RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C IRC10Q08118 586 aa8.37□□□□□ -1.07
SSL2YIL143C RPC40P07703 335 aaKnown RBP8.37□□□□□ -1.07
SSL2YIL143C HMG1P12683 1054 aa8.37□□□□□ -1.07
SSL2YIL143C ALY1P36117 915 aa8.37□□□□□ -1.07
SSL2YIL143C YBR284WP38150 797 aa8.37□□□□□ -1.07
SSL2YIL143C EXO1P39875 702 aa8.37□□□□□ -1.07
SSL2YIL143C GAT1P43574 510 aa8.37□□□□□ -1.07
SSL2YIL143C MPS1P54199 764 aa8.37□□□□□ -1.07
SSL2YIL143C YLR352WQ06479 807 aa8.37□□□□□ -1.07
SSL2YIL143C LEA1Q08963 238 aaPredicted RBP8.37□□□□□ -1.07
SSL2YIL143C PHO5P00635 467 aa8.36□□□□□ -1.07
SSL2YIL143C HVG1P0CE11 249 aa8.36□□□□□ -1.07
SSL2YIL143C SGV1P23293 657 aaKnown RBP8.36□□□□□ -1.07
SSL2YIL143C YKL063CP35725 167 aa8.36□□□□□ -1.07
SSL2YIL143C YCR087C-AP37263 153 aa8.36□□□□□ -1.07
SSL2YIL143C EMP65P40085 556 aa8.36□□□□□ -1.07
SSL2YIL143C SSU1P41930 458 aa8.36□□□□□ -1.07
SSL2YIL143C YGR210CP42942 411 aa8.36□□□□□ -1.07
SSL2YIL143C COQ6P53318 479 aa8.36□□□□□ -1.07
SSL2YIL143C COS7Q07788 383 aa8.36□□□□□ -1.07
SSL2YIL143C YPL245WQ12179 454 aaKnown RBP8.36□□□□□ -1.07
SSL2YIL143C MHT1Q12525 324 aa8.36□□□□□ -1.07
SSL2YIL143C HNM1P19807 563 aa8.36□□□□□ -1.07
SSL2YIL143C ATG22P25568 528 aa8.36□□□□□ -1.07
SSL2YIL143C ISC1P40015 477 aaKnown RBP8.36□□□□□ -1.07
SSL2YIL143C FMP10P40098 244 aa8.36□□□□□ -1.07
SSL2YIL143C JHD2P47156 728 aaPredicted RBP8.36□□□□□ -1.07
SSL2YIL143C BPL1P48445 690 aaPredicted RBP8.36□□□□□ -1.07
SSL2YIL143C DBP6P53734 629 aaKnown RBP8.36□□□□□ -1.07
SSL2YIL143C MDM32Q12171 622 aa8.36□□□□□ -1.07
SSL2YIL143C LPX1Q12405 387 aaKnown RBP8.36□□□□□ -1.07
SSL2YIL143C YCL012CQ8J0M4 134 aa8.36□□□□□ -1.07
SSL2YIL143C PDE2P06776 526 aa8.35□□□□□ -1.07
SSL2YIL143C KIN2P13186 1147 aaKnown RBP8.35□□□□□ -1.07
SSL2YIL143C SIR1P21691 654 aa8.35□□□□□ -1.07
SSL2YIL143C MRPL8P22353 238 aa8.35□□□□□ -1.07
SSL2YIL143C RPC34P32910 317 aa8.35□□□□□ -1.07
SSL2YIL143C RMA1P36001 430 aaKnown RBP8.35□□□□□ -1.07
SSL2YIL143C APM3P38153 483 aa8.35□□□□□ -1.07
SSL2YIL143C DUN1P39009 513 aa8.35□□□□□ -1.07
SSL2YIL143C PMT4P46971 762 aa8.35□□□□□ -1.07
SSL2YIL143C GNP1P48813 663 aa8.35□□□□□ -1.07
SSL2YIL143C VAC7P53950 1165 aa8.35□□□□□ -1.07
SSL2YIL143C IRC15Q02733 499 aa8.35□□□□□ -1.07
SSL2YIL143C PST1Q12355 444 aa8.35□□□□□ -1.07
SSL2YIL143C MET2P08465 486 aa8.35□□□□□ -1.07
SSL2YIL143C TRM1P15565 570 aaKnown RBP8.35□□□□□ -1.07
SSL2YIL143C MDH1P17505 334 aaKnown RBP RIP-Chip data8.35□□□□□ -1.07not detected
SSL2YIL143C MIH1P23748 554 aa8.35□□□□□ -1.07
SSL2YIL143C LYP1P32487 611 aa8.35□□□□□ -1.07
SSL2YIL143C RPH1P39956 796 aa8.35□□□□□ -1.07
SSL2YIL143C RRG9P40156 214 aa8.35□□□□□ -1.07
SSL2YIL143C GPP1P41277 250 aaKnown RBP8.35□□□□□ -1.07
SSL2YIL143C IME4P41833 600 aa8.35□□□□□ -1.07
SSL2YIL143C AIM22P47051 409 aa8.35□□□□□ -1.07
SSL2YIL143C IGO1P53897 168 aa8.35□□□□□ -1.07
SSL2YIL143C YPL071CQ02864 156 aa8.35□□□□□ -1.07
SSL2YIL143C HER2Q03557 464 aa8.35□□□□□ -1.07
SSL2YIL143C RGC1Q06108 1083 aaKnown RBP8.35□□□□□ -1.07
SSL2YIL143C SIA1Q12212 622 aa8.35□□□□□ -1.07
SSL2YIL143C RTR2Q12378 196 aa8.35□□□□□ -1.07
SSL2YIL143C LEU1P07264 779 aaKnown RBP8.34□□□□□ -1.07
SSL2YIL143C DIT1P21623 536 aa8.34□□□□□ -1.07
SSL2YIL143C PHO11P35842 467 aa8.34□□□□□ -1.07
SSL2YIL143C YBR242WP38331 238 aa8.34□□□□□ -1.07
SSL2YIL143C PHO12P38693 467 aa8.34□□□□□ -1.07
SSL2YIL143C UFE1P41834 346 aa8.34□□□□□ -1.07
SSL2YIL143C MNN5P46982 586 aa8.34□□□□□ -1.07
SSL2YIL143C IRC18P47056 224 aa8.34□□□□□ -1.07
SSL2YIL143C HAM1P47119 197 aaKnown RBP8.34□□□□□ -1.07
SSL2YIL143C SNZ1Q03148 297 aa8.34□□□□□ -1.07
SSL2YIL143C RSC3Q06639 885 aa8.34□□□□□ -1.07
SSL2YIL143C TFB4Q12004 338 aa8.34□□□□□ -1.07
SSL2YIL143C ATG31Q12421 196 aa8.34□□□□□ -1.07
SSL2YIL143C LSO1Q3E827 93 aa8.34□□□□□ -1.07
SSL2YIL143C INH1P01097 85 aa8.34□□□□□ -1.07
SSL2YIL143C SST2P11972 698 aaKnown RBP8.34□□□□□ -1.07
SSL2YIL143C RED1P14291 827 aa8.34□□□□□ -1.07
SSL2YIL143C MLH1P38920 769 aa8.34□□□□□ -1.07
SSL2YIL143C FRE4P53746 719 aa8.34□□□□□ -1.07
SSL2YIL143C ISU1Q03020 165 aa8.34□□□□□ -1.07
SSL2YIL143C DLT1Q04216 342 aa8.34□□□□□ -1.07
SSL2YIL143C YLR012CQ07927 99 aa8.34□□□□□ -1.07
SSL2YIL143C YDR056CQ12025 205 aa8.34□□□□□ -1.07
SSL2YIL143C LDB19Q12502 818 aa8.34□□□□□ -1.07
SSL2YIL143C HIS3P06633 220 aa8.33□□□□□ -1.08
SSL2YIL143C LIP5P32875 414 aa8.33□□□□□ -1.08
SSL2YIL143C PRP18P33411 251 aaPredicted RBP8.33□□□□□ -1.08
SSL2YIL143C TIP20P33891 701 aa8.33□□□□□ -1.08
SSL2YIL143C NIC96P34077 839 aa8.33□□□□□ -1.08
SSL2YIL143C YIR016WP40572 265 aa8.33□□□□□ -1.08
SSL2YIL143C DID2P69771 204 aa8.33□□□□□ -1.08
SSL2YIL143C PEX11Q12462 236 aa8.33□□□□□ -1.08
SSL2YIL143C SUS1Q6WNK7 96 aa8.33□□□□□ -1.08
SSL2YIL143C SRN2Q99176 213 aa8.33□□□□□ -1.08
SSL2YIL143C LEU4P06208 619 aaKnown RBP8.33□□□□□ -1.08
SSL2YIL143C NDC1P32500 655 aa8.33□□□□□ -1.08
SSL2YIL143C JEN1P36035 616 aa8.33□□□□□ -1.08
SSL2YIL143C BAP2P38084 609 aa8.33□□□□□ -1.08
SSL2YIL143C YJL218WP40892 196 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms