RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	HNT3	Q08702	217 aa		4.25	□□□□□ -1.73
NSE3	YDR288W	BUG1	Q12191	341 aa		4.25	□□□□□ -1.73
NSE3	YDR288W	GPM3	Q12326	303 aa		4.25	□□□□□ -1.73
NSE3	YDR288W	MTR10	Q99189	972 aa		4.25	□□□□□ -1.73
NSE3	YDR288W	TEF1	P02994	458 aa	Known RBP	4.24	□□□□□ -1.73
NSE3	YDR288W	SMY1	P32364	656 aa	Known RBP	4.24	□□□□□ -1.73
NSE3	YDR288W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
NSE3	YDR288W	IBD2	P53892	351 aa		4.24	□□□□□ -1.73
NSE3	YDR288W	VPS9	P54787	451 aa		4.24	□□□□□ -1.73
NSE3	YDR288W	YTH1	Q06102	208 aa	Predicted RBP	4.24	□□□□□ -1.73
NSE3	YDR288W	LSB5	P25369	354 aa		4.23	□□□□□ -1.73
NSE3	YDR288W	SPS22	P25380	463 aa		4.23	□□□□□ -1.73
NSE3	YDR288W	CPR3	P25719	182 aa		4.23	□□□□□ -1.73
NSE3	YDR288W	MST28	P39552	234 aa		4.23	□□□□□ -1.73
NSE3	YDR288W	PHO86	P46956	311 aa		4.23	□□□□□ -1.73
NSE3	YDR288W	YJL055W	P47044	245 aa		4.23	□□□□□ -1.73
NSE3	YDR288W	PHB2	P50085	310 aa		4.23	□□□□□ -1.73
NSE3	YDR288W	YNR048W	P53740	393 aa		4.23	□□□□□ -1.73
NSE3	YDR288W	THP3	Q12049	470 aa	Known RBP	4.23	□□□□□ -1.73
NSE3	YDR288W	ORT1	Q12375	292 aa		4.23	□□□□□ -1.73
NSE3	YDR288W	YCL021W-A	Q96VH3	125 aa		4.23	□□□□□ -1.73
NSE3	YDR288W	HEM15	P16622	393 aa		4.22	□□□□□ -1.73
NSE3	YDR288W	MNE1	P24720	663 aa		4.22	□□□□□ -1.73
NSE3	YDR288W	RRP4	P38792	359 aa	Known RBP	4.22	□□□□□ -1.73
NSE3	YDR288W	YHR218W	P38899	603 aa		4.22	□□□□□ -1.73
NSE3	YDR288W	SER3	P40054	469 aa		4.22	□□□□□ -1.73
NSE3	YDR288W	OST1	P41543	476 aa	Known RBP	4.22	□□□□□ -1.73
NSE3	YDR288W	WWM1	P43582	211 aa	Known RBP	4.22	□□□□□ -1.73
NSE3	YDR288W	OAZ1	Q02803	292 aa		4.22	□□□□□ -1.73
NSE3	YDR288W	RSN1	Q03516	953 aa		4.22	□□□□□ -1.73
NSE3	YDR288W	TAF12	Q03761	539 aa		4.22	□□□□□ -1.73
NSE3	YDR288W	YLR108C	Q12259	485 aa		4.22	□□□□□ -1.73
NSE3	YDR288W	PDE2	P06776	526 aa		4.21	□□□□□ -1.74
NSE3	YDR288W	CHS1	P08004	1131 aa		4.21	□□□□□ -1.74
NSE3	YDR288W	PMR1	P13586	950 aa		4.21	□□□□□ -1.74
NSE3	YDR288W	SLY1	P22213	666 aa		4.21	□□□□□ -1.74
NSE3	YDR288W	RNA14	P25298	677 aa	Known RBP	4.21	□□□□□ -1.74
NSE3	YDR288W	GEX1	P25596	615 aa		4.21	□□□□□ -1.74
NSE3	YDR288W	LTV1	P34078	463 aa		4.21	□□□□□ -1.74
NSE3	YDR288W	LCB2	P40970	561 aa		4.21	□□□□□ -1.74
NSE3	YDR288W	IMP4	P53941	290 aa	Known RBP	4.21	□□□□□ -1.74
NSE3	YDR288W	RRN11	Q04712	507 aa		4.21	□□□□□ -1.74
NSE3	YDR288W	SKI7	Q08491	747 aa	Predicted RBP	4.21	□□□□□ -1.74
NSE3	YDR288W	RAD61	Q99359	647 aa		4.21	□□□□□ -1.74
NSE3	YDR288W	CTR86	P25355	563 aa		4.2	□□□□□ -1.74
NSE3	YDR288W	RIM1	P32445	135 aa	Known RBP	4.2	□□□□□ -1.74
NSE3	YDR288W	SWH1	P35845	1188 aa		4.2	□□□□□ -1.74
NSE3	YDR288W	KKQ8	P36004	724 aa		4.2	□□□□□ -1.74
NSE3	YDR288W	YBR056W	P38081	501 aa		4.2	□□□□□ -1.74
NSE3	YDR288W	ZTA1	P38230	334 aa	Known RBP	4.2	□□□□□ -1.74
NSE3	YDR288W	TIF5	P38431	405 aa	Known RBP	4.2	□□□□□ -1.74
NSE3	YDR288W	LRP1	P38801	184 aa	Known RBP	4.2	□□□□□ -1.74
NSE3	YDR288W	PCF11	P39081	626 aa	Predicted RBP	4.2	□□□□□ -1.74
NSE3	YDR288W	YAL037W	P39728	267 aa		4.2	□□□□□ -1.74
NSE3	YDR288W	GDI1	P39958	451 aa	Known RBP	4.2	□□□□□ -1.74
NSE3	YDR288W	VHS2	P40463	436 aa		4.2	□□□□□ -1.74
NSE3	YDR288W	PIB2	P53191	635 aa		4.2	□□□□□ -1.74
NSE3	YDR288W	GPI15	P53961	229 aa		4.2	□□□□□ -1.74
NSE3	YDR288W	YMR181C	Q03231	154 aa		4.2	□□□□□ -1.74
NSE3	YDR288W	ESA1	Q08649	445 aa		4.2	□□□□□ -1.74
NSE3	YDR288W	RRP12	Q12754	1228 aa	Known RBP	4.2	□□□□□ -1.74
NSE3	YDR288W	ADE4	P04046	510 aa	Known RBP	4.19	□□□□□ -1.74
NSE3	YDR288W	ASC1	P38011	319 aa	Known RBP	4.19	□□□□□ -1.74
NSE3	YDR288W	MIX23	P38162	196 aa		4.19	□□□□□ -1.74
NSE3	YDR288W	OLA1	P38219	394 aa	Known RBP	4.19	□□□□□ -1.74
NSE3	YDR288W	MTC6	P38849	526 aa		4.19	□□□□□ -1.74
NSE3	YDR288W	FAD1	P38913	306 aa		4.19	□□□□□ -1.74
NSE3	YDR288W	NCA3	P46955	337 aa		4.19	□□□□□ -1.74
NSE3	YDR288W	SMA2	Q04658	369 aa		4.19	□□□□□ -1.74
NSE3	YDR288W	SNX3	Q08826	162 aa	Known RBP	4.19	□□□□□ -1.74
NSE3	YDR288W	SPE3	Q12074	293 aa	Known RBP	4.19	□□□□□ -1.74
NSE3	YDR288W	ILV5	P06168	395 aa	Known RBP	4.18	□□□□□ -1.74
NSE3	YDR288W	RAD57	P25301	460 aa		4.18	□□□□□ -1.74
NSE3	YDR288W	ITR1	P30605	584 aa		4.18	□□□□□ -1.74
NSE3	YDR288W	HEL1	P36113	551 aa		4.18	□□□□□ -1.74
NSE3	YDR288W	NDT80	P38830	627 aa		4.18	□□□□□ -1.74
NSE3	YDR288W	FAA2	P39518	744 aa		4.18	□□□□□ -1.74
NSE3	YDR288W	YIL067C	P40514	678 aa		4.18	□□□□□ -1.74
NSE3	YDR288W	MDG1	P53885	366 aa		4.18	□□□□□ -1.74
NSE3	YDR288W	ERO1	Q03103	563 aa		4.18	□□□□□ -1.74
NSE3	YDR288W	PPM1	Q04081	328 aa		4.18	□□□□□ -1.74
NSE3	YDR288W	PAR32	Q12515	295 aa	Known RBP	4.18	□□□□□ -1.74
NSE3	YDR288W	HHF1	P02309	103 aa	Known RBP	4.17	□□□□□ -1.74
NSE3	YDR288W	ARO3	P14843	370 aa	Known RBP	4.17	□□□□□ -1.74
NSE3	YDR288W	CBS2	P14905	389 aa		4.17	□□□□□ -1.74
NSE3	YDR288W	CPR4	P25334	318 aa		4.17	□□□□□ -1.74
NSE3	YDR288W	DEG1	P31115	442 aa	Known RBP	4.17	□□□□□ -1.74
NSE3	YDR288W	CYS4	P32582	507 aa	Known RBP	4.17	□□□□□ -1.74
NSE3	YDR288W	MDL1	P33310	695 aa		4.17	□□□□□ -1.74
NSE3	YDR288W	YBL059W	P34224	193 aa		4.17	□□□□□ -1.74
NSE3	YDR288W	TOM22	P49334	152 aa		4.17	□□□□□ -1.74
NSE3	YDR288W	YLR456W	Q06199	204 aa		4.17	□□□□□ -1.74
NSE3	YDR288W	UAF30	Q08747	228 aa		4.17	□□□□□ -1.74
NSE3	YDR288W	RMD5	Q12508	421 aa		4.17	□□□□□ -1.74
NSE3	YDR288W	MUD1	P32605	298 aa	Known RBP	4.16	□□□□□ -1.74
NSE3	YDR288W	SDH3	P33421	198 aa		4.16	□□□□□ -1.74
NSE3	YDR288W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
NSE3	YDR288W	YER079W	P40052	210 aa	Known RBP	4.16	□□□□□ -1.74
NSE3	YDR288W	JEM1	P40358	645 aa		4.16	□□□□□ -1.74
NSE3	YDR288W	AZR1	P50080	613 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms