RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	ALG7	P07286	448 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	ARO3	P14843	370 aa	Known RBP	4.82	□□□□□ -1.64
PAL1	YDR348C	PRI2	P20457	528 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	YCK1	P23291	538 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	CWH43	P25618	953 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	YBL010C	P32788	280 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	FRE2	P36033	711 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	YKL077W	P36081	392 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	YKR051W	P36142	418 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	RIB1	P38066	345 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	MAK5	P38112	773 aa	Predicted RBP	4.82	□□□□□ -1.64
PAL1	YDR348C	YBL028C	P38202	106 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	PPE1	P38796	400 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	YHR202W	P38887	602 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	GEM1	P39722	662 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	EMP65	P40085	556 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	GID8	P40208	455 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	ARF3	P40994	183 aa	RIP-Chip data	4.82	□□□□□ -1.64	not detected
PAL1	YDR348C	ECM27	P47144	725 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	SRB7	P47822	140 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	SPT20	P50875	604 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	ALT2	P52892	507 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	JAC1	P53193	184 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	YGR026W	P53217	278 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	GTF1	P53260	183 aa	Predicted RBP	4.82	□□□□□ -1.64
PAL1	YDR348C	GTR2	P53290	341 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	SLI1	P53304	468 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	YGR283C	P53336	341 aa	Predicted RBP	4.82	□□□□□ -1.64
PAL1	YDR348C	MTD1	Q02046	320 aa	Known RBP	4.82	□□□□□ -1.64
PAL1	YDR348C	YMR279C	Q03263	540 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	SIZ1	Q04195	904 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	CRR1	Q05790	422 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	YLR224W	Q05947	369 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	HDA2	Q06629	674 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	FMP25	Q08023	583 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	LYS21	Q12122	440 aa	Known RBP	4.82	□□□□□ -1.64
PAL1	YDR348C	YPR022C	Q12139	1133 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	MDY2	Q12285	212 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	YLR126C	Q12288	251 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	YOR012W	Q12351	137 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	WTM1	Q12363	437 aa	Known RBP	4.82	□□□□□ -1.64
PAL1	YDR348C	YGL194C-A	Q2V2P6	80 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	YOR019W	Q99248	730 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	CMP2	P14747	604 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	RPA135	P22138	1203 aa	Known RBP	4.82	□□□□□ -1.64
PAL1	YDR348C	SGF29	P25554	259 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	DPH2	P32461	534 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	SDS22	P36047	338 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	MBA1	P38300	278 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	NMD3	P38861	518 aa	Known RBP	4.82	□□□□□ -1.64
PAL1	YDR348C	AIM18	P38884	321 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	RCY1	P39531	840 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	PYK2	P52489	506 aa	Known RBP	4.82	□□□□□ -1.64
PAL1	YDR348C	YNL146W	P53906	100 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	YNL018C	P53976	612 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	ARP4	P80428	489 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	MRPS16	Q02608	121 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	YDR541C	Q03049	344 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	YDR131C	Q03899	556 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	SNX41	Q04053	625 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	SPO20	Q04359	397 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	HEL2	Q05580	639 aa	Known RBP	4.82	□□□□□ -1.64
PAL1	YDR348C	YLR455W	Q06188	304 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	MRL1	Q06815	381 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	SKI7	Q08491	747 aa	Predicted RBP	4.82	□□□□□ -1.64
PAL1	YDR348C	YPL199C	Q08954	240 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	UBX3	Q12229	455 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	DGK1	Q12382	290 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	PNS1	Q12412	539 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	SKM1	Q12469	655 aa		4.82	□□□□□ -1.64
PAL1	YDR348C	MAS1	P10507	462 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	YPK1	P12688	680 aa	Known RBP	4.81	□□□□□ -1.64
PAL1	YDR348C	CDC34	P14682	295 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	YKU70	P32807	602 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	ARC19	P33204	171 aa	Known RBP	4.81	□□□□□ -1.64
PAL1	YDR348C	ABZ1	P37254	787 aa	Predicted RBP	4.81	□□□□□ -1.64
PAL1	YDR348C	PHO88	P38264	188 aa	Predicted RBP	4.81	□□□□□ -1.64
PAL1	YDR348C	FTH1	P38310	465 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	SRP68	P38687	599 aa	Known RBP	4.81	□□□□□ -1.64
PAL1	YDR348C	RRF1	P38771	230 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	ERV46	P39727	415 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	PTI1	P39927	425 aa	Predicted RBP	4.81	□□□□□ -1.64
PAL1	YDR348C	VAC8	P39968	578 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	FMP52	P40008	231 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	RGI1	P40043	161 aa	Predicted RBP	4.81	□□□□□ -1.64
PAL1	YDR348C	DOT6	P40059	670 aa	Known RBP	4.81	□□□□□ -1.64
PAL1	YDR348C	YJL218W	P40892	196 aa	Known RBP	4.81	□□□□□ -1.64
PAL1	YDR348C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
PAL1	YDR348C	LSM8	P47093	109 aa	Known RBP	4.81	□□□□□ -1.64
PAL1	YDR348C	FAA4	P47912	694 aa	Known RBP	4.81	□□□□□ -1.64
PAL1	YDR348C	NCS6	P53088	359 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	MKC7	P53379	596 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	RVB1	Q03940	463 aa	Known RBP	4.81	□□□□□ -1.64
PAL1	YDR348C	YLR283W	Q05867	314 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	ARV1	Q06541	321 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	UBX5	Q06682	500 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	SHS1	Q07657	551 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	RRG7	Q08774	242 aa	Predicted RBP	4.81	□□□□□ -1.64
PAL1	YDR348C	YLR049C	Q12110	428 aa		4.81	□□□□□ -1.64
PAL1	YDR348C	LCB4	Q12246	624 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms