RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C CAP2P13517 287 aa10.64□□□□□ -0.71
SPT8YLR055C MPM1P40364 252 aa10.64□□□□□ -0.71
SPT8YLR055C CSN12P47130 423 aa10.64□□□□□ -0.71
SPT8YLR055C GPI8P49018 411 aa10.64□□□□□ -0.71
SPT8YLR055C IPI3P53877 555 aa10.64□□□□□ -0.71
SPT8YLR055C ATG29Q12092 213 aa10.64□□□□□ -0.71
SPT8YLR055C YBL113CQ7M4S9 792 aa10.64□□□□□ -0.71
SPT8YLR055C MEX67Q99257 599 aaKnown RBP10.64□□□□□ -0.71
SPT8YLR055C MNE1P24720 663 aa10.63□□□□□ -0.71
SPT8YLR055C SPT14P32363 452 aa10.63□□□□□ -0.71
SPT8YLR055C SPT23P35210 1082 aa10.63□□□□□ -0.71
SPT8YLR055C YJR124CP47159 448 aa10.63□□□□□ -0.71
SPT8YLR055C FAA4P47912 694 aaKnown RBP10.63□□□□□ -0.71
SPT8YLR055C MNT2P53059 558 aa10.63□□□□□ -0.71
SPT8YLR055C YGR168CP53293 376 aa10.63□□□□□ -0.71
SPT8YLR055C MRPL50P53724 139 aa10.63□□□□□ -0.71
SPT8YLR055C NUT2Q06213 157 aa10.63□□□□□ -0.71
SPT8YLR055C BAG7Q12128 409 aa10.63□□□□□ -0.71
SPT8YLR055C BEM2P39960 2167 aaKnown RBP10.63□□□□□ -0.71
SPT8YLR055C GRX2P17695 143 aaKnown RBP10.63□□□□□ -0.71
SPT8YLR055C HSP30P25619 332 aa10.63□□□□□ -0.71
SPT8YLR055C SFP1P32432 683 aa10.63□□□□□ -0.71
SPT8YLR055C ASF2P32448 525 aaPredicted RBP10.63□□□□□ -0.71
SPT8YLR055C SLX5P32828 619 aaKnown RBP10.63□□□□□ -0.71
SPT8YLR055C LRG1P35688 1017 aa10.63□□□□□ -0.71
SPT8YLR055C TSL1P38427 1098 aaKnown RBP10.63□□□□□ -0.71
SPT8YLR055C RCK1P38622 512 aa10.63□□□□□ -0.71
SPT8YLR055C VAC7P53950 1165 aa10.63□□□□□ -0.71
SPT8YLR055C NOG1Q02892 647 aaKnown RBP10.63□□□□□ -0.71
SPT8YLR055C GSF2Q04697 403 aaKnown RBP10.63□□□□□ -0.71
SPT8YLR055C MCD1Q12158 566 aa10.63□□□□□ -0.71
SPT8YLR055C ATP4P05626 244 aa10.62□□□□□ -0.71
SPT8YLR055C SPO73P40031 143 aa10.62□□□□□ -0.71
SPT8YLR055C PCL6P40038 420 aa10.62□□□□□ -0.71
SPT8YLR055C SSY5P47002 699 aa10.62□□□□□ -0.71
SPT8YLR055C YMD8Q03697 442 aa10.62□□□□□ -0.71
SPT8YLR055C PNS1Q12412 539 aa10.62□□□□□ -0.71
SPT8YLR055C SEC2P17065 759 aa10.61□□□□□ -0.71
SPT8YLR055C PRI2P20457 528 aa10.61□□□□□ -0.71
SPT8YLR055C SAR1P20606 190 aaKnown RBP10.61□□□□□ -0.71
SPT8YLR055C THI80P35202 319 aa10.61□□□□□ -0.71
SPT8YLR055C ATG7P38862 630 aa10.61□□□□□ -0.71
SPT8YLR055C YER034WP40022 185 aaKnown RBP10.61□□□□□ -0.71
SPT8YLR055C GTS1P40956 396 aa10.61□□□□□ -0.71
SPT8YLR055C COG1P53079 417 aa10.61□□□□□ -0.71
SPT8YLR055C PFA5Q03289 374 aa10.61□□□□□ -0.71
SPT8YLR055C PEX27Q08580 376 aa10.61□□□□□ -0.71
SPT8YLR055C RPP1BP10622 106 aaKnown RBP10.61□□□□□ -0.71
SPT8YLR055C PPQ1P32945 549 aa10.61□□□□□ -0.71
SPT8YLR055C MNN9P39107 395 aaKnown RBP10.61□□□□□ -0.71
SPT8YLR055C YKE4P40544 346 aa10.61□□□□□ -0.71
SPT8YLR055C MET31Q03081 177 aa10.61□□□□□ -0.71
SPT8YLR055C YMR178WQ03219 274 aaKnown RBP10.61□□□□□ -0.71
SPT8YLR055C SSL1Q04673 461 aaPredicted RBP10.61□□□□□ -0.71
SPT8YLR055C HBT1Q07653 1046 aaKnown RBP10.61□□□□□ -0.71
SPT8YLR055C Q0010Q9ZZX9 128 aa10.61□□□□□ -0.71
SPT8YLR055C HTA1P04911 132 aaKnown RBP10.6□□□□□ -0.71
SPT8YLR055C ALG7P07286 448 aa10.6□□□□□ -0.71
SPT8YLR055C GLG1P36143 616 aa10.6□□□□□ -0.71
SPT8YLR055C YHR033WP38690 423 aa10.6□□□□□ -0.71
SPT8YLR055C FMO1P38866 432 aa10.6□□□□□ -0.71
SPT8YLR055C ISC1P40015 477 aaKnown RBP10.6□□□□□ -0.71
SPT8YLR055C YFL066CP43538 392 aa10.6□□□□□ -0.71
SPT8YLR055C CAK1P43568 368 aaPredicted RBP10.6□□□□□ -0.71
SPT8YLR055C NPY1P53164 384 aa10.6□□□□□ -0.71
SPT8YLR055C IRC15Q02733 499 aa10.6□□□□□ -0.71
SPT8YLR055C RAD34Q06665 692 aa10.6□□□□□ -0.71
SPT8YLR055C ADE5,7P07244 802 aaKnown RBP10.59□□□□□ -0.71
SPT8YLR055C UNG1P12887 359 aa10.59□□□□□ -0.71
SPT8YLR055C SEN2P16658 377 aa10.59□□□□□ -0.71
SPT8YLR055C MRPL9P31334 269 aa10.59□□□□□ -0.71
SPT8YLR055C ZRT3P34240 503 aa10.59□□□□□ -0.71
SPT8YLR055C HXT5P38695 592 aa10.59□□□□□ -0.71
SPT8YLR055C HXT16P47185 567 aa10.59□□□□□ -0.71
SPT8YLR055C MRH4P53166 561 aa10.59□□□□□ -0.71
SPT8YLR055C COG7P53195 279 aa10.59□□□□□ -0.71
SPT8YLR055C YNL181WP53878 407 aa10.59□□□□□ -0.71
SPT8YLR055C TDA7P53882 636 aaPredicted RBP10.59□□□□□ -0.71
SPT8YLR055C RNH1Q04740 348 aa10.59□□□□□ -0.71
SPT8YLR055C COS7Q07788 383 aa10.59□□□□□ -0.71
SPT8YLR055C RPN5Q12250 445 aaKnown RBP10.59□□□□□ -0.71
SPT8YLR055C YPR1Q12458 312 aa10.59□□□□□ -0.71
SPT8YLR055C YBR298C-AQ8TGK4 73 aa10.59□□□□□ -0.71
SPT8YLR055C KAR1P11927 433 aa10.58□□□□□ -0.72
SPT8YLR055C HMG1P12683 1054 aa10.58□□□□□ -0.72
SPT8YLR055C HOM2P13663 365 aaKnown RBP10.58□□□□□ -0.72
SPT8YLR055C PHO84P25297 587 aaKnown RBP10.58□□□□□ -0.72
SPT8YLR055C SEC17P32602 292 aa10.58□□□□□ -0.72
SPT8YLR055C YKL063CP35725 167 aa10.58□□□□□ -0.72
SPT8YLR055C YCR087C-AP37263 153 aa10.58□□□□□ -0.72
SPT8YLR055C BMT2P38278 337 aa10.58□□□□□ -0.72
SPT8YLR055C VMA7P39111 118 aa10.58□□□□□ -0.72
SPT8YLR055C PRE6P40303 254 aaKnown RBP10.58□□□□□ -0.72
SPT8YLR055C LAS21P40367 830 aa10.58□□□□□ -0.72
SPT8YLR055C RET2P43621 546 aa10.58□□□□□ -0.72
SPT8YLR055C SDH1Q00711 640 aa10.58□□□□□ -0.72
SPT8YLR055C TRM1P15565 570 aaKnown RBP10.58□□□□□ -0.72
SPT8YLR055C IDP1P21954 428 aaKnown RBP10.58□□□□□ -0.72
SPT8YLR055C DCW1P36091 449 aa10.58□□□□□ -0.72
SPT8YLR055C LRP1P38801 184 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms