RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W SPR6Q01684 191 aa4.84□□□□□ -1.63
MSH1YHR120W MTQ2Q03920 221 aaPredicted RBP4.84□□□□□ -1.63
MSH1YHR120W RAD33Q04231 177 aa4.84□□□□□ -1.63
MSH1YHR120W YOL159CQ08300 171 aa4.84□□□□□ -1.63
MSH1YHR120W SGT1Q08446 395 aa4.84□□□□□ -1.63
MSH1YHR120W RRP42Q12277 265 aaPredicted RBP4.84□□□□□ -1.63
MSH1YHR120W DBP10Q12389 995 aaKnown RBP4.84□□□□□ -1.63
MSH1YHR120W YKL018C-AQ3E7A7 99 aa4.84□□□□□ -1.63
MSH1YHR120W HTA2P04912 132 aa4.83□□□□□ -1.64
MSH1YHR120W MRP13P12686 339 aa4.83□□□□□ -1.64
MSH1YHR120W CMP2P14747 604 aa4.83□□□□□ -1.64
MSH1YHR120W URE2P23202 354 aaKnown RBP4.83□□□□□ -1.64
MSH1YHR120W YCR006CP25350 157 aa4.83□□□□□ -1.64
MSH1YHR120W FUN30P31380 1131 aa4.83□□□□□ -1.64
MSH1YHR120W NTH1P32356 751 aa4.83□□□□□ -1.64
MSH1YHR120W MAE1P36013 669 aaKnown RBP4.83□□□□□ -1.64
MSH1YHR120W RIB1P38066 345 aa4.83□□□□□ -1.64
MSH1YHR120W MTG2P38860 518 aa4.83□□□□□ -1.64
MSH1YHR120W NDE1P40215 560 aa4.83□□□□□ -1.64
MSH1YHR120W SWP82P43554 623 aa4.83□□□□□ -1.64
MSH1YHR120W TLG1Q03322 224 aa4.83□□□□□ -1.64
MSH1YHR120W KRE28Q04431 385 aa4.83□□□□□ -1.64
MSH1YHR120W RIF2Q06208 395 aa4.83□□□□□ -1.64
MSH1YHR120W YOR114WQ12219 294 aa4.83□□□□□ -1.64
MSH1YHR120W YOL107WQ12239 342 aa4.83□□□□□ -1.64
MSH1YHR120W JLP1Q12358 412 aa4.83□□□□□ -1.64
MSH1YHR120W NUM1Q00402 2748 aa4.83□□□□□ -1.64
MSH1YHR120W MSS116P15424 664 aaKnown RBP4.83□□□□□ -1.64
MSH1YHR120W GUK1P15454 187 aaKnown RBP4.83□□□□□ -1.64
MSH1YHR120W HOP1P20050 605 aa4.83□□□□□ -1.64
MSH1YHR120W GBP2P25555 427 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
MSH1YHR120W CRM1P30822 1084 aaKnown RBP4.83□□□□□ -1.64
MSH1YHR120W RCN1P36054 211 aa4.83□□□□□ -1.64
MSH1YHR120W ECM8P38246 354 aa4.83□□□□□ -1.64
MSH1YHR120W RGA1P39083 1007 aa4.83□□□□□ -1.64
MSH1YHR120W RBG1P39729 369 aa4.83□□□□□ -1.64
MSH1YHR120W YER034WP40022 185 aaKnown RBP4.83□□□□□ -1.64
MSH1YHR120W FKH2P41813 862 aa4.83□□□□□ -1.64
MSH1YHR120W EFM5P53200 248 aaKnown RBP4.83□□□□□ -1.64
MSH1YHR120W FHN1P53279 174 aa4.83□□□□□ -1.64
MSH1YHR120W YMR099CQ03161 297 aaKnown RBP4.83□□□□□ -1.64
MSH1YHR120W RSN1Q03516 953 aa4.83□□□□□ -1.64
MSH1YHR120W ECM11Q04110 302 aa4.83□□□□□ -1.64
MSH1YHR120W YMR111CQ04461 462 aaPredicted RBP4.83□□□□□ -1.64
MSH1YHR120W RRN11Q04712 507 aa4.83□□□□□ -1.64
MSH1YHR120W FMP45Q07651 309 aa4.83□□□□□ -1.64
MSH1YHR120W YLR030WQ07967 263 aa4.83□□□□□ -1.64
MSH1YHR120W YOL073CQ08232 322 aa4.83□□□□□ -1.64
MSH1YHR120W THP2O13539 261 aaKnown RBP4.83□□□□□ -1.64
MSH1YHR120W SPT3P06844 337 aa4.83□□□□□ -1.64
MSH1YHR120W GAL7P08431 366 aa4.83□□□□□ -1.64
MSH1YHR120W LAT1P12695 482 aaKnown RBP4.83□□□□□ -1.64
MSH1YHR120W KIN2P13186 1147 aaKnown RBP4.83□□□□□ -1.64
MSH1YHR120W BUB3P26449 341 aa4.83□□□□□ -1.64
MSH1YHR120W CDC3P32457 520 aaKnown RBP4.83□□□□□ -1.64
MSH1YHR120W COX13P32799 129 aa4.83□□□□□ -1.64
MSH1YHR120W MRPL6P32904 214 aa4.83□□□□□ -1.64
MSH1YHR120W YLF2P38746 405 aa4.83□□□□□ -1.64
MSH1YHR120W GGC1P38988 300 aa4.83□□□□□ -1.64
MSH1YHR120W AYR1P40471 297 aa4.83□□□□□ -1.64
MSH1YHR120W YRB2P40517 327 aa4.83□□□□□ -1.64
MSH1YHR120W SPG5P42933 373 aa4.83□□□□□ -1.64
MSH1YHR120W ESF2P53743 316 aaKnown RBP4.83□□□□□ -1.64
MSH1YHR120W YDR124WQ04608 324 aa4.83□□□□□ -1.64
MSH1YHR120W RRP45Q05636 305 aaKnown RBP4.83□□□□□ -1.64
MSH1YHR120W RAD34Q06665 692 aa4.83□□□□□ -1.64
MSH1YHR120W YOR389WQ08912 624 aa4.83□□□□□ -1.64
MSH1YHR120W RCN2Q12044 265 aa4.83□□□□□ -1.64
MSH1YHR120W RGT2Q12300 763 aa4.83□□□□□ -1.64
MSH1YHR120W PFK27Q12471 397 aaPredicted RBP4.83□□□□□ -1.64
MSH1YHR120W LAG2Q92325 660 aa4.83□□□□□ -1.64
MSH1YHR120W SRN2Q99176 213 aa4.83□□□□□ -1.64
MSH1YHR120W TAF14P35189 244 aa4.82□□□□□ -1.64
MSH1YHR120W UBS1P38290 277 aa4.82□□□□□ -1.64
MSH1YHR120W AXL2P38928 823 aa4.82□□□□□ -1.64
MSH1YHR120W SOP4P39543 234 aaPredicted RBP4.82□□□□□ -1.64
MSH1YHR120W ALR2P43553 858 aa4.82□□□□□ -1.64
MSH1YHR120W GPI11Q06636 219 aa4.82□□□□□ -1.64
MSH1YHR120W NTG2Q08214 380 aa4.82□□□□□ -1.64
MSH1YHR120W GUP2Q08929 609 aa4.82□□□□□ -1.64
MSH1YHR120W YLR049CQ12110 428 aa4.82□□□□□ -1.64
MSH1YHR120W HAL9Q12180 1030 aa4.82□□□□□ -1.64
MSH1YHR120W YPL119C-AQ3E751 87 aa4.82□□□□□ -1.64
MSH1YHR120W RIB3Q99258 208 aa4.82□□□□□ -1.64
MSH1YHR120W COS2P0CX12 379 aa4.82□□□□□ -1.64
MSH1YHR120W COS3P0CX13 379 aa4.82□□□□□ -1.64
MSH1YHR120W PET122P10355 254 aa4.82□□□□□ -1.64
MSH1YHR120W ART10P18634 518 aaKnown RBP4.82□□□□□ -1.64
MSH1YHR120W PRP2P20095 876 aaPredicted RBP4.82□□□□□ -1.64
MSH1YHR120W ITR2P30606 609 aa4.82□□□□□ -1.64
MSH1YHR120W SAC1P32368 623 aaKnown RBP4.82□□□□□ -1.64
MSH1YHR120W NUF2P33895 451 aa4.82□□□□□ -1.64
MSH1YHR120W MRPL17P36528 281 aa4.82□□□□□ -1.64
MSH1YHR120W EGD2P38879 174 aaKnown RBP4.82□□□□□ -1.64
MSH1YHR120W SIT1P39980 628 aa4.82□□□□□ -1.64
MSH1YHR120W GCD10P41814 478 aa4.82□□□□□ -1.64
MSH1YHR120W COS4P43542 379 aa4.82□□□□□ -1.64
MSH1YHR120W KXD1P53158 218 aa4.82□□□□□ -1.64
MSH1YHR120W YNL260CP53846 198 aa4.82□□□□□ -1.64
MSH1YHR120W VHS1Q03785 461 aa4.82□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms