RNA–Protein interactions for RNA: YER059W

PCL6, Transcript of Pho85p cyclin of the Pho80p subfamily, yeast

Gene PCL6, Length 1,263 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL6	YER059W	GEP3	Q08622	556 aa		4.95	□□□□□ -1.62
PCL6	YER059W	STF1	P01098	86 aa		4.94	□□□□□ -1.62
PCL6	YER059W	PHO91	P27514	894 aa		4.94	□□□□□ -1.62
PCL6	YER059W	CRM1	P30822	1084 aa	Known RBP	4.94	□□□□□ -1.62
PCL6	YER059W	TOA1	P32773	286 aa		4.94	□□□□□ -1.62
PCL6	YER059W	SIF2	P38262	535 aa		4.94	□□□□□ -1.62
PCL6	YER059W	LYS1	P38998	373 aa	RIP-Chip data	4.94	□□□□□ -1.62	not detected
PCL6	YER059W	GAT2	P40209	560 aa		4.94	□□□□□ -1.62
PCL6	YER059W	BRO1	P48582	844 aa		4.94	□□□□□ -1.62
PCL6	YER059W	YDR541C	Q03049	344 aa		4.94	□□□□□ -1.62
PCL6	YER059W	NDL1	Q06568	189 aa		4.94	□□□□□ -1.62
PCL6	YER059W	YFH1	Q07540	174 aa		4.94	□□□□□ -1.62
PCL6	YER059W	MUM3	Q08750	479 aa		4.94	□□□□□ -1.62
PCL6	YER059W	YCR043C	P25361	127 aa		4.93	□□□□□ -1.62
PCL6	YER059W	NDI1	P32340	513 aa		4.93	□□□□□ -1.62
PCL6	YER059W	NDC1	P32500	655 aa		4.93	□□□□□ -1.62
PCL6	YER059W	CYS4	P32582	507 aa	Known RBP	4.93	□□□□□ -1.62
PCL6	YER059W	UIP5	P36137	443 aa		4.93	□□□□□ -1.62
PCL6	YER059W	STN1	P38960	494 aa		4.93	□□□□□ -1.62
PCL6	YER059W	SHO1	P40073	367 aa		4.93	□□□□□ -1.62
PCL6	YER059W	TES1	P41903	349 aa	Known RBP	4.93	□□□□□ -1.62
PCL6	YER059W	SAD1	P43589	448 aa		4.93	□□□□□ -1.62
PCL6	YER059W	ROG1	P53118	685 aa		4.93	□□□□□ -1.62
PCL6	YER059W	ODC1	Q03028	310 aa		4.93	□□□□□ -1.62
PCL6	YER059W	SGT1	Q08446	395 aa		4.93	□□□□□ -1.62
PCL6	YER059W	CYB2	P00175	591 aa		4.92	□□□□□ -1.62
PCL6	YER059W	ARG4	P04076	463 aa	Predicted RBP	4.92	□□□□□ -1.62
PCL6	YER059W	CDC21	P06785	304 aa		4.92	□□□□□ -1.62
PCL6	YER059W	MTF1	P14908	341 aa	Known RBP	4.92	□□□□□ -1.62
PCL6	YER059W	RAD57	P25301	460 aa		4.92	□□□□□ -1.62
PCL6	YER059W	CTR86	P25355	563 aa		4.92	□□□□□ -1.62
PCL6	YER059W	NIP1	P32497	812 aa	Known RBP	4.92	□□□□□ -1.62
PCL6	YER059W	ADH5	P38113	351 aa	Known RBP	4.92	□□□□□ -1.62
PCL6	YER059W	YAL037W	P39728	267 aa		4.92	□□□□□ -1.62
PCL6	YER059W	FRE4	P53746	719 aa		4.92	□□□□□ -1.62
PCL6	YER059W	DBP9	Q06218	594 aa	Known RBP	4.92	□□□□□ -1.62
PCL6	YER059W	NSE1	Q07913	336 aa		4.92	□□□□□ -1.62
PCL6	YER059W	SRL1	Q08673	210 aa		4.92	□□□□□ -1.62
PCL6	YER059W	RGT2	Q12300	763 aa		4.92	□□□□□ -1.62
PCL6	YER059W	SRN2	Q99176	213 aa		4.92	□□□□□ -1.62
PCL6	YER059W	DAP2	P18962	818 aa		4.91	□□□□□ -1.62
PCL6	YER059W	KAP104	P38217	918 aa	Known RBP	4.91	□□□□□ -1.62
PCL6	YER059W	ALG8	P40351	577 aa		4.91	□□□□□ -1.62
PCL6	YER059W	YPS6	P40583	537 aa		4.91	□□□□□ -1.62
PCL6	YER059W	CHS6	P40955	746 aa		4.91	□□□□□ -1.62
PCL6	YER059W	FYV8	P46949	817 aa	Known RBP	4.91	□□□□□ -1.62
PCL6	YER059W	ASN2	P49090	572 aa	Known RBP	4.91	□□□□□ -1.62
PCL6	YER059W	SCS3	P53012	380 aa		4.91	□□□□□ -1.62
PCL6	YER059W	YIP5	P53108	310 aa		4.91	□□□□□ -1.62
PCL6	YER059W	GPI15	P53961	229 aa		4.91	□□□□□ -1.62
PCL6	YER059W	ORT1	Q12375	292 aa		4.91	□□□□□ -1.62
PCL6	YER059W	LSB5	P25369	354 aa		4.9	□□□□□ -1.63
PCL6	YER059W	SPC110	P32380	944 aa		4.9	□□□□□ -1.63
PCL6	YER059W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
PCL6	YER059W	INM1	P38710	295 aa		4.9	□□□□□ -1.63
PCL6	YER059W	GPI16	P38875	610 aa		4.9	□□□□□ -1.63
PCL6	YER059W	MNL1	P38888	796 aa		4.9	□□□□□ -1.63
PCL6	YER059W	HAT2	P39984	401 aa		4.9	□□□□□ -1.63
PCL6	YER059W	YND1	P40009	630 aa		4.9	□□□□□ -1.63
PCL6	YER059W	YER079W	P40052	210 aa	Known RBP	4.9	□□□□□ -1.63
PCL6	YER059W	SSN8	P47821	323 aa		4.9	□□□□□ -1.63
PCL6	YER059W	POP6	P53218	158 aa		4.9	□□□□□ -1.63
PCL6	YER059W	RPM2	Q02773	1202 aa		4.9	□□□□□ -1.63
PCL6	YER059W	RSN1	Q03516	953 aa		4.9	□□□□□ -1.63
PCL6	YER059W	BET5	Q03630	159 aa		4.9	□□□□□ -1.63
PCL6	YER059W	SKI7	Q08491	747 aa	Predicted RBP	4.9	□□□□□ -1.63
PCL6	YER059W	YPR022C	Q12139	1133 aa		4.9	□□□□□ -1.63
PCL6	YER059W	ATG34	Q12292	412 aa		4.9	□□□□□ -1.63
PCL6	YER059W	DST1	P07273	309 aa		4.89	□□□□□ -1.63
PCL6	YER059W	NFT1	P0CE68	1218 aa		4.89	□□□□□ -1.63
PCL6	YER059W	YCR022C	P25620	114 aa		4.89	□□□□□ -1.63
PCL6	YER059W	GLC7	P32598	312 aa	Known RBP	4.89	□□□□□ -1.63
PCL6	YER059W	YEL043W	P32618	956 aa		4.89	□□□□□ -1.63
PCL6	YER059W	RPS0A	P32905	252 aa	Known RBP	4.89	□□□□□ -1.63
PCL6	YER059W	YBR056W	P38081	501 aa		4.89	□□□□□ -1.63
PCL6	YER059W	RTT101	P47050	842 aa		4.89	□□□□□ -1.63
PCL6	YER059W	PHB2	P50085	310 aa		4.89	□□□□□ -1.63
PCL6	YER059W	AVT4	P50944	713 aa		4.89	□□□□□ -1.63
PCL6	YER059W	MMT1	Q03218	510 aa		4.89	□□□□□ -1.63
PCL6	YER059W	TIM18	Q08749	192 aa		4.89	□□□□□ -1.63
PCL6	YER059W	PKH2	Q12236	1081 aa	Known RBP	4.89	□□□□□ -1.63
PCL6	YER059W	NBL1	Q3E7Y6	73 aa		4.89	□□□□□ -1.63
PCL6	YER059W	TEF1	P02994	458 aa	Known RBP	4.88	□□□□□ -1.63
PCL6	YER059W	ILV5	P06168	395 aa	Known RBP	4.88	□□□□□ -1.63
PCL6	YER059W	CHS1	P08004	1131 aa		4.88	□□□□□ -1.63
PCL6	YER059W	UBA1	P22515	1024 aa	Known RBP	4.88	□□□□□ -1.63
PCL6	YER059W	TIP1	P27654	210 aa	Predicted RBP	4.88	□□□□□ -1.63
PCL6	YER059W	FAA1	P30624	700 aa	Known RBP	4.88	□□□□□ -1.63
PCL6	YER059W	QDR3	P38227	689 aa		4.88	□□□□□ -1.63
PCL6	YER059W	YIL089W	P40500	205 aa		4.88	□□□□□ -1.63
PCL6	YER059W	PAC11	P40960	533 aa		4.88	□□□□□ -1.63
PCL6	YER059W	CUE3	P53137	624 aa	Known RBP	4.88	□□□□□ -1.63
PCL6	YER059W	YNR048W	P53740	393 aa		4.88	□□□□□ -1.63
PCL6	YER059W	AQR1	P53943	586 aa		4.88	□□□□□ -1.63
PCL6	YER059W	MRP51	Q02950	344 aa		4.88	□□□□□ -1.63
PCL6	YER059W	PIR3	Q03180	325 aa		4.88	□□□□□ -1.63
PCL6	YER059W	URH1	Q04179	340 aa		4.88	□□□□□ -1.63
PCL6	YER059W	IPK1	Q06667	281 aa		4.88	□□□□□ -1.63
PCL6	YER059W	YPL199C	Q08954	240 aa		4.88	□□□□□ -1.63
PCL6	YER059W	IMA3	P0CW40	589 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms