RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	YNG2	P38806	282 aa	Known RBP	5.08	□□□□□ -1.6
SKG1	YKR100C	ROK1	P45818	564 aa	Predicted RBP	5.08	□□□□□ -1.6
SKG1	YKR100C	YGR021W	P53212	290 aa		5.08	□□□□□ -1.6
SKG1	YKR100C	AIM33	Q04516	312 aa		5.08	□□□□□ -1.6
SKG1	YKR100C	RTN1	Q04947	295 aa	Known RBP	5.08	□□□□□ -1.6
SKG1	YKR100C	YEH2	Q07950	538 aa		5.08	□□□□□ -1.6
SKG1	YKR100C	ARG81	P05085	880 aa		5.07	□□□□□ -1.6
SKG1	YKR100C	PUT2	P07275	575 aa		5.07	□□□□□ -1.6
SKG1	YKR100C	POL30	P15873	258 aa	Known RBP	5.07	□□□□□ -1.6
SKG1	YKR100C	ARF2	P19146	181 aa	Known RBP	5.07	□□□□□ -1.6
SKG1	YKR100C	TYR1	P20049	452 aa		5.07	□□□□□ -1.6
SKG1	YKR100C	RPS2	P25443	254 aa	Known RBP	5.07	□□□□□ -1.6
SKG1	YKR100C	SNC1	P31109	117 aa		5.07	□□□□□ -1.6
SKG1	YKR100C	PDB1	P32473	366 aa	Known RBP	5.07	□□□□□ -1.6
SKG1	YKR100C	COT1	P32798	439 aa		5.07	□□□□□ -1.6
SKG1	YKR100C	ROT2	P38138	954 aa		5.07	□□□□□ -1.6
SKG1	YKR100C	DBP8	P38719	431 aa		5.07	□□□□□ -1.6
SKG1	YKR100C	INP2	Q03824	705 aa		5.07	□□□□□ -1.6
SKG1	YKR100C	SSK1	Q07084	712 aa		5.07	□□□□□ -1.6
SKG1	YKR100C	PSR1	Q07800	427 aa		5.07	□□□□□ -1.6
SKG1	YKR100C	SUC2	P00724	532 aa		5.06	□□□□□ -1.6
SKG1	YKR100C	PWP1	P21304	576 aa	Known RBP	5.06	□□□□□ -1.6
SKG1	YKR100C	CPR3	P25719	182 aa		5.06	□□□□□ -1.6
SKG1	YKR100C	LOS1	P33418	1100 aa	Predicted RBP	5.06	□□□□□ -1.6
SKG1	YKR100C	YHR054C	P38780	354 aa		5.06	□□□□□ -1.6
SKG1	YKR100C	YHR218W	P38899	603 aa		5.06	□□□□□ -1.6
SKG1	YKR100C	PHB1	P40961	287 aa		5.06	□□□□□ -1.6
SKG1	YKR100C	UFE1	P41834	346 aa		5.06	□□□□□ -1.6
SKG1	YKR100C	YDR541C	Q03049	344 aa		5.06	□□□□□ -1.6
SKG1	YKR100C	ATG16	Q03818	150 aa		5.06	□□□□□ -1.6
SKG1	YKR100C	GRC3	Q07845	632 aa		5.06	□□□□□ -1.6
SKG1	YKR100C	PDR18	P53756	1333 aa		5.05	□□□□□ -1.6
SKG1	YKR100C	TCP1	P12612	559 aa	Known RBP	5.05	□□□□□ -1.6
SKG1	YKR100C	BUD14	P27637	709 aa		5.05	□□□□□ -1.6
SKG1	YKR100C	YBR139W	P38109	508 aa		5.05	□□□□□ -1.6
SKG1	YKR100C	MDM31	P38880	579 aa		5.05	□□□□□ -1.6
SKG1	YKR100C	AAD10	P47182	288 aa		5.05	□□□□□ -1.6
SKG1	YKR100C	DIA3	P52290	468 aa		5.05	□□□□□ -1.6
SKG1	YKR100C	OPI1	P21957	404 aa		5.04	□□□□□ -1.6
SKG1	YKR100C	GRR1	P24814	1151 aa		5.04	□□□□□ -1.6
SKG1	YKR100C	ATS1	P31386	333 aa		5.04	□□□□□ -1.6
SKG1	YKR100C	SIN4	P32259	974 aa		5.04	□□□□□ -1.6
SKG1	YKR100C	CBF2	P32504	956 aa		5.04	□□□□□ -1.6
SKG1	YKR100C	PXA2	P34230	853 aa		5.04	□□□□□ -1.6
SKG1	YKR100C	SDS24	P38314	527 aa		5.04	□□□□□ -1.6
SKG1	YKR100C	LAG1	P38703	411 aa		5.04	□□□□□ -1.6
SKG1	YKR100C	ERG26	P53199	349 aa	Known RBP	5.04	□□□□□ -1.6
SKG1	YKR100C	RSM23	Q01163	450 aa		5.04	□□□□□ -1.6
SKG1	YKR100C	RPM2	Q02773	1202 aa		5.04	□□□□□ -1.6
SKG1	YKR100C	TSR1	Q07381	788 aa	Known RBP	5.04	□□□□□ -1.6
SKG1	YKR100C	LEU9	Q12166	604 aa	Known RBP	5.04	□□□□□ -1.6
SKG1	YKR100C	RPL15A	P05748	204 aa	Known RBP	5.03	□□□□□ -1.6
SKG1	YKR100C	CMK1	P27466	446 aa	Known RBP	5.03	□□□□□ -1.6
SKG1	YKR100C	KAP123	P40069	1113 aa	Known RBP	5.03	□□□□□ -1.6
SKG1	YKR100C	SAM50	P53969	484 aa		5.03	□□□□□ -1.6
SKG1	YKR100C	YMR087W	Q04299	284 aa		5.03	□□□□□ -1.6
SKG1	YKR100C	TEN1	Q07921	160 aa		5.03	□□□□□ -1.6
SKG1	YKR100C	THI20	Q08224	551 aa		5.03	□□□□□ -1.6
SKG1	YKR100C	YDL211C	Q12121	372 aa		5.03	□□□□□ -1.6
SKG1	YKR100C	NBP2	Q12163	236 aa		5.03	□□□□□ -1.6
SKG1	YKR100C	BLM10	P43583	2143 aa		5.02	□□□□□ -1.61
SKG1	YKR100C	REC107	P21651	314 aa		5.02	□□□□□ -1.61
SKG1	YKR100C	YMR160W	Q03823	816 aa		5.02	□□□□□ -1.61
SKG1	YKR100C	RPC11	Q04307	110 aa	Predicted RBP	5.02	□□□□□ -1.61
SKG1	YKR100C	GDH1	P07262	454 aa	Known RBP	5.01	□□□□□ -1.61
SKG1	YKR100C	RED1	P14291	827 aa		5.01	□□□□□ -1.61
SKG1	YKR100C	NOP1	P15646	327 aa	Known RBP	5.01	□□□□□ -1.61
SKG1	YKR100C	VMA16	P23968	213 aa		5.01	□□□□□ -1.61
SKG1	YKR100C	VPS17	P32913	551 aa		5.01	□□□□□ -1.61
SKG1	YKR100C	ECM15	P35195	104 aa		5.01	□□□□□ -1.61
SKG1	YKR100C	TAE1	P38340	232 aa		5.01	□□□□□ -1.61
SKG1	YKR100C	GAA1	P39012	614 aa		5.01	□□□□□ -1.61
SKG1	YKR100C	FHL1	P39521	936 aa		5.01	□□□□□ -1.61
SKG1	YKR100C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
SKG1	YKR100C	SMM1	P53720	384 aa	Known RBP	5.01	□□□□□ -1.61
SKG1	YKR100C	BNI5	P53890	448 aa	Known RBP	5.01	□□□□□ -1.61
SKG1	YKR100C	NCS2	P53923	493 aa	Predicted RBP	5.01	□□□□□ -1.61
SKG1	YKR100C	ARK1	P53974	638 aa		5.01	□□□□□ -1.61
SKG1	YKR100C	ENT4	Q07872	247 aa		5.01	□□□□□ -1.61
SKG1	YKR100C	RSA1	Q08932	381 aa		5.01	□□□□□ -1.61
SKG1	YKR100C	SMF1	P38925	575 aa		5	□□□□□ -1.61
SKG1	YKR100C	SIP4	P46954	829 aa		5	□□□□□ -1.61
SKG1	YKR100C	RTT101	P47050	842 aa		5	□□□□□ -1.61
SKG1	YKR100C	YDL186W	P48568	277 aa		5	□□□□□ -1.61
SKG1	YKR100C	SHE10	P53075	577 aa		5	□□□□□ -1.61
SKG1	YKR100C	FAR10	Q06001	478 aa		5	□□□□□ -1.61
SKG1	YKR100C	CDC45	Q08032	650 aa		5	□□□□□ -1.61
SKG1	YKR100C	PER33	Q12144	273 aa		5	□□□□□ -1.61
SKG1	YKR100C	PPH21	P23594	369 aa		4.99	□□□□□ -1.61
SKG1	YKR100C	AGA1	P32323	725 aa		4.99	□□□□□ -1.61
SKG1	YKR100C	NDC1	P32500	655 aa		4.99	□□□□□ -1.61
SKG1	YKR100C	NFU1	P32860	256 aa		4.99	□□□□□ -1.61
SKG1	YKR100C	SIP2	P34164	415 aa	Known RBP	4.99	□□□□□ -1.61
SKG1	YKR100C	MTR2	P34232	184 aa	Known RBP	4.99	□□□□□ -1.61
SKG1	YKR100C	RRN3	P36070	627 aa		4.99	□□□□□ -1.61
SKG1	YKR100C	AGP2	P38090	596 aa		4.99	□□□□□ -1.61
SKG1	YKR100C	ECM13	P38195	257 aa		4.99	□□□□□ -1.61
SKG1	YKR100C	RPH1	P39956	796 aa		4.99	□□□□□ -1.61
SKG1	YKR100C	TRF5	P48561	642 aa	Known RBP	4.99	□□□□□ -1.61
SKG1	YKR100C	CBK1	P53894	756 aa		4.99	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms