VPS36YLR417W YCR043CP25361 127 aa4.63□□□□□ -1.67
VPS36YLR417W NDI1P32340 513 aa4.63□□□□□ -1.67
VPS36YLR417W MET30P39014 640 aa4.63□□□□□ -1.67
VPS36YLR417W YIL169CP40442 995 aa4.63□□□□□ -1.67
VPS36YLR417W TES1P41903 349 aaKnown RBP4.63□□□□□ -1.67
VPS36YLR417W YIP5P53108 310 aa4.63□□□□□ -1.67
VPS36YLR417W SNT309Q06091 175 aaPredicted RBP4.63□□□□□ -1.67
VPS36YLR417W IPK1Q06667 281 aa4.63□□□□□ -1.67
VPS36YLR417W SRL1Q08673 210 aa4.63□□□□□ -1.67
VPS36YLR417W ILV5P06168 395 aaKnown RBP4.62□□□□□ -1.67
VPS36YLR417W CDC21P06785 304 aa4.62□□□□□ -1.67
VPS36YLR417W LSB5P25369 354 aa4.62□□□□□ -1.67
VPS36YLR417W NRP1P32770 719 aaKnown RBP RIP-Chip data4.62□□□□□ -1.67not detected
VPS36YLR417W PTR2P32901 601 aa4.62□□□□□ -1.67
VPS36YLR417W INM1P38710 295 aa4.62□□□□□ -1.67
VPS36YLR417W SHO1P40073 367 aa4.62□□□□□ -1.67
VPS36YLR417W PAC11P40960 533 aa4.62□□□□□ -1.67
VPS36YLR417W FRE4P53746 719 aa4.62□□□□□ -1.67
VPS36YLR417W ARK1P53974 638 aa4.62□□□□□ -1.67
VPS36YLR417W HCR1Q05775 265 aaKnown RBP4.62□□□□□ -1.67
VPS36YLR417W REX3Q12090 404 aa4.62□□□□□ -1.67
VPS36YLR417W DNA2P38859 1522 aa4.62□□□□□ -1.67
VPS36YLR417W ARG4P04076 463 aaPredicted RBP4.61□□□□□ -1.67
VPS36YLR417W CHS1P08004 1131 aa4.61□□□□□ -1.67
VPS36YLR417W NFT1P0CE68 1218 aa4.61□□□□□ -1.67
VPS36YLR417W CDC23P16522 626 aa4.61□□□□□ -1.67
VPS36YLR417W YCR022CP25620 114 aa4.61□□□□□ -1.67
VPS36YLR417W KAP104P38217 918 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms