RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W DDI1P40087 428 aa5.06□□□□□ -1.6
UBP9YER098W ELO3P40319 345 aa5.06□□□□□ -1.6
UBP9YER098W SAE2P46946 345 aa5.06□□□□□ -1.6
UBP9YER098W MDV1P47025 714 aa5.06□□□□□ -1.6
UBP9YER098W DID2P69771 204 aa5.06□□□□□ -1.6
UBP9YER098W RNY1Q02933 434 aaKnown RBP5.06□□□□□ -1.6
UBP9YER098W DYN3Q04949 312 aa5.06□□□□□ -1.6
UBP9YER098W FAR10Q06001 478 aa5.06□□□□□ -1.6
UBP9YER098W MED7Q08278 222 aa5.06□□□□□ -1.6
UBP9YER098W YPL272CQ08984 517 aa5.06□□□□□ -1.6
UBP9YER098W MET3P08536 511 aa5.05□□□□□ -1.6
UBP9YER098W PHO84P25297 587 aaKnown RBP5.05□□□□□ -1.6
UBP9YER098W FUB1P25659 250 aa5.05□□□□□ -1.6
UBP9YER098W DUG2P38149 878 aa5.05□□□□□ -1.6
UBP9YER098W CHS6P40955 746 aa5.05□□□□□ -1.6
UBP9YER098W RTT101P47050 842 aa5.05□□□□□ -1.6
UBP9YER098W APS3P47064 194 aa5.05□□□□□ -1.6
UBP9YER098W MRPL50P53724 139 aa5.05□□□□□ -1.6
UBP9YER098W YMR099CQ03161 297 aaKnown RBP5.05□□□□□ -1.6
UBP9YER098W YET3Q07451 203 aa5.05□□□□□ -1.6
UBP9YER098W FMP45Q07651 309 aa5.05□□□□□ -1.6
UBP9YER098W YLR031WQ07978 186 aa5.05□□□□□ -1.6
UBP9YER098W MLH3Q12083 715 aa5.05□□□□□ -1.6
UBP9YER098W YKL033W-AQ86ZR7 236 aa5.05□□□□□ -1.6
UBP9YER098W UBR1P19812 1950 aa5.05□□□□□ -1.6
UBP9YER098W ADE5,7P07244 802 aaKnown RBP5.04□□□□□ -1.6
UBP9YER098W CBS2P14905 389 aa5.04□□□□□ -1.6
UBP9YER098W EST1P17214 699 aaPredicted RBP5.04□□□□□ -1.6
UBP9YER098W DBP3P20447 523 aaKnown RBP5.04□□□□□ -1.6
UBP9YER098W CTR86P25355 563 aa5.04□□□□□ -1.6
UBP9YER098W YIH1P25637 258 aa5.04□□□□□ -1.6
UBP9YER098W URA7P28274 579 aaKnown RBP5.04□□□□□ -1.6
UBP9YER098W MEI5P32489 222 aa5.04□□□□□ -1.6
UBP9YER098W ARC19P33204 171 aaKnown RBP5.04□□□□□ -1.6
UBP9YER098W HIS7P33734 552 aaKnown RBP5.04□□□□□ -1.6
UBP9YER098W CST26P38226 397 aa5.04□□□□□ -1.6
UBP9YER098W POP4P38336 279 aa5.04□□□□□ -1.6
UBP9YER098W GOS1P38736 223 aa5.04□□□□□ -1.6
UBP9YER098W YHI9P38765 294 aa5.04□□□□□ -1.6
UBP9YER098W YHR097CP38809 366 aaKnown RBP5.04□□□□□ -1.6
UBP9YER098W ALD5P40047 520 aaKnown RBP5.04□□□□□ -1.6
UBP9YER098W SER3P40054 469 aa5.04□□□□□ -1.6
UBP9YER098W FET5P43561 622 aa5.04□□□□□ -1.6
UBP9YER098W FAR3P46671 204 aa5.04□□□□□ -1.6
UBP9YER098W OCA1P50946 238 aaPredicted RBP5.04□□□□□ -1.6
UBP9YER098W RPL22BP56628 122 aaKnown RBP5.04□□□□□ -1.6
UBP9YER098W HER2Q03557 464 aa5.04□□□□□ -1.6
UBP9YER098W EMI2Q04409 500 aaKnown RBP5.04□□□□□ -1.6
UBP9YER098W HEL2Q05580 639 aaKnown RBP5.04□□□□□ -1.6
UBP9YER098W YLR297WQ05899 129 aa5.04□□□□□ -1.6
UBP9YER098W MDM36Q06820 579 aa5.04□□□□□ -1.6
UBP9YER098W ENB1Q08299 606 aa5.04□□□□□ -1.6
UBP9YER098W AAD15Q08361 143 aa5.04□□□□□ -1.6
UBP9YER098W SLM3Q12093 417 aa5.04□□□□□ -1.6
UBP9YER098W FRE6Q12473 712 aa5.04□□□□□ -1.6
UBP9YER098W STF2P16965 84 aa5.04□□□□□ -1.6
UBP9YER098W MDH1P17505 334 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
UBP9YER098W TRX1P22217 103 aaKnown RBP5.04□□□□□ -1.6
UBP9YER098W PRO3P32263 286 aaKnown RBP5.04□□□□□ -1.6
UBP9YER098W SPR1P32603 445 aa5.04□□□□□ -1.6
UBP9YER098W IMP3P32899 183 aaPredicted RBP5.04□□□□□ -1.6
UBP9YER098W MYO3P36006 1272 aa5.04□□□□□ -1.6
UBP9YER098W RFS1P38234 210 aaKnown RBP5.04□□□□□ -1.6
UBP9YER098W CTK2P46962 323 aa5.04□□□□□ -1.6
UBP9YER098W CWC23P52868 283 aaPredicted RBP5.04□□□□□ -1.6
UBP9YER098W KTR5P53966 522 aaPredicted RBP5.04□□□□□ -1.6
UBP9YER098W RSC9Q03124 581 aa5.04□□□□□ -1.6
UBP9YER098W NNT1Q05874 261 aa5.04□□□□□ -1.6
UBP9YER098W CRN1Q06440 651 aa5.04□□□□□ -1.6
UBP9YER098W HER1Q12276 1246 aa5.04□□□□□ -1.6
UBP9YER098W PSY3Q12318 242 aa5.04□□□□□ -1.6
UBP9YER098W GTT2Q12390 233 aa5.04□□□□□ -1.6
UBP9YER098W AFI1Q99222 893 aa5.04□□□□□ -1.6
UBP9YER098W GAL80P04387 435 aa5.03□□□□□ -1.6
UBP9YER098W TRP4P07285 380 aaPredicted RBP5.03□□□□□ -1.6
UBP9YER098W DAP2P18962 818 aa5.03□□□□□ -1.6
UBP9YER098W CDC5P32562 705 aa5.03□□□□□ -1.6
UBP9YER098W CYS4P32582 507 aaKnown RBP5.03□□□□□ -1.6
UBP9YER098W ATP3P38077 311 aaKnown RBP5.03□□□□□ -1.6
UBP9YER098W YER186CP40101 306 aa5.03□□□□□ -1.6
UBP9YER098W YGR210CP42942 411 aa5.03□□□□□ -1.6
UBP9YER098W EFM3P47163 339 aa5.03□□□□□ -1.6
UBP9YER098W CTR1P49573 406 aa5.03□□□□□ -1.6
UBP9YER098W RPC11Q04307 110 aaPredicted RBP5.03□□□□□ -1.6
UBP9YER098W ROY1Q04847 553 aa5.03□□□□□ -1.6
UBP9YER098W MED2Q12124 431 aa5.03□□□□□ -1.6
UBP9YER098W USV1Q12132 391 aa5.03□□□□□ -1.6
UBP9YER098W TRM13Q12383 476 aa5.03□□□□□ -1.6
UBP9YER098W DSF1P0CX08 502 aa5.03□□□□□ -1.6
UBP9YER098W YNR073CP0CX09 502 aa5.03□□□□□ -1.6
UBP9YER098W RAP1P11938 827 aa5.03□□□□□ -1.6
UBP9YER098W SAR1P20606 190 aaKnown RBP5.03□□□□□ -1.6
UBP9YER098W DBF2P22204 572 aa5.03□□□□□ -1.6
UBP9YER098W SSE2P32590 693 aaKnown RBP5.03□□□□□ -1.6
UBP9YER098W YKL063CP35725 167 aa5.03□□□□□ -1.6
UBP9YER098W MRPL40P36534 297 aa5.03□□□□□ -1.6
UBP9YER098W AGP2P38090 596 aa5.03□□□□□ -1.6
UBP9YER098W POL12P38121 705 aaPredicted RBP5.03□□□□□ -1.6
UBP9YER098W YFH7P43591 353 aa5.03□□□□□ -1.6
UBP9YER098W YJL163CP46996 555 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms