RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C YAL037WP39728 267 aa2.15□□□□□ -2.07
UBP11YKR098C GCD10P41814 478 aa2.15□□□□□ -2.07
UBP11YKR098C GWT1P47026 490 aa2.15□□□□□ -2.07
UBP11YKR098C EFM3P47163 339 aa2.15□□□□□ -2.07
UBP11YKR098C YIP5P53108 310 aa2.15□□□□□ -2.07
UBP11YKR098C ARK1P53974 638 aa2.15□□□□□ -2.07
UBP11YKR098C DIG1Q03063 452 aaKnown RBP2.15□□□□□ -2.07
UBP11YKR098C YMR034CQ05131 434 aaPredicted RBP2.15□□□□□ -2.07
UBP11YKR098C VPS74Q06385 345 aa2.15□□□□□ -2.07
UBP11YKR098C RUP1Q12242 671 aa2.15□□□□□ -2.07
UBP11YKR098C SFG1Q12507 346 aa2.15□□□□□ -2.07
UBP11YKR098C CSR2Q12734 1121 aa2.15□□□□□ -2.07
UBP11YKR098C TAD3Q9URQ3 322 aa2.15□□□□□ -2.07
UBP11YKR098C CHS1P08004 1131 aa2.15□□□□□ -2.07
UBP11YKR098C RAD57P25301 460 aa2.15□□□□□ -2.07
UBP11YKR098C YCR100CP25606 316 aa2.15□□□□□ -2.07
UBP11YKR098C YCR022CP25620 114 aa2.15□□□□□ -2.07
UBP11YKR098C CRM1P30822 1084 aaKnown RBP2.15□□□□□ -2.07
UBP11YKR098C CYS4P32582 507 aaKnown RBP2.15□□□□□ -2.07
UBP11YKR098C YSC83P32792 385 aa2.15□□□□□ -2.07
UBP11YKR098C YCR041WP37265 110 aa2.15□□□□□ -2.07
UBP11YKR098C QDR3P38227 689 aa2.15□□□□□ -2.07
UBP11YKR098C RRF1P38771 230 aa2.15□□□□□ -2.07
UBP11YKR098C RTT107P38850 1070 aa2.15□□□□□ -2.07
UBP11YKR098C PCF11P39081 626 aaPredicted RBP2.15□□□□□ -2.07
UBP11YKR098C HMS2P47175 358 aa2.15□□□□□ -2.07
UBP11YKR098C ASN2P49090 572 aaKnown RBP2.15□□□□□ -2.07
UBP11YKR098C SHE4P51534 789 aa2.15□□□□□ -2.07
UBP11YKR098C CUE3P53137 624 aaKnown RBP2.15□□□□□ -2.07
UBP11YKR098C SCW4P53334 386 aaKnown RBP2.15□□□□□ -2.07
UBP11YKR098C YNR068CP53754 272 aa2.15□□□□□ -2.07
UBP11YKR098C YNL143CP53908 130 aa2.15□□□□□ -2.07
UBP11YKR098C RPM2Q02773 1202 aa2.15□□□□□ -2.07
UBP11YKR098C URH1Q04179 340 aa2.15□□□□□ -2.07
UBP11YKR098C IPK1Q06667 281 aa2.15□□□□□ -2.07
UBP11YKR098C NSE1Q07913 336 aa2.15□□□□□ -2.07
UBP11YKR098C YLL056CQ12177 298 aa2.15□□□□□ -2.07
UBP11YKR098C ORT1Q12375 292 aa2.15□□□□□ -2.07
UBP11YKR098C RMD5Q12508 421 aa2.15□□□□□ -2.07
UBP11YKR098C IMA3P0CW40 589 aa2.14□□□□□ -2.07
UBP11YKR098C IMA4P0CW41 589 aa2.14□□□□□ -2.07
UBP11YKR098C SCH9P11792 824 aaKnown RBP2.14□□□□□ -2.07
UBP11YKR098C NRP1P32770 719 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
UBP11YKR098C ATO2P32907 282 aa2.14□□□□□ -2.07
UBP11YKR098C RRP1P35178 278 aaPredicted RBP2.14□□□□□ -2.07
UBP11YKR098C RSM22P36056 628 aa2.14□□□□□ -2.07
UBP11YKR098C ARC40P38328 384 aaKnown RBP2.14□□□□□ -2.07
UBP11YKR098C INM1P38710 295 aa2.14□□□□□ -2.07
UBP11YKR098C MNL1P38888 796 aa2.14□□□□□ -2.07
UBP11YKR098C HAT2P39984 401 aa2.14□□□□□ -2.07
UBP11YKR098C ELP2P42935 788 aa2.14□□□□□ -2.07
UBP11YKR098C FRE4P53746 719 aa2.14□□□□□ -2.07
UBP11YKR098C UTP6Q02354 440 aaKnown RBP2.14□□□□□ -2.07
UBP11YKR098C ODC1Q03028 310 aa2.14□□□□□ -2.07
UBP11YKR098C IMA2Q08295 589 aa2.14□□□□□ -2.07
UBP11YKR098C SKI7Q08491 747 aaPredicted RBP2.14□□□□□ -2.07
UBP11YKR098C YPR022CQ12139 1133 aa2.14□□□□□ -2.07
UBP11YKR098C ATG34Q12292 412 aa2.14□□□□□ -2.07
UBP11YKR098C SRN2Q99176 213 aa2.14□□□□□ -2.07
UBP11YKR098C CDC21P06785 304 aa2.13□□□□□ -2.07
UBP11YKR098C YAR066WP0CX18 203 aa2.13□□□□□ -2.07
UBP11YKR098C YHR214WP0CX19 203 aa2.13□□□□□ -2.07
UBP11YKR098C MRS3P10566 314 aa2.13□□□□□ -2.07
UBP11YKR098C TAL1P15019 335 aaKnown RBP2.13□□□□□ -2.07
UBP11YKR098C DAL5P15365 543 aa2.13□□□□□ -2.07
UBP11YKR098C RIM2P38127 377 aa2.13□□□□□ -2.07
UBP11YKR098C LYS1P38998 373 aaRIP-Chip data2.13□□□□□ -2.07not detected
UBP11YKR098C YIL089WP40500 205 aa2.13□□□□□ -2.07
UBP11YKR098C DIM1P41819 318 aaKnown RBP2.13□□□□□ -2.07
UBP11YKR098C RRT5P43607 289 aa2.13□□□□□ -2.07
UBP11YKR098C IKS1P47042 667 aa2.13□□□□□ -2.07
UBP11YKR098C BRO1P48582 844 aa2.13□□□□□ -2.07
UBP11YKR098C AQR1P53943 586 aa2.13□□□□□ -2.07
UBP11YKR098C PRO2P54885 456 aaKnown RBP2.13□□□□□ -2.07
UBP11YKR098C REX4Q08237 289 aa2.13□□□□□ -2.07
UBP11YKR098C GEP3Q08622 556 aa2.13□□□□□ -2.07
UBP11YKR098C NBL1Q3E7Y6 73 aa2.13□□□□□ -2.07
UBP11YKR098C STE3P06783 470 aa2.13□□□□□ -2.07
UBP11YKR098C YCR043CP25361 127 aa2.13□□□□□ -2.07
UBP11YKR098C LSB5P25369 354 aa2.13□□□□□ -2.07
UBP11YKR098C RDS1P25611 832 aa2.13□□□□□ -2.07
UBP11YKR098C ITR1P30605 584 aa2.13□□□□□ -2.07
UBP11YKR098C NDI1P32340 513 aa2.13□□□□□ -2.07
UBP11YKR098C TRS65P32893 560 aa2.13□□□□□ -2.07
UBP11YKR098C SPP381P38282 291 aaPredicted RBP2.13□□□□□ -2.07
UBP11YKR098C MSG5P38590 489 aa2.13□□□□□ -2.07
UBP11YKR098C YND1P40009 630 aa2.13□□□□□ -2.07
UBP11YKR098C YER079WP40052 210 aaKnown RBP2.13□□□□□ -2.07
UBP11YKR098C PAC11P40960 533 aa2.13□□□□□ -2.07
UBP11YKR098C TES1P41903 349 aaKnown RBP2.13□□□□□ -2.07
UBP11YKR098C RPA34P47006 233 aaPredicted RBP2.13□□□□□ -2.07
UBP11YKR098C YNR048WP53740 393 aa2.13□□□□□ -2.07
UBP11YKR098C RSN1Q03516 953 aa2.13□□□□□ -2.07
UBP11YKR098C FMP42Q04991 504 aa2.13□□□□□ -2.07
UBP11YKR098C HCR1Q05775 265 aaKnown RBP2.13□□□□□ -2.07
UBP11YKR098C YLR281CQ05863 155 aa2.13□□□□□ -2.07
UBP11YKR098C SPH1Q06160 661 aa2.13□□□□□ -2.07
UBP11YKR098C SNA4Q07549 140 aa2.13□□□□□ -2.07
UBP11YKR098C SGT1Q08446 395 aa2.13□□□□□ -2.07
UBP11YKR098C RNH203Q12338 110 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 64.4 ms