RNA–Protein interactions for RNA: YFL048C

EMP47, Transcript of Integral membrane component of ER-derived COPII-coated vesicles, yeast

Gene EMP47, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EMP47	YFL048C	RCN1	P36054	211 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	ROT2	P38138	954 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	MRP21	P38175	177 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	EGD2	P38879	174 aa	Known RBP	4.13	□□□□□ -1.75
EMP47	YFL048C	YHR218W	P38899	603 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	PRM9	P39551	298 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	AST2	P39945	430 aa	Known RBP	4.13	□□□□□ -1.75
EMP47	YFL048C	YEN1	P40028	759 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	MET18	P40469	1032 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	YIL077C	P40508	320 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	SYG1	P40528	902 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	CDC1	P40986	491 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	ROK1	P45818	564 aa	Predicted RBP	4.13	□□□□□ -1.75
EMP47	YFL048C	NET1	P47035	1189 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	DIA3	P52290	468 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	IMO32	P53219	342 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	GTR2	P53290	341 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
EMP47	YFL048C	YNL018C	P53976	612 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	TIM11	P81449	96 aa	Predicted RBP	4.13	□□□□□ -1.75
EMP47	YFL048C	ENT5	Q03769	411 aa	Known RBP	4.13	□□□□□ -1.75
EMP47	YFL048C	YDR131C	Q03899	556 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	RPN9	Q04062	393 aa	Known RBP	4.13	□□□□□ -1.75
EMP47	YFL048C	RAD33	Q04231	177 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	PEX12	Q04370	399 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	ERB1	Q04660	807 aa	Known RBP	4.13	□□□□□ -1.75
EMP47	YFL048C	RIF2	Q06208	395 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	GPI11	Q06636	219 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	YFT2	Q06676	274 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
EMP47	YFL048C	YOL019W	Q08157	551 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	RSA1	Q08932	381 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	TPK3	P05986	398 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	COS2	P0CX12	379 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	COS3	P0CX13	379 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	PET122	P10355	254 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	POX1	P13711	748 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	PUP3	P25451	205 aa	Known RBP	4.12	□□□□□ -1.75
EMP47	YFL048C	YIH1	P25637	258 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	CMK1	P27466	446 aa	Known RBP	4.12	□□□□□ -1.75
EMP47	YFL048C	PHO91	P27514	894 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	PEX3	P28795	441 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	VMA6	P32366	345 aa	Known RBP	4.12	□□□□□ -1.75
EMP47	YFL048C	MEI5	P32489	222 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	PRP19	P32523	503 aa	Known RBP	4.12	□□□□□ -1.75
EMP47	YFL048C	MRPL17	P36528	281 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	COS111	P38308	924 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	MUP3	P38734	546 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	RBG1	P39729	369 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	KRE29	P40026	464 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	UTP18	P40362	594 aa	Predicted RBP	4.12	□□□□□ -1.75
EMP47	YFL048C	COS4	P43542	379 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	EFM3	P47163	339 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	PMT3	P47190	753 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	UPF3	P48412	387 aa	Known RBP	4.12	□□□□□ -1.75
EMP47	YFL048C	KEL2	P50090	882 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	PSP1	P50896	841 aa	Known RBP	4.12	□□□□□ -1.75
EMP47	YFL048C	BOL2	P53082	120 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	EFM5	P53200	248 aa	Known RBP	4.12	□□□□□ -1.75
EMP47	YFL048C	IBD2	P53892	351 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	COG5	P53951	403 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	PRP38	Q00723	242 aa	Predicted RBP	4.12	□□□□□ -1.75
EMP47	YFL048C	SPR6	Q01684	191 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	RSC9	Q03124	581 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	TLG1	Q03322	224 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	GOT1	Q03554	138 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	PPN1	Q04119	674 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	SPG3	Q04398	127 aa	Predicted RBP	4.12	□□□□□ -1.75
EMP47	YFL048C	HRD3	Q05787	833 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	COA4	Q05809	96 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	COQ11	Q05892	277 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	SSQ1	Q05931	657 aa	Predicted RBP	4.12	□□□□□ -1.75
EMP47	YFL048C	SWC7	Q06707	132 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	YDL073W	Q07454	984 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	THI73	Q07904	523 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	DNL4	Q08387	944 aa	Predicted RBP	4.12	□□□□□ -1.75
EMP47	YFL048C	GPM2	Q12008	311 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	YLR049C	Q12110	428 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	NBP2	Q12163	236 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
EMP47	YFL048C	ARP7	Q12406	477 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	PFK27	Q12471	397 aa	Predicted RBP	4.12	□□□□□ -1.75
EMP47	YFL048C	RMD5	Q12508	421 aa		4.12	□□□□□ -1.75
EMP47	YFL048C	TIM9	O74700	87 aa		4.11	□□□□□ -1.75
EMP47	YFL048C	HIS1	P00498	297 aa	Known RBP	4.11	□□□□□ -1.75
EMP47	YFL048C	CBP2	P03874	630 aa	Predicted RBP	4.11	□□□□□ -1.75
EMP47	YFL048C	HEM2	P05373	342 aa		4.11	□□□□□ -1.75
EMP47	YFL048C	MRP13	P12686	339 aa		4.11	□□□□□ -1.75
EMP47	YFL048C	AMD1	P15274	810 aa	Known RBP	4.11	□□□□□ -1.75
EMP47	YFL048C	RPB4	P20433	221 aa	Predicted RBP	4.11	□□□□□ -1.75
EMP47	YFL048C	CMK2	P22517	447 aa		4.11	□□□□□ -1.75
EMP47	YFL048C	VPS3	P23643	1011 aa		4.11	□□□□□ -1.75
EMP47	YFL048C	YCR099C	P25657	155 aa		4.11	□□□□□ -1.75
EMP47	YFL048C	SYN8	P31377	255 aa		4.11	□□□□□ -1.75
EMP47	YFL048C	ACH1	P32316	526 aa		4.11	□□□□□ -1.75
EMP47	YFL048C	MSS51	P32335	436 aa		4.11	□□□□□ -1.75
EMP47	YFL048C	SKT5	P34226	696 aa		4.11	□□□□□ -1.75
EMP47	YFL048C	FLO10	P36170	1169 aa		4.11	□□□□□ -1.75
EMP47	YFL048C	APL3	P38065	1025 aa		4.11	□□□□□ -1.75
EMP47	YFL048C	ECM8	P38246	354 aa		4.11	□□□□□ -1.75

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