RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W LNP1P38878 278 aa5.34□□□□□ -1.56
FOB1YDR110W SSN3P39073 555 aa5.34□□□□□ -1.56
FOB1YDR110W HXT9P40885 567 aa5.34□□□□□ -1.56
FOB1YDR110W IME4P41833 600 aa5.34□□□□□ -1.56
FOB1YDR110W YAR1P46683 200 aa5.34□□□□□ -1.56
FOB1YDR110W STB4P50104 949 aa5.34□□□□□ -1.56
FOB1YDR110W EXG2P52911 562 aa5.34□□□□□ -1.56
FOB1YDR110W NOP19P53317 196 aaPredicted RBP5.34□□□□□ -1.56
FOB1YDR110W YIP3P53633 176 aa5.34□□□□□ -1.56
FOB1YDR110W RCF2P53721 224 aa5.34□□□□□ -1.56
FOB1YDR110W IPI3P53877 555 aa5.34□□□□□ -1.56
FOB1YDR110W HXT11P54862 567 aa5.34□□□□□ -1.56
FOB1YDR110W CTF19Q02732 369 aa5.34□□□□□ -1.56
FOB1YDR110W TRS31Q03337 283 aa5.34□□□□□ -1.56
FOB1YDR110W PEX12Q04370 399 aa5.34□□□□□ -1.56
FOB1YDR110W YPD1Q07688 167 aa5.34□□□□□ -1.56
FOB1YDR110W AIM6Q07716 390 aa5.34□□□□□ -1.56
FOB1YDR110W MUM3Q08750 479 aa5.34□□□□□ -1.56
FOB1YDR110W PAA1Q12447 191 aaKnown RBP5.34□□□□□ -1.56
FOB1YDR110W ILV2P07342 687 aaKnown RBP5.33□□□□□ -1.56
FOB1YDR110W PRP4P20053 465 aaKnown RBP5.33□□□□□ -1.56
FOB1YDR110W PTC6P25646 442 aa5.33□□□□□ -1.56
FOB1YDR110W PRR1P28708 518 aa5.33□□□□□ -1.56
FOB1YDR110W FRE1P32791 686 aa5.33□□□□□ -1.56
FOB1YDR110W UTP11P34247 250 aaPredicted RBP5.33□□□□□ -1.56
FOB1YDR110W SSH1P38353 490 aaKnown RBP5.33□□□□□ -1.56
FOB1YDR110W PFS1P38872 237 aa5.33□□□□□ -1.56
FOB1YDR110W UTP25P40498 721 aaKnown RBP5.33□□□□□ -1.56
FOB1YDR110W LSB6P42951 607 aa5.33□□□□□ -1.56
FOB1YDR110W IMD4P50094 524 aaKnown RBP5.33□□□□□ -1.56
FOB1YDR110W MTC3P53077 123 aa5.33□□□□□ -1.56
FOB1YDR110W BUD9P53226 547 aa5.33□□□□□ -1.56
FOB1YDR110W TRM112P53738 135 aaPredicted RBP5.33□□□□□ -1.56
FOB1YDR110W BIO5P53744 561 aaKnown RBP5.33□□□□□ -1.56
FOB1YDR110W YNR065CP53751 1116 aa5.33□□□□□ -1.56
FOB1YDR110W SKO1Q02100 647 aa5.33□□□□□ -1.56
FOB1YDR110W YMR130WQ04223 302 aa5.33□□□□□ -1.56
FOB1YDR110W FAR8Q05040 523 aa5.33□□□□□ -1.56
FOB1YDR110W YPR078CQ06813 372 aa5.33□□□□□ -1.56
FOB1YDR110W PAM18Q07914 168 aa5.33□□□□□ -1.56
FOB1YDR110W ACM1Q08981 209 aa5.33□□□□□ -1.56
FOB1YDR110W YOR289WQ12012 251 aaPredicted RBP5.33□□□□□ -1.56
FOB1YDR110W COX2P00410 251 aa5.32□□□□□ -1.56
FOB1YDR110W SAR1P20606 190 aaKnown RBP5.32□□□□□ -1.56
FOB1YDR110W YIH1P25637 258 aa5.32□□□□□ -1.56
FOB1YDR110W YPS1P32329 569 aa5.32□□□□□ -1.56
FOB1YDR110W PAD1P33751 242 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
FOB1YDR110W SNU114P36048 1008 aaKnown RBP5.32□□□□□ -1.56
FOB1YDR110W YBR259WP38338 688 aa5.32□□□□□ -1.56
FOB1YDR110W YER184CP39961 794 aa5.32□□□□□ -1.56
FOB1YDR110W JLP2P40206 208 aa5.32□□□□□ -1.56
FOB1YDR110W QRI1P43123 477 aaKnown RBP5.32□□□□□ -1.56
FOB1YDR110W TAH11P47112 604 aa5.32□□□□□ -1.56
FOB1YDR110W RAI1P53063 387 aaKnown RBP5.32□□□□□ -1.56
FOB1YDR110W YGR042WP53227 271 aa5.32□□□□□ -1.56
FOB1YDR110W YNL260CP53846 198 aa5.32□□□□□ -1.56
FOB1YDR110W USA1Q03714 838 aa5.32□□□□□ -1.56
FOB1YDR110W YDR248CQ03786 193 aa5.32□□□□□ -1.56
FOB1YDR110W GIS1Q03833 894 aa5.32□□□□□ -1.56
FOB1YDR110W VPS64Q03944 604 aa5.32□□□□□ -1.56
FOB1YDR110W YOR365CQ08844 703 aa5.32□□□□□ -1.56
FOB1YDR110W YDL176WQ12027 708 aa5.32□□□□□ -1.56
FOB1YDR110W BAG7Q12128 409 aa5.32□□□□□ -1.56
FOB1YDR110W YLR108CQ12259 485 aa5.32□□□□□ -1.56
FOB1YDR110W ERG27Q12452 347 aaKnown RBP5.32□□□□□ -1.56
FOB1YDR110W DFG16Q99234 619 aa5.32□□□□□ -1.56
FOB1YDR110W RAV1P47104 1357 aa5.32□□□□□ -1.56
FOB1YDR110W PRC1P00729 532 aa5.31□□□□□ -1.56
FOB1YDR110W GPM1P00950 247 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W ATP1P07251 545 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W SPE1P08432 466 aa5.31□□□□□ -1.56
FOB1YDR110W KRE2P27809 442 aa5.31□□□□□ -1.56
FOB1YDR110W RRP1P35178 278 aaPredicted RBP5.31□□□□□ -1.56
FOB1YDR110W YKL063CP35725 167 aa5.31□□□□□ -1.56
FOB1YDR110W DUG2P38149 878 aa5.31□□□□□ -1.56
FOB1YDR110W MMS21P38632 267 aa5.31□□□□□ -1.56
FOB1YDR110W CCT2P39076 527 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W UBP9P39967 754 aa5.31□□□□□ -1.56
FOB1YDR110W DLD3P39976 496 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W VFA1P40080 203 aa5.31□□□□□ -1.56
FOB1YDR110W SEC24P40482 926 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W TED1P40533 473 aa5.31□□□□□ -1.56
FOB1YDR110W CIN5P40917 295 aa5.31□□□□□ -1.56
FOB1YDR110W YJR154WP47181 346 aa5.31□□□□□ -1.56
FOB1YDR110W RPS7BP48164 190 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W BOP3P53958 396 aa5.31□□□□□ -1.56
FOB1YDR110W PRP38Q00723 242 aaPredicted RBP5.31□□□□□ -1.56
FOB1YDR110W RMI1Q02685 241 aa5.31□□□□□ -1.56
FOB1YDR110W ARO80Q04052 950 aa5.31□□□□□ -1.56
FOB1YDR110W YML082WQ04533 649 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W RPN8Q08723 338 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W YPL260WQ08977 551 aa5.31□□□□□ -1.56
FOB1YDR110W NCR1Q12200 1170 aa5.31□□□□□ -1.56
FOB1YDR110W KRE5P22023 1365 aa5.31□□□□□ -1.56
FOB1YDR110W YPT1P01123 206 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W FRS1P15624 595 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W FRS2P15625 503 aaKnown RBP5.31□□□□□ -1.56
FOB1YDR110W SSO1P32867 290 aa5.31□□□□□ -1.56
FOB1YDR110W TAF14P35189 244 aa5.31□□□□□ -1.56
FOB1YDR110W SRP102P36057 244 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms