RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C IMG1P25626 169 aa3.66□□□□□ -1.82
OTU1YFL044C PRE2P30656 287 aaKnown RBP3.66□□□□□ -1.82
OTU1YFL044C SIN4P32259 974 aa3.66□□□□□ -1.82
OTU1YFL044C NDI1P32340 513 aa3.66□□□□□ -1.82
OTU1YFL044C SMI1P32566 505 aa3.66□□□□□ -1.82
OTU1YFL044C GDA1P32621 518 aa3.66□□□□□ -1.82
OTU1YFL044C DHR2P36009 735 aaPredicted RBP3.66□□□□□ -1.82
OTU1YFL044C YPT52P36018 234 aaKnown RBP3.66□□□□□ -1.82
OTU1YFL044C RPF2P36160 344 aaKnown RBP3.66□□□□□ -1.82
OTU1YFL044C MRPL15P36523 253 aa3.66□□□□□ -1.82
OTU1YFL044C MAK5P38112 773 aaPredicted RBP3.66□□□□□ -1.82
OTU1YFL044C RCK2P38623 610 aa3.66□□□□□ -1.82
OTU1YFL044C GIM4P40005 111 aaKnown RBP3.66□□□□□ -1.82
OTU1YFL044C ALG8P40351 577 aa3.66□□□□□ -1.82
OTU1YFL044C FHN1P53279 174 aa3.66□□□□□ -1.82
OTU1YFL044C ARE2P53629 642 aaKnown RBP3.66□□□□□ -1.82
OTU1YFL044C MRPL19P53875 158 aa3.66□□□□□ -1.82
OTU1YFL044C PEX25Q02969 394 aa3.66□□□□□ -1.82
OTU1YFL044C TRS31Q03337 283 aa3.66□□□□□ -1.82
OTU1YFL044C YKU80Q04437 629 aa3.66□□□□□ -1.82
OTU1YFL044C RCO1Q04779 684 aa3.66□□□□□ -1.82
OTU1YFL044C RSF1Q05043 376 aa3.66□□□□□ -1.82
OTU1YFL044C RRP45Q05636 305 aaKnown RBP3.66□□□□□ -1.82
OTU1YFL044C MLH3Q12083 715 aa3.66□□□□□ -1.82
OTU1YFL044C TMS1Q12116 473 aa3.66□□□□□ -1.82
OTU1YFL044C LAG2Q92325 660 aa3.66□□□□□ -1.82
OTU1YFL044C BCY1P07278 416 aaKnown RBP3.65□□□□□ -1.83
OTU1YFL044C HOM3P10869 527 aa3.65□□□□□ -1.83
OTU1YFL044C SEC12P11655 471 aa3.65□□□□□ -1.83
OTU1YFL044C THR1P17423 357 aaKnown RBP3.65□□□□□ -1.83
OTU1YFL044C MRPL9P31334 269 aa3.65□□□□□ -1.83
OTU1YFL044C NUP120P35729 1037 aa3.65□□□□□ -1.83
OTU1YFL044C CTP1P38152 299 aa3.65□□□□□ -1.83
OTU1YFL044C RKM3P38222 552 aa3.65□□□□□ -1.83
OTU1YFL044C UBA4P38820 440 aa3.65□□□□□ -1.83
OTU1YFL044C DHH1P39517 506 aaKnown RBP3.65□□□□□ -1.83
OTU1YFL044C SEO1P39709 593 aa3.65□□□□□ -1.83
OTU1YFL044C LCP5P40079 357 aaPredicted RBP3.65□□□□□ -1.83
OTU1YFL044C YIL086CP40503 102 aa3.65□□□□□ -1.83
OTU1YFL044C DJP1P40564 432 aa3.65□□□□□ -1.83
OTU1YFL044C TRM12Q04235 462 aa3.65□□□□□ -1.83
OTU1YFL044C YDR109CQ04585 715 aa3.65□□□□□ -1.83
OTU1YFL044C SOV1Q04748 898 aa3.65□□□□□ -1.83
OTU1YFL044C VTA1Q06263 330 aa3.65□□□□□ -1.83
OTU1YFL044C YPL272CQ08984 517 aa3.65□□□□□ -1.83
OTU1YFL044C YOL107WQ12239 342 aa3.65□□□□□ -1.83
OTU1YFL044C RMD5Q12508 421 aa3.65□□□□□ -1.83
OTU1YFL044C QCR6P00127 147 aa3.64□□□□□ -1.83
OTU1YFL044C GAL7P08431 366 aa3.64□□□□□ -1.83
OTU1YFL044C ILS1P09436 1072 aaKnown RBP3.64□□□□□ -1.83
OTU1YFL044C IMA3P0CW40 589 aa3.64□□□□□ -1.83
OTU1YFL044C IMA4P0CW41 589 aa3.64□□□□□ -1.83
OTU1YFL044C URA4P20051 364 aa3.64□□□□□ -1.83
OTU1YFL044C RAD57P25301 460 aa3.64□□□□□ -1.83
OTU1YFL044C NRP1P32770 719 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
OTU1YFL044C SEF1P34228 1148 aa3.64□□□□□ -1.83
OTU1YFL044C FMP46P36141 133 aaKnown RBP3.64□□□□□ -1.83
OTU1YFL044C MRP21P38175 177 aa3.64□□□□□ -1.83
OTU1YFL044C TCD1P38756 429 aa3.64□□□□□ -1.83
OTU1YFL044C YHR045WP38775 560 aa3.64□□□□□ -1.83
OTU1YFL044C YHR182WP38870 785 aa3.64□□□□□ -1.83
OTU1YFL044C PSD1P39006 500 aa3.64□□□□□ -1.83
OTU1YFL044C END3P39013 349 aa3.64□□□□□ -1.83
OTU1YFL044C ARB1P40024 610 aaKnown RBP3.64□□□□□ -1.83
OTU1YFL044C TPA1P40032 644 aaKnown RBP3.64□□□□□ -1.83
OTU1YFL044C LSM5P40089 93 aaKnown RBP3.64□□□□□ -1.83
OTU1YFL044C IKS1P47042 667 aa3.64□□□□□ -1.83
OTU1YFL044C PET130P47065 347 aa3.64□□□□□ -1.83
OTU1YFL044C COS12P53053 380 aa3.64□□□□□ -1.83
OTU1YFL044C NNF2P53253 936 aa3.64□□□□□ -1.83
OTU1YFL044C YGR250CP53316 781 aaKnown RBP3.64□□□□□ -1.83
OTU1YFL044C PET117Q02771 107 aa3.64□□□□□ -1.83
OTU1YFL044C DIG1Q03063 452 aaKnown RBP3.64□□□□□ -1.83
OTU1YFL044C MTG1Q03151 367 aaPredicted RBP3.64□□□□□ -1.83
OTU1YFL044C TAF11Q04226 346 aa3.64□□□□□ -1.83
OTU1YFL044C ARR3Q06598 404 aa3.64□□□□□ -1.83
OTU1YFL044C YDL086WQ07505 273 aa3.64□□□□□ -1.83
OTU1YFL044C FMP45Q07651 309 aa3.64□□□□□ -1.83
OTU1YFL044C AIM6Q07716 390 aa3.64□□□□□ -1.83
OTU1YFL044C IMA2Q08295 589 aa3.64□□□□□ -1.83
OTU1YFL044C YLR302CO13544 120 aa3.63□□□□□ -1.83
OTU1YFL044C PET122P10355 254 aa3.63□□□□□ -1.83
OTU1YFL044C VPS33P20795 691 aa3.63□□□□□ -1.83
OTU1YFL044C ADH7P25377 361 aa3.63□□□□□ -1.83
OTU1YFL044C CDC39P25655 2108 aaKnown RBP3.63□□□□□ -1.83
OTU1YFL044C BUB3P26449 341 aa3.63□□□□□ -1.83
OTU1YFL044C MSS1P32559 526 aaPredicted RBP3.63□□□□□ -1.83
OTU1YFL044C TIP20P33891 701 aa3.63□□□□□ -1.83
OTU1YFL044C SKT5P34226 696 aa3.63□□□□□ -1.83
OTU1YFL044C ELF1P36053 145 aa3.63□□□□□ -1.83
OTU1YFL044C FTH1P38310 465 aa3.63□□□□□ -1.83
OTU1YFL044C YBP1P38315 674 aa3.63□□□□□ -1.83
OTU1YFL044C MMS21P38632 267 aa3.63□□□□□ -1.83
OTU1YFL044C SMF2P38778 549 aa3.63□□□□□ -1.83
OTU1YFL044C YJL193WP39542 402 aa3.63□□□□□ -1.83
OTU1YFL044C YMR134WP40207 237 aa3.63□□□□□ -1.83
OTU1YFL044C EFM4P40516 257 aa3.63□□□□□ -1.83
OTU1YFL044C ELP2P42935 788 aa3.63□□□□□ -1.83
OTU1YFL044C IRC6P43615 237 aa3.63□□□□□ -1.83
OTU1YFL044C RPC17P47076 161 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 108.1 ms