RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W UIP4Q08926 304 aa4.2□□□□□ -1.74
PRE9YGR135W RKM1Q08961 583 aaPredicted RBP4.2□□□□□ -1.74
PRE9YGR135W AVL9Q12500 764 aa4.2□□□□□ -1.74
PRE9YGR135W TAD3Q9URQ3 322 aa4.2□□□□□ -1.74
PRE9YGR135W MYO1P08964 1928 aa4.19□□□□□ -1.74
PRE9YGR135W RPL3P14126 387 aaKnown RBP4.19□□□□□ -1.74
PRE9YGR135W CDC42P19073 191 aa4.19□□□□□ -1.74
PRE9YGR135W FUB1P25659 250 aa4.19□□□□□ -1.74
PRE9YGR135W HRR25P29295 494 aaKnown RBP4.19□□□□□ -1.74
PRE9YGR135W ZIP1P31111 875 aa4.19□□□□□ -1.74
PRE9YGR135W PMT1P33775 817 aa4.19□□□□□ -1.74
PRE9YGR135W SDH8P38345 138 aa4.19□□□□□ -1.74
PRE9YGR135W PHO89P38361 574 aa4.19□□□□□ -1.74
PRE9YGR135W YHR054CP38780 354 aa4.19□□□□□ -1.74
PRE9YGR135W ARO9P38840 513 aaPredicted RBP4.19□□□□□ -1.74
PRE9YGR135W HRB1P38922 454 aaKnown RBP RIP-Chip data4.19□□□□□ -1.74not detected
PRE9YGR135W SEO1P39709 593 aa4.19□□□□□ -1.74
PRE9YGR135W AVT6P40074 448 aa4.19□□□□□ -1.74
PRE9YGR135W SCC4P40090 624 aa4.19□□□□□ -1.74
PRE9YGR135W BUR6P40096 142 aa4.19□□□□□ -1.74
PRE9YGR135W CTK2P46962 323 aa4.19□□□□□ -1.74
PRE9YGR135W UBX6P47049 396 aa4.19□□□□□ -1.74
PRE9YGR135W PET130P47065 347 aa4.19□□□□□ -1.74
PRE9YGR135W YJR054WP47114 497 aa4.19□□□□□ -1.74
PRE9YGR135W TRF5P48561 642 aaKnown RBP4.19□□□□□ -1.74
PRE9YGR135W OCA1P50946 238 aaPredicted RBP4.19□□□□□ -1.74
PRE9YGR135W IMO32P53219 342 aa4.19□□□□□ -1.74
PRE9YGR135W YPL107WQ02873 248 aa4.19□□□□□ -1.74
PRE9YGR135W YML108WQ03759 105 aa4.19□□□□□ -1.74
PRE9YGR135W COA4Q05809 96 aa4.19□□□□□ -1.74
PRE9YGR135W THI7Q05998 598 aa4.19□□□□□ -1.74
PRE9YGR135W SEC10Q06245 871 aa4.19□□□□□ -1.74
PRE9YGR135W CRN1Q06440 651 aa4.19□□□□□ -1.74
PRE9YGR135W THI20Q08224 551 aa4.19□□□□□ -1.74
PRE9YGR135W PCL8Q08966 492 aa4.19□□□□□ -1.74
PRE9YGR135W SPE3Q12074 293 aaKnown RBP4.19□□□□□ -1.74
PRE9YGR135W BBP1Q12365 385 aa4.19□□□□□ -1.74
PRE9YGR135W CTF3Q12748 733 aa4.19□□□□□ -1.74
PRE9YGR135W YBR255C-AQ3E776 120 aa4.19□□□□□ -1.74
PRE9YGR135W BRR1Q99177 341 aaPredicted RBP4.19□□□□□ -1.74
PRE9YGR135W AI5_ALPHAQ9ZZX1 630 aa4.19□□□□□ -1.74
PRE9YGR135W REP1P03871 373 aa4.18□□□□□ -1.74
PRE9YGR135W PAB1P04147 577 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74 RIP-Chip
PRE9YGR135W TCP1P12612 559 aaKnown RBP4.18□□□□□ -1.74
PRE9YGR135W SLY1P22213 666 aa4.18□□□□□ -1.74
PRE9YGR135W CPR2P23285 205 aa4.18□□□□□ -1.74
PRE9YGR135W SYN8P31377 255 aa4.18□□□□□ -1.74
PRE9YGR135W MSS1P32559 526 aaPredicted RBP4.18□□□□□ -1.74
PRE9YGR135W UGP1P32861 499 aaKnown RBP4.18□□□□□ -1.74
PRE9YGR135W CYM1P32898 989 aa4.18□□□□□ -1.74
PRE9YGR135W SEF1P34228 1148 aa4.18□□□□□ -1.74
PRE9YGR135W KDX1P36005 433 aa4.18□□□□□ -1.74
PRE9YGR135W CMC1P36064 111 aa4.18□□□□□ -1.74
PRE9YGR135W GEX2P36173 615 aa4.18□□□□□ -1.74
PRE9YGR135W YBR139WP38109 508 aa4.18□□□□□ -1.74
PRE9YGR135W SHC1P39000 512 aa4.18□□□□□ -1.74
PRE9YGR135W FAA2P39518 744 aa4.18□□□□□ -1.74
PRE9YGR135W FIS1P40515 155 aa4.18□□□□□ -1.74
PRE9YGR135W MDE1P47095 244 aa4.18□□□□□ -1.74
PRE9YGR135W RPS7BP48164 190 aaKnown RBP4.18□□□□□ -1.74
PRE9YGR135W STR3P53101 465 aaKnown RBP4.18□□□□□ -1.74
PRE9YGR135W LSG1P53145 640 aaKnown RBP4.18□□□□□ -1.74
PRE9YGR135W RSM28Q03430 361 aa4.18□□□□□ -1.74
PRE9YGR135W YMR209CQ03648 457 aa4.18□□□□□ -1.74
PRE9YGR135W ARX1Q03862 593 aaKnown RBP4.18□□□□□ -1.74
PRE9YGR135W YMR226CQ05016 267 aaKnown RBP4.18□□□□□ -1.74
PRE9YGR135W YLR456WQ06199 204 aa4.18□□□□□ -1.74
PRE9YGR135W AAD15Q08361 143 aa4.18□□□□□ -1.74
PRE9YGR135W REX3Q12090 404 aa4.18□□□□□ -1.74
PRE9YGR135W PRS5Q12265 496 aaKnown RBP4.18□□□□□ -1.74
PRE9YGR135W HER1Q12276 1246 aa4.18□□□□□ -1.74
PRE9YGR135W EMP46Q12396 444 aa4.18□□□□□ -1.74
PRE9YGR135W AI5_BETAQ9ZZX0 354 aa4.18□□□□□ -1.74
PRE9YGR135W CAR1P00812 333 aaKnown RBP4.17□□□□□ -1.74
PRE9YGR135W MF(ALPHA)1P01149 165 aa4.17□□□□□ -1.74
PRE9YGR135W RHO1P06780 209 aaKnown RBP4.17□□□□□ -1.74
PRE9YGR135W GPA2P10823 449 aa4.17□□□□□ -1.74
PRE9YGR135W YPK1P12688 680 aaKnown RBP4.17□□□□□ -1.74
PRE9YGR135W RSR1P13856 272 aa4.17□□□□□ -1.74
PRE9YGR135W ABF1P14164 731 aa4.17□□□□□ -1.74
PRE9YGR135W KSS1P14681 368 aa4.17□□□□□ -1.74
PRE9YGR135W CTR86P25355 563 aa4.17□□□□□ -1.74
PRE9YGR135W CYS4P32582 507 aaKnown RBP4.17□□□□□ -1.74
PRE9YGR135W PHO11P35842 467 aa4.17□□□□□ -1.74
PRE9YGR135W YPK3P38070 525 aa4.17□□□□□ -1.74
PRE9YGR135W YBR053CP38235 358 aa4.17□□□□□ -1.74
PRE9YGR135W PHO12P38693 467 aa4.17□□□□□ -1.74
PRE9YGR135W YHR097CP38809 366 aaKnown RBP4.17□□□□□ -1.74
PRE9YGR135W BZZ1P38822 633 aa4.17□□□□□ -1.74
PRE9YGR135W MTG2P38860 518 aa4.17□□□□□ -1.74
PRE9YGR135W CCT6P39079 546 aa4.17□□□□□ -1.74
PRE9YGR135W ELO3P40319 345 aa4.17□□□□□ -1.74
PRE9YGR135W ATF1P40353 525 aa4.17□□□□□ -1.74
PRE9YGR135W AGP3P43548 558 aa4.17□□□□□ -1.74
PRE9YGR135W BIR1P47134 954 aa4.17□□□□□ -1.74
PRE9YGR135W UBC11P52492 156 aa4.17□□□□□ -1.74
PRE9YGR135W MNP1P53163 194 aaPredicted RBP4.17□□□□□ -1.74
PRE9YGR135W GET1P53192 235 aa4.17□□□□□ -1.74
PRE9YGR135W FHN1P53279 174 aa4.17□□□□□ -1.74
PRE9YGR135W NOP19P53317 196 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms