RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W MDV1P47025 714 aa3.8□□□□□ -1.8
CTK1YKL139W HMS2P47175 358 aa3.8□□□□□ -1.8
CTK1YKL139W PRO2P54885 456 aaKnown RBP3.8□□□□□ -1.8
CTK1YKL139W UTP6Q02354 440 aaKnown RBP3.8□□□□□ -1.8
CTK1YKL139W YMR254CQ04838 102 aa3.8□□□□□ -1.8
CTK1YKL139W SNT309Q06091 175 aaPredicted RBP3.8□□□□□ -1.8
CTK1YKL139W IPK1Q06667 281 aa3.8□□□□□ -1.8
CTK1YKL139W NOP6Q07623 225 aaKnown RBP3.8□□□□□ -1.8
CTK1YKL139W YDL009CQ12210 107 aa3.8□□□□□ -1.8
CTK1YKL139W RUP1Q12242 671 aa3.8□□□□□ -1.8
CTK1YKL139W NBL1Q3E7Y6 73 aa3.8□□□□□ -1.8
CTK1YKL139W ILV5P06168 395 aaKnown RBP3.8□□□□□ -1.8
CTK1YKL139W STE3P06783 470 aa3.8□□□□□ -1.8
CTK1YKL139W CHS1P08004 1131 aa3.8□□□□□ -1.8
CTK1YKL139W IMA3P0CW40 589 aa3.8□□□□□ -1.8
CTK1YKL139W IMA4P0CW41 589 aa3.8□□□□□ -1.8
CTK1YKL139W RAD57P25301 460 aa3.8□□□□□ -1.8
CTK1YKL139W NDI1P32340 513 aa3.8□□□□□ -1.8
CTK1YKL139W CYS4P32582 507 aaKnown RBP3.8□□□□□ -1.8
CTK1YKL139W SUR1P33300 382 aa3.8□□□□□ -1.8
CTK1YKL139W KAP104P38217 918 aaKnown RBP3.8□□□□□ -1.8
CTK1YKL139W STP2P38704 541 aa3.8□□□□□ -1.8
CTK1YKL139W INM1P38710 295 aa3.8□□□□□ -1.8
CTK1YKL139W RRP3P38712 501 aaKnown RBP3.8□□□□□ -1.8
CTK1YKL139W YAL037WP39728 267 aa3.8□□□□□ -1.8
CTK1YKL139W OSW5P40219 148 aa3.8□□□□□ -1.8
CTK1YKL139W RPA34P47006 233 aaPredicted RBP3.8□□□□□ -1.8
CTK1YKL139W EFM3P47163 339 aa3.8□□□□□ -1.8
CTK1YKL139W YIP1P53039 248 aa3.8□□□□□ -1.8
CTK1YKL139W STP1Q00947 519 aa3.8□□□□□ -1.8
CTK1YKL139W PNG1Q02890 363 aa3.8□□□□□ -1.8
CTK1YKL139W NSE1Q07913 336 aa3.8□□□□□ -1.8
CTK1YKL139W REX4Q08237 289 aa3.8□□□□□ -1.8
CTK1YKL139W IMA2Q08295 589 aa3.8□□□□□ -1.8
CTK1YKL139W SFG1Q12507 346 aa3.8□□□□□ -1.8
CTK1YKL139W SRN2Q99176 213 aa3.8□□□□□ -1.8
CTK1YKL139W CTR86P25355 563 aa3.79□□□□□ -1.8
CTK1YKL139W RSM22P36056 628 aa3.79□□□□□ -1.8
CTK1YKL139W SPP381P38282 291 aaPredicted RBP3.79□□□□□ -1.8
CTK1YKL139W RTT107P38850 1070 aa3.79□□□□□ -1.8
CTK1YKL139W YER079WP40052 210 aaKnown RBP3.79□□□□□ -1.8
CTK1YKL139W PHB2P50085 310 aa3.79□□□□□ -1.8
CTK1YKL139W GPI15P53961 229 aa3.79□□□□□ -1.8
CTK1YKL139W MGR3Q04472 501 aa3.79□□□□□ -1.8
CTK1YKL139W MRPL1Q04599 285 aa3.79□□□□□ -1.8
CTK1YKL139W YEH2Q07950 538 aa3.79□□□□□ -1.8
CTK1YKL139W MLH2Q07980 695 aa3.79□□□□□ -1.8
CTK1YKL139W CSR2Q12734 1121 aa3.79□□□□□ -1.8
CTK1YKL139W YAR066WP0CX18 203 aa3.78□□□□□ -1.8
CTK1YKL139W YHR214WP0CX19 203 aa3.78□□□□□ -1.8
CTK1YKL139W YFL068WP0CX99 160 aa3.78□□□□□ -1.8
CTK1YKL139W YLL066W-AP0CY00 160 aa3.78□□□□□ -1.8
CTK1YKL139W YLL067W-AP0CY01 160 aa3.78□□□□□ -1.8
CTK1YKL139W GLN3P18494 730 aa3.78□□□□□ -1.8
CTK1YKL139W YCR100CP25606 316 aa3.78□□□□□ -1.8
CTK1YKL139W RDS1P25611 832 aa3.78□□□□□ -1.8
CTK1YKL139W SRB2P34162 210 aa3.78□□□□□ -1.8
CTK1YKL139W SIP2P34164 415 aaKnown RBP3.78□□□□□ -1.8
CTK1YKL139W MSG5P38590 489 aa3.78□□□□□ -1.8
CTK1YKL139W LYS1P38998 373 aaRIP-Chip data3.78□□□□□ -1.8not detected
CTK1YKL139W GWT1P47026 490 aa3.78□□□□□ -1.8
CTK1YKL139W BNA3P47039 444 aaKnown RBP3.78□□□□□ -1.8
CTK1YKL139W BRO1P48582 844 aa3.78□□□□□ -1.8
CTK1YKL139W URH1Q04179 340 aa3.78□□□□□ -1.8
CTK1YKL139W VPS74Q06385 345 aa3.78□□□□□ -1.8
CTK1YKL139W RTC5Q12108 567 aaKnown RBP3.78□□□□□ -1.8
CTK1YKL139W MDY2Q12285 212 aa3.78□□□□□ -1.8
CTK1YKL139W ORT1Q12375 292 aa3.78□□□□□ -1.8
CTK1YKL139W DST1P07273 309 aa3.77□□□□□ -1.81
CTK1YKL139W PCL7P40186 285 aa3.77□□□□□ -1.81
CTK1YKL139W YIR014WP40570 242 aa3.77□□□□□ -1.81
CTK1YKL139W PAC11P40960 533 aa3.77□□□□□ -1.81
CTK1YKL139W MPP10P47083 593 aaKnown RBP3.77□□□□□ -1.81
CTK1YKL139W MPS2P53159 387 aa3.77□□□□□ -1.81
CTK1YKL139W FRE4P53746 719 aa3.77□□□□□ -1.81
CTK1YKL139W PRM1P53835 661 aa3.77□□□□□ -1.81
CTK1YKL139W DIG1Q03063 452 aaKnown RBP3.77□□□□□ -1.81
CTK1YKL139W VTI1Q04338 217 aa3.77□□□□□ -1.81
CTK1YKL139W YMR034CQ05131 434 aaPredicted RBP3.77□□□□□ -1.81
CTK1YKL139W DSE3Q08729 430 aa3.77□□□□□ -1.81
CTK1YKL139W ATG34Q12292 412 aa3.77□□□□□ -1.81
CTK1YKL139W PTP1P25044 335 aa3.76□□□□□ -1.81
CTK1YKL139W PCH2P38126 564 aa3.76□□□□□ -1.81
CTK1YKL139W RIM2P38127 377 aa3.76□□□□□ -1.81
CTK1YKL139W PCI8P40512 444 aa3.76□□□□□ -1.81
CTK1YKL139W ARK1P53974 638 aa3.76□□□□□ -1.81
CTK1YKL139W ECM7Q06200 448 aa3.76□□□□□ -1.81
CTK1YKL139W YPR022CQ12139 1133 aa3.76□□□□□ -1.81
CTK1YKL139W RNH203Q12338 110 aa3.76□□□□□ -1.81
CTK1YKL139W OPI3P05375 206 aa3.76□□□□□ -1.81
CTK1YKL139W SAG1P20840 650 aa3.76□□□□□ -1.81
CTK1YKL139W YCR022CP25620 114 aa3.76□□□□□ -1.81
CTK1YKL139W RGT1P32862 1170 aa3.76□□□□□ -1.81
CTK1YKL139W PTK1P36002 662 aaPredicted RBP3.76□□□□□ -1.81
CTK1YKL139W YHR177WP38867 453 aa3.76□□□□□ -1.81
CTK1YKL139W YIL152WP40455 235 aa3.76□□□□□ -1.81
CTK1YKL139W GCD10P41814 478 aa3.76□□□□□ -1.81
CTK1YKL139W HST1P53685 503 aa3.76□□□□□ -1.81
CTK1YKL139W ODC1Q03028 310 aa3.76□□□□□ -1.81
CTK1YKL139W SKI7Q08491 747 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms