RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C NAB2P32505 525 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
SPT4YGR063C VPH1P32563 840 aaKnown RBP3.38□□□□□ -1.87
SPT4YGR063C SKG6P32900 734 aaPredicted RBP3.38□□□□□ -1.87
SPT4YGR063C MRPL6P32904 214 aa3.38□□□□□ -1.87
SPT4YGR063C MDL2P33311 773 aa3.38□□□□□ -1.87
SPT4YGR063C ECT1P33412 323 aa3.38□□□□□ -1.87
SPT4YGR063C YKR051WP36142 418 aa3.38□□□□□ -1.87
SPT4YGR063C TCM62P38228 572 aaKnown RBP3.38□□□□□ -1.87
SPT4YGR063C FTH1P38310 465 aa3.38□□□□□ -1.87
SPT4YGR063C CBR1P38626 284 aaKnown RBP3.38□□□□□ -1.87
SPT4YGR063C LAG1P38703 411 aa3.38□□□□□ -1.87
SPT4YGR063C RRP3P38712 501 aaKnown RBP3.38□□□□□ -1.87
SPT4YGR063C YAP1801P38856 637 aa3.38□□□□□ -1.87
SPT4YGR063C XDJ1P39102 459 aa3.38□□□□□ -1.87
SPT4YGR063C SAW1P39735 261 aa3.38□□□□□ -1.87
SPT4YGR063C NPR2P39923 615 aa3.38□□□□□ -1.87
SPT4YGR063C AVT2P39981 480 aa3.38□□□□□ -1.87
SPT4YGR063C YER010CP40011 234 aa3.38□□□□□ -1.87
SPT4YGR063C SCC4P40090 624 aa3.38□□□□□ -1.87
SPT4YGR063C SLZ1P40167 298 aa3.38□□□□□ -1.87
SPT4YGR063C MMF1P40185 145 aaKnown RBP3.38□□□□□ -1.87
SPT4YGR063C NTA1P40354 457 aa3.38□□□□□ -1.87
SPT4YGR063C QDR1P40475 563 aa3.38□□□□□ -1.87
SPT4YGR063C IMA5P40884 581 aa3.38□□□□□ -1.87
SPT4YGR063C RRN7P40992 514 aa3.38□□□□□ -1.87
SPT4YGR063C AGX1P43567 385 aa3.38□□□□□ -1.87
SPT4YGR063C GAT1P43574 510 aa3.38□□□□□ -1.87
SPT4YGR063C VTC4P47075 721 aa3.38□□□□□ -1.87
SPT4YGR063C ACF4P47129 309 aa3.38□□□□□ -1.87
SPT4YGR063C CLA4P48562 842 aa3.38□□□□□ -1.87
SPT4YGR063C RPS12P48589 143 aaKnown RBP3.38□□□□□ -1.87
SPT4YGR063C NBP1P52919 319 aaPredicted RBP3.38□□□□□ -1.87
SPT4YGR063C NQM1P53228 333 aaPredicted RBP3.38□□□□□ -1.87
SPT4YGR063C VPS62P53285 467 aa3.38□□□□□ -1.87
SPT4YGR063C BUD32P53323 261 aa3.38□□□□□ -1.87
SPT4YGR063C MKC7P53379 596 aa3.38□□□□□ -1.87
SPT4YGR063C YNR021WP53723 404 aaKnown RBP3.38□□□□□ -1.87
SPT4YGR063C INN1P53901 409 aa3.38□□□□□ -1.87
SPT4YGR063C NIS1P53939 407 aa3.38□□□□□ -1.87
SPT4YGR063C SLM2P53955 656 aa3.38□□□□□ -1.87
SPT4YGR063C NAM8Q00539 523 aaKnown RBP3.38□□□□□ -1.87
SPT4YGR063C MRPS17Q03246 237 aaPredicted RBP3.38□□□□□ -1.87
SPT4YGR063C RUB1Q03919 77 aa3.38□□□□□ -1.87
SPT4YGR063C RCO1Q04779 684 aa3.38□□□□□ -1.87
SPT4YGR063C GAD1Q04792 585 aa3.38□□□□□ -1.87
SPT4YGR063C YDR222WQ04925 415 aa3.38□□□□□ -1.87
SPT4YGR063C ISR1Q06098 443 aaKnown RBP3.38□□□□□ -1.87
SPT4YGR063C YPR109WQ06104 294 aa3.38□□□□□ -1.87
SPT4YGR063C OPT2Q06593 877 aa3.38□□□□□ -1.87
SPT4YGR063C RAD34Q06665 692 aa3.38□□□□□ -1.87
SPT4YGR063C YLR413WQ06689 675 aa3.38□□□□□ -1.87
SPT4YGR063C GRC3Q07845 632 aa3.38□□□□□ -1.87
SPT4YGR063C YOL019WQ08157 551 aa3.38□□□□□ -1.87
SPT4YGR063C ATX2Q12067 313 aa3.38□□□□□ -1.87
SPT4YGR063C APC9Q12107 265 aa3.38□□□□□ -1.87
SPT4YGR063C SPC3Q12133 184 aa3.38□□□□□ -1.87
SPT4YGR063C YDR018CQ12185 396 aa3.38□□□□□ -1.87
SPT4YGR063C LCB4Q12246 624 aa3.38□□□□□ -1.87
SPT4YGR063C YLR046CQ12253 270 aa3.38□□□□□ -1.87
SPT4YGR063C PST2Q12335 198 aaKnown RBP3.38□□□□□ -1.87
SPT4YGR063C ECM3Q99252 613 aa3.38□□□□□ -1.87
SPT4YGR063C CYC1P00044 109 aaPredicted RBP3.37□□□□□ -1.87
SPT4YGR063C CIT1P00890 479 aa3.37□□□□□ -1.87
SPT4YGR063C HTB1P02293 131 aaKnown RBP3.37□□□□□ -1.87
SPT4YGR063C HTB2P02294 131 aa3.37□□□□□ -1.87
SPT4YGR063C CDC7P06243 507 aa3.37□□□□□ -1.87
SPT4YGR063C RHO2P06781 192 aa3.37□□□□□ -1.87
SPT4YGR063C ATP1P07251 545 aaKnown RBP3.37□□□□□ -1.87
SPT4YGR063C MET2P08465 486 aa3.37□□□□□ -1.87
SPT4YGR063C SSA3P09435 649 aaKnown RBP3.37□□□□□ -1.87
SPT4YGR063C RPL31AP0C2H8 113 aaKnown RBP3.37□□□□□ -1.87
SPT4YGR063C RPL31BP0C2H9 113 aaKnown RBP3.37□□□□□ -1.87
SPT4YGR063C MAS2P11914 482 aa3.37□□□□□ -1.87
SPT4YGR063C TCP1P12612 559 aaKnown RBP3.37□□□□□ -1.87
SPT4YGR063C PUT4P15380 627 aa3.37□□□□□ -1.87
SPT4YGR063C EST1P17214 699 aaPredicted RBP3.37□□□□□ -1.87
SPT4YGR063C YPK2P18961 677 aa3.37□□□□□ -1.87
SPT4YGR063C SIR1P21691 654 aa3.37□□□□□ -1.87
SPT4YGR063C IFM1P25038 676 aa3.37□□□□□ -1.87
SPT4YGR063C UBC8P28263 218 aa3.37□□□□□ -1.87
SPT4YGR063C TRK2P28584 889 aa3.37□□□□□ -1.87
SPT4YGR063C FAA1P30624 700 aaKnown RBP3.37□□□□□ -1.87
SPT4YGR063C PRO3P32263 286 aaKnown RBP3.37□□□□□ -1.87
SPT4YGR063C NUD1P32336 851 aa3.37□□□□□ -1.87
SPT4YGR063C MEI5P32489 222 aa3.37□□□□□ -1.87
SPT4YGR063C GSP1P32835 219 aaKnown RBP3.37□□□□□ -1.87
SPT4YGR063C GSP2P32836 220 aaKnown RBP3.37□□□□□ -1.87
SPT4YGR063C SER1P33330 395 aaKnown RBP3.37□□□□□ -1.87
SPT4YGR063C DHR2P36009 735 aaPredicted RBP3.37□□□□□ -1.87
SPT4YGR063C YKL162CP36052 402 aa3.37□□□□□ -1.87
SPT4YGR063C AIM29P36154 155 aa3.37□□□□□ -1.87
SPT4YGR063C APT2P36973 181 aa3.37□□□□□ -1.87
SPT4YGR063C APL3P38065 1025 aa3.37□□□□□ -1.87
SPT4YGR063C POA1P38218 177 aa3.37□□□□□ -1.87
SPT4YGR063C UBX7P38349 436 aa3.37□□□□□ -1.87
SPT4YGR063C PHO89P38361 574 aa3.37□□□□□ -1.87
SPT4YGR063C RCK1P38622 512 aa3.37□□□□□ -1.87
SPT4YGR063C KSP1P38691 1029 aaKnown RBP3.37□□□□□ -1.87
SPT4YGR063C HSE1P38753 452 aa3.37□□□□□ -1.87
SPT4YGR063C FSH1P38777 243 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms