RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W VPS52P39904 641 aa9.57□□□□□ -0.88
UBA4YHR111W ICE2P40499 491 aa9.57□□□□□ -0.88
UBA4YHR111W IMA1P53051 589 aa9.57□□□□□ -0.88
UBA4YHR111W YET2Q04210 160 aa9.57□□□□□ -0.88
UBA4YHR111W ISR1Q06098 443 aaKnown RBP9.57□□□□□ -0.88
UBA4YHR111W PUN1Q06991 263 aa9.57□□□□□ -0.88
UBA4YHR111W MRP13P12686 339 aa9.56□□□□□ -0.88
UBA4YHR111W CBS2P14905 389 aa9.56□□□□□ -0.88
UBA4YHR111W CDC10P25342 322 aaKnown RBP9.56□□□□□ -0.88
UBA4YHR111W CPR3P25719 182 aa9.56□□□□□ -0.88
UBA4YHR111W BUD14P27637 709 aa9.56□□□□□ -0.88
UBA4YHR111W DCG1P32460 244 aa9.56□□□□□ -0.88
UBA4YHR111W SEC17P32602 292 aa9.56□□□□□ -0.88
UBA4YHR111W GLG1P36143 616 aa9.56□□□□□ -0.88
UBA4YHR111W ATF2P53296 535 aa9.56□□□□□ -0.88
UBA4YHR111W EFR3Q03653 782 aaKnown RBP9.56□□□□□ -0.88
UBA4YHR111W CDA1Q06702 301 aa9.56□□□□□ -0.88
UBA4YHR111W NOB1Q08444 459 aaKnown RBP9.56□□□□□ -0.88
UBA4YHR111W AKR2Q12013 749 aa9.56□□□□□ -0.88
UBA4YHR111W GLK1P17709 500 aaKnown RBP9.56□□□□□ -0.88
UBA4YHR111W APN1P22936 367 aa9.56□□□□□ -0.88
UBA4YHR111W PHO91P27514 894 aa9.56□□□□□ -0.88
UBA4YHR111W SSO1P32867 290 aa9.56□□□□□ -0.88
UBA4YHR111W SIP2P34164 415 aaKnown RBP9.56□□□□□ -0.88
UBA4YHR111W TED1P40533 473 aa9.56□□□□□ -0.88
UBA4YHR111W BAP3P41815 604 aa9.56□□□□□ -0.88
UBA4YHR111W CUP9P41817 306 aa9.56□□□□□ -0.88
UBA4YHR111W CCT7P42943 550 aaKnown RBP9.56□□□□□ -0.88
UBA4YHR111W RPM2Q02773 1202 aa9.56□□□□□ -0.88
UBA4YHR111W FMN1Q03778 218 aa9.56□□□□□ -0.88
UBA4YHR111W YHC1Q05900 231 aaKnown RBP9.56□□□□□ -0.88
UBA4YHR111W YPR174CQ06616 221 aaPredicted RBP9.56□□□□□ -0.88
UBA4YHR111W REH1Q06709 432 aa9.56□□□□□ -0.88
UBA4YHR111W RAX1Q08760 435 aa9.56□□□□□ -0.88
UBA4YHR111W TPO4Q12256 659 aa9.56□□□□□ -0.88
UBA4YHR111W NSI1Q12457 570 aa9.56□□□□□ -0.88
UBA4YHR111W YKL018C-AQ3E7A7 99 aa9.56□□□□□ -0.88
UBA4YHR111W YOR019WQ99248 730 aa9.56□□□□□ -0.88
UBA4YHR111W NAR1P23503 491 aaKnown RBP9.55□□□□□ -0.88
UBA4YHR111W ARE1P25628 610 aa9.55□□□□□ -0.88
UBA4YHR111W RPT5P33297 434 aaKnown RBP9.55□□□□□ -0.88
UBA4YHR111W AUR1P36107 401 aaPredicted RBP9.55□□□□□ -0.88
UBA4YHR111W UTP25P40498 721 aaKnown RBP9.55□□□□□ -0.88
UBA4YHR111W OCA1P50946 238 aaPredicted RBP9.55□□□□□ -0.88
UBA4YHR111W YML119WQ03208 357 aa9.55□□□□□ -0.88
UBA4YHR111W YEH1Q07804 573 aa9.55□□□□□ -0.88
UBA4YHR111W YTM1Q12024 460 aaPredicted RBP9.55□□□□□ -0.88
UBA4YHR111W MEC1P38111 2368 aa9.54□□□□□ -0.88
UBA4YHR111W PHO81P17442 1178 aa9.54□□□□□ -0.88
UBA4YHR111W DAP2P18962 818 aa9.54□□□□□ -0.88
UBA4YHR111W RVS161P25343 265 aaKnown RBP9.54□□□□□ -0.88
UBA4YHR111W GFD2P25370 566 aaKnown RBP9.54□□□□□ -0.88
UBA4YHR111W NAM9P27929 486 aa9.54□□□□□ -0.88
UBA4YHR111W RAD14P28519 371 aa9.54□□□□□ -0.88
UBA4YHR111W CTS1P29029 562 aa9.54□□□□□ -0.88
UBA4YHR111W SPC42P36094 363 aa9.54□□□□□ -0.88
UBA4YHR111W ERP5P38819 212 aa9.54□□□□□ -0.88
UBA4YHR111W SER3P40054 469 aa9.54□□□□□ -0.88
UBA4YHR111W PMT4P46971 762 aa9.54□□□□□ -0.88
UBA4YHR111W YGL260WP53056 76 aa9.54□□□□□ -0.88
UBA4YHR111W NNF2P53253 936 aa9.54□□□□□ -0.88
UBA4YHR111W VPS16Q03308 798 aa9.54□□□□□ -0.88
UBA4YHR111W YMR010WQ03687 405 aa9.54□□□□□ -0.88
UBA4YHR111W SNF8Q12483 233 aa9.54□□□□□ -0.88
UBA4YHR111W IPP1P00817 287 aaKnown RBP9.53□□□□□ -0.88
UBA4YHR111W CBP2P03874 630 aaPredicted RBP9.53□□□□□ -0.88
UBA4YHR111W ARG81P05085 880 aa9.53□□□□□ -0.88
UBA4YHR111W UNG1P12887 359 aa9.53□□□□□ -0.88
UBA4YHR111W VPS41P38959 992 aa9.53□□□□□ -0.88
UBA4YHR111W AIM2P39721 246 aa9.53□□□□□ -0.88
UBA4YHR111W GAB1P41733 394 aa9.53□□□□□ -0.88
UBA4YHR111W RHO4Q00246 291 aa9.53□□□□□ -0.88
UBA4YHR111W YMR210WQ03649 449 aa9.53□□□□□ -0.88
UBA4YHR111W NUP53Q03790 475 aa9.53□□□□□ -0.88
UBA4YHR111W GMC2Q06201 188 aa9.53□□□□□ -0.88
UBA4YHR111W MCH5Q08777 521 aa9.53□□□□□ -0.88
UBA4YHR111W TMS1Q12116 473 aa9.53□□□□□ -0.88
UBA4YHR111W YVC1Q12324 675 aa9.53□□□□□ -0.88
UBA4YHR111W CCA1P21269 546 aa9.52□□□□□ -0.89
UBA4YHR111W STP22P25604 385 aa9.52□□□□□ -0.89
UBA4YHR111W PTR2P32901 601 aa9.52□□□□□ -0.89
UBA4YHR111W MSN2P33748 704 aa9.52□□□□□ -0.89
UBA4YHR111W RFC3P38629 340 aa9.52□□□□□ -0.89
UBA4YHR111W STP2P38704 541 aa9.52□□□□□ -0.89
UBA4YHR111W GIP2P40036 548 aa9.52□□□□□ -0.89
UBA4YHR111W SPT20P50875 604 aa9.52□□□□□ -0.89
UBA4YHR111W MAL11P53048 616 aa9.52□□□□□ -0.89
UBA4YHR111W ARC35P53731 342 aaKnown RBP9.52□□□□□ -0.89
UBA4YHR111W SUB1P54000 292 aaKnown RBP9.52□□□□□ -0.89
UBA4YHR111W RAP1P11938 827 aa9.51□□□□□ -0.89
UBA4YHR111W KAE1P36132 386 aa9.51□□□□□ -0.89
UBA4YHR111W MRPL17P36528 281 aa9.51□□□□□ -0.89
UBA4YHR111W YBR139WP38109 508 aa9.51□□□□□ -0.89
UBA4YHR111W CIN4P39110 191 aa9.51□□□□□ -0.89
UBA4YHR111W CDH1P53197 566 aa9.51□□□□□ -0.89
UBA4YHR111W REX3Q12090 404 aa9.51□□□□□ -0.89
UBA4YHR111W RIB2Q12362 591 aaKnown RBP9.51□□□□□ -0.89
UBA4YHR111W YKL033W-AQ86ZR7 236 aa9.51□□□□□ -0.89
UBA4YHR111W YCR102CP25608 368 aa9.5□□□□□ -0.89
UBA4YHR111W BET3P36149 193 aa9.5□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms