RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C SOL4P53315 255 aa3.52□□□□□ -1.85
PDX1YGR193C YSA1Q01976 231 aa3.52□□□□□ -1.85
PDX1YGR193C UTP6Q02354 440 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C CWC27Q02770 301 aa3.52□□□□□ -1.85
PDX1YGR193C SKI8Q02793 397 aaPredicted RBP3.52□□□□□ -1.85
PDX1YGR193C NGL2Q03264 515 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C APC4Q04601 652 aa3.52□□□□□ -1.85
PDX1YGR193C SOV1Q04748 898 aa3.52□□□□□ -1.85
PDX1YGR193C YEH1Q07804 573 aa3.52□□□□□ -1.85
PDX1YGR193C DIS3Q08162 1001 aaKnown RBP3.52□□□□□ -1.85
PDX1YGR193C NRT1Q08485 598 aa3.52□□□□□ -1.85
PDX1YGR193C UAF30Q08747 228 aa3.52□□□□□ -1.85
PDX1YGR193C FYV7Q12247 151 aa3.52□□□□□ -1.85
PDX1YGR193C YLR108CQ12259 485 aa3.52□□□□□ -1.85
PDX1YGR193C EMP46Q12396 444 aa3.52□□□□□ -1.85
PDX1YGR193C ATG31Q12421 196 aa3.52□□□□□ -1.85
PDX1YGR193C ARP6Q12509 438 aa3.52□□□□□ -1.85
PDX1YGR193C YOR111WQ99210 232 aa3.52□□□□□ -1.85
PDX1YGR193C Q0144Q9ZZW2 109 aa3.52□□□□□ -1.85
PDX1YGR193C STH1P32597 1359 aa3.51□□□□□ -1.85
PDX1YGR193C SCEIP03882 235 aa3.51□□□□□ -1.85
PDX1YGR193C DST1P07273 309 aa3.51□□□□□ -1.85
PDX1YGR193C REV1P12689 985 aa3.51□□□□□ -1.85
PDX1YGR193C PEP5P12868 1029 aa3.51□□□□□ -1.85
PDX1YGR193C SNA3P14359 133 aa3.51□□□□□ -1.85
PDX1YGR193C KRS1P15180 591 aaKnown RBP3.51□□□□□ -1.85
PDX1YGR193C FRS2P15625 503 aaKnown RBP3.51□□□□□ -1.85
PDX1YGR193C ACO1P19414 778 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
PDX1YGR193C AAT2P23542 418 aaKnown RBP3.51□□□□□ -1.85
PDX1YGR193C MEK1P24719 497 aaPredicted RBP3.51□□□□□ -1.85
PDX1YGR193C RPC19P28000 142 aaKnown RBP3.51□□□□□ -1.85
PDX1YGR193C FUN26P31381 517 aa3.51□□□□□ -1.85
PDX1YGR193C ICS2P38284 255 aa3.51□□□□□ -1.85
PDX1YGR193C LSM12P38828 187 aaKnown RBP3.51□□□□□ -1.85
PDX1YGR193C CYC2P38909 366 aa3.51□□□□□ -1.85
PDX1YGR193C YEL057CP39983 233 aa3.51□□□□□ -1.85
PDX1YGR193C YER121WP40076 114 aa3.51□□□□□ -1.85
PDX1YGR193C SLZ1P40167 298 aa3.51□□□□□ -1.85
PDX1YGR193C RGI2P40188 164 aa3.51□□□□□ -1.85
PDX1YGR193C YMR147WP40218 223 aaKnown RBP3.51□□□□□ -1.85
PDX1YGR193C PFK26P40433 827 aaKnown RBP3.51□□□□□ -1.85
PDX1YGR193C SDP1P40479 209 aa3.51□□□□□ -1.85
PDX1YGR193C NMD5P46970 1048 aa3.51□□□□□ -1.85
PDX1YGR193C HIT1P46973 164 aa3.51□□□□□ -1.85
PDX1YGR193C YJR141WP47172 347 aaPredicted RBP3.51□□□□□ -1.85
PDX1YGR193C DIA3P52290 468 aa3.51□□□□□ -1.85
PDX1YGR193C MRPS35P53292 345 aa3.51□□□□□ -1.85
PDX1YGR193C SQS1P53866 767 aaKnown RBP3.51□□□□□ -1.85
PDX1YGR193C RHO5P53879 331 aaKnown RBP3.51□□□□□ -1.85
PDX1YGR193C YMR209CQ03648 457 aa3.51□□□□□ -1.85
PDX1YGR193C RUB1Q03919 77 aa3.51□□□□□ -1.85
PDX1YGR193C YHM2Q04013 314 aa3.51□□□□□ -1.85
PDX1YGR193C SNX41Q04053 625 aa3.51□□□□□ -1.85
PDX1YGR193C PPN1Q04119 674 aa3.51□□□□□ -1.85
PDX1YGR193C YDR514CQ04408 483 aa3.51□□□□□ -1.85
PDX1YGR193C SWF1Q04629 336 aa3.51□□□□□ -1.85
PDX1YGR193C DXO1Q06349 442 aa3.51□□□□□ -1.85
PDX1YGR193C YPR127WQ06494 345 aa3.51□□□□□ -1.85
PDX1YGR193C CDD1Q06549 142 aa3.51□□□□□ -1.85
PDX1YGR193C MFG1Q07684 458 aa3.51□□□□□ -1.85
PDX1YGR193C BSC6Q08280 497 aa3.51□□□□□ -1.85
PDX1YGR193C DIA2Q08496 732 aaPredicted RBP3.51□□□□□ -1.85
PDX1YGR193C MET7Q08645 548 aa3.51□□□□□ -1.85
PDX1YGR193C BTS1Q12051 335 aa3.51□□□□□ -1.85
PDX1YGR193C SFM1Q12314 213 aa3.51□□□□□ -1.85
PDX1YGR193C GPR1Q12361 961 aa3.51□□□□□ -1.85
PDX1YGR193C RPN6Q12377 434 aa3.51□□□□□ -1.85
PDX1YGR193C SNF8Q12483 233 aa3.51□□□□□ -1.85
PDX1YGR193C WIP1Q2V2P8 89 aa3.51□□□□□ -1.85
PDX1YGR193C RPO41P13433 1351 aaKnown RBP3.51□□□□□ -1.85
PDX1YGR193C YLR278CQ05854 1341 aa3.5□□□□□ -1.85
PDX1YGR193C MDS3P53094 1487 aa3.5□□□□□ -1.85
PDX1YGR193C ATP2P00830 511 aaKnown RBP3.5□□□□□ -1.85
PDX1YGR193C ILV5P06168 395 aaKnown RBP3.5□□□□□ -1.85
PDX1YGR193C CDC33P07260 213 aaKnown RBP3.5□□□□□ -1.85
PDX1YGR193C DFR1P07807 211 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
PDX1YGR193C ERG20P08524 352 aaKnown RBP3.5□□□□□ -1.85
PDX1YGR193C CBS2P14905 389 aa3.5□□□□□ -1.85
PDX1YGR193C SAR1P20606 190 aaKnown RBP3.5□□□□□ -1.85
PDX1YGR193C YCK1P23291 538 aa3.5□□□□□ -1.85
PDX1YGR193C RNA15P25299 296 aaPredicted RBP3.5□□□□□ -1.85
PDX1YGR193C SYN8P31377 255 aa3.5□□□□□ -1.85
PDX1YGR193C PDB1P32473 366 aaKnown RBP3.5□□□□□ -1.85
PDX1YGR193C SPT10P35208 640 aa3.5□□□□□ -1.85
PDX1YGR193C OAF3P36023 863 aa3.5□□□□□ -1.85
PDX1YGR193C MRPL7P36519 292 aa3.5□□□□□ -1.85
PDX1YGR193C HEK2P38199 381 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
PDX1YGR193C RRT2P38332 387 aa3.5□□□□□ -1.85
PDX1YGR193C PRP39P39682 629 aaKnown RBP3.5□□□□□ -1.85
PDX1YGR193C NUP60P39705 539 aa3.5□□□□□ -1.85
PDX1YGR193C SSP120P39931 234 aaKnown RBP3.5□□□□□ -1.85
PDX1YGR193C YAT2P40017 923 aa3.5□□□□□ -1.85
PDX1YGR193C SCS2P40075 244 aaKnown RBP3.5□□□□□ -1.85
PDX1YGR193C ELO3P40319 345 aa3.5□□□□□ -1.85
PDX1YGR193C CDC40P40968 455 aaPredicted RBP3.5□□□□□ -1.85
PDX1YGR193C TDA10P42938 290 aa3.5□□□□□ -1.85
PDX1YGR193C COS4P43542 379 aa3.5□□□□□ -1.85
PDX1YGR193C TOS3P43637 560 aa3.5□□□□□ -1.85
PDX1YGR193C YJR149WP47177 404 aa3.5□□□□□ -1.85
PDX1YGR193C RPS7BP48164 190 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 66.8 ms