RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W PRP8P33334 2413 aaKnown RBP2.45□□□□□ -2.02
VPS41YDR080W TEF1P02994 458 aaKnown RBP2.45□□□□□ -2.02
VPS41YDR080W PHO2P07269 559 aa2.45□□□□□ -2.02
VPS41YDR080W BCY1P07278 416 aaKnown RBP2.45□□□□□ -2.02
VPS41YDR080W YBR062CP38239 180 aa2.45□□□□□ -2.02
VPS41YDR080W GND1P38720 489 aaKnown RBP2.45□□□□□ -2.02
VPS41YDR080W YLF2P38746 405 aa2.45□□□□□ -2.02
VPS41YDR080W MNT3P40549 630 aa2.45□□□□□ -2.02
VPS41YDR080W RRT5P43607 289 aa2.45□□□□□ -2.02
VPS41YDR080W ROK1P45818 564 aaPredicted RBP2.45□□□□□ -2.02
VPS41YDR080W LYS20P48570 428 aaKnown RBP2.45□□□□□ -2.02
VPS41YDR080W COG2P53271 262 aa2.45□□□□□ -2.02
VPS41YDR080W YPR003CP53394 754 aa2.45□□□□□ -2.02
VPS41YDR080W EFM6P53970 246 aa2.45□□□□□ -2.02
VPS41YDR080W CDC14Q00684 551 aa2.45□□□□□ -2.02
VPS41YDR080W MDM30Q05930 598 aa2.45□□□□□ -2.02
VPS41YDR080W YOR012WQ12351 137 aa2.45□□□□□ -2.02
VPS41YDR080W YER175W-AQ8TGU4 54 aa2.45□□□□□ -2.02
VPS41YDR080W GAL7P08431 366 aa2.44□□□□□ -2.02
VPS41YDR080W RED1P14291 827 aa2.44□□□□□ -2.02
VPS41YDR080W AIM17P23180 465 aaKnown RBP2.44□□□□□ -2.02
VPS41YDR080W COQ3P27680 312 aa2.44□□□□□ -2.02
VPS41YDR080W SAC6P32599 642 aaKnown RBP2.44□□□□□ -2.02
VPS41YDR080W ATO2P32907 282 aa2.44□□□□□ -2.02
VPS41YDR080W IME4P41833 600 aa2.44□□□□□ -2.02
VPS41YDR080W IDS2P46958 469 aa2.44□□□□□ -2.02
VPS41YDR080W EAF7P53911 425 aaKnown RBP2.44□□□□□ -2.02
VPS41YDR080W YPL071CQ02864 156 aa2.44□□□□□ -2.02
VPS41YDR080W EBS1Q03466 884 aaKnown RBP2.44□□□□□ -2.02
VPS41YDR080W ORM2Q06144 216 aa2.44□□□□□ -2.02
VPS41YDR080W RAX1Q08760 435 aa2.44□□□□□ -2.02
VPS41YDR080W NEW1Q08972 1196 aaKnown RBP2.44□□□□□ -2.02
VPS41YDR080W TRM8Q12009 286 aa2.44□□□□□ -2.02
VPS41YDR080W SEY1Q99287 776 aa2.44□□□□□ -2.02
VPS41YDR080W NIP1P32497 812 aaKnown RBP2.44□□□□□ -2.02
VPS41YDR080W MPE1P35728 441 aaKnown RBP2.44□□□□□ -2.02
VPS41YDR080W YPT52P36018 234 aaKnown RBP2.44□□□□□ -2.02
VPS41YDR080W YSW1P38280 609 aa2.44□□□□□ -2.02
VPS41YDR080W FLO5P38894 1075 aa2.44□□□□□ -2.02
VPS41YDR080W VPS41P38959 992 aa2.44□□□□□ -2.02
VPS41YDR080W ELP2P42935 788 aa2.44□□□□□ -2.02
VPS41YDR080W YDL218WQ07629 317 aa2.44□□□□□ -2.02
VPS41YDR080W TEN1Q07921 160 aa2.44□□□□□ -2.02
VPS41YDR080W AIM44Q99299 758 aa2.44□□□□□ -2.02
VPS41YDR080W PCT1P13259 424 aa2.43□□□□□ -2.02
VPS41YDR080W CLN1P20437 546 aa2.43□□□□□ -2.02
VPS41YDR080W YSP3P25036 478 aa2.43□□□□□ -2.02
VPS41YDR080W DCC1P25559 380 aa2.43□□□□□ -2.02
VPS41YDR080W BUB3P26449 341 aa2.43□□□□□ -2.02
VPS41YDR080W ADE17P38009 592 aaKnown RBP2.43□□□□□ -2.02
VPS41YDR080W YIR014WP40570 242 aa2.43□□□□□ -2.02
VPS41YDR080W ALK1P43633 760 aaKnown RBP2.43□□□□□ -2.02
VPS41YDR080W LCL3P53153 274 aa2.43□□□□□ -2.02
VPS41YDR080W HST1P53685 503 aa2.43□□□□□ -2.02
VPS41YDR080W TRM12Q04235 462 aa2.43□□□□□ -2.02
VPS41YDR080W YDR109CQ04585 715 aa2.43□□□□□ -2.02
VPS41YDR080W RCO1Q04779 684 aa2.43□□□□□ -2.02
VPS41YDR080W RRP45Q05636 305 aaKnown RBP2.43□□□□□ -2.02
VPS41YDR080W AKR2Q12013 749 aa2.43□□□□□ -2.02
VPS41YDR080W CSF1Q12150 2958 aa2.43□□□□□ -2.02
VPS41YDR080W COX5AP00424 153 aa2.43□□□□□ -2.02
VPS41YDR080W MSS18P08593 268 aa2.43□□□□□ -2.02
VPS41YDR080W CPR3P25719 182 aa2.43□□□□□ -2.02
VPS41YDR080W FMP46P36141 133 aaKnown RBP2.43□□□□□ -2.02
VPS41YDR080W TRM7P38238 310 aaKnown RBP2.43□□□□□ -2.02
VPS41YDR080W VBA2P38358 474 aaKnown RBP2.43□□□□□ -2.02
VPS41YDR080W AXL2P38928 823 aa2.43□□□□□ -2.02
VPS41YDR080W LYS1P38998 373 aaRIP-Chip data2.43□□□□□ -2.02not detected
VPS41YDR080W MEP1P40260 492 aa2.43□□□□□ -2.02
VPS41YDR080W ASN2P49090 572 aaKnown RBP2.43□□□□□ -2.02
VPS41YDR080W OCA1P50946 238 aaPredicted RBP2.43□□□□□ -2.02
VPS41YDR080W ARE2P53629 642 aaKnown RBP2.43□□□□□ -2.02
VPS41YDR080W ARP9Q05123 467 aa2.43□□□□□ -2.02
VPS41YDR080W YOL114CQ12322 202 aa2.43□□□□□ -2.02
VPS41YDR080W POL2P21951 2222 aaKnown RBP2.43□□□□□ -2.02
VPS41YDR080W PMT2P31382 759 aa2.43□□□□□ -2.02
VPS41YDR080W GYP6P32806 458 aa2.43□□□□□ -2.02
VPS41YDR080W NIP100P33420 868 aa2.43□□□□□ -2.02
VPS41YDR080W RPF2P36160 344 aaKnown RBP2.43□□□□□ -2.02
VPS41YDR080W YHR045WP38775 560 aa2.43□□□□□ -2.02
VPS41YDR080W GIM4P40005 111 aaKnown RBP2.43□□□□□ -2.02
VPS41YDR080W VMA13P41807 478 aaKnown RBP2.43□□□□□ -2.02
VPS41YDR080W YET2Q04210 160 aa2.43□□□□□ -2.02
VPS41YDR080W IVY1Q04934 453 aa2.43□□□□□ -2.02
VPS41YDR080W YOR342CQ12182 319 aa2.43□□□□□ -2.02
VPS41YDR080W ILS1P09436 1072 aaKnown RBP2.42□□□□□ -2.02
VPS41YDR080W RBK1P25332 333 aa2.42□□□□□ -2.02
VPS41YDR080W MRS6P32864 603 aaKnown RBP2.42□□□□□ -2.02
VPS41YDR080W IMP3P32899 183 aaPredicted RBP2.42□□□□□ -2.02
VPS41YDR080W SKT5P34226 696 aa2.42□□□□□ -2.02
VPS41YDR080W YIL152WP40455 235 aa2.42□□□□□ -2.02
VPS41YDR080W PET130P47065 347 aa2.42□□□□□ -2.02
VPS41YDR080W TRF5P48561 642 aaKnown RBP2.42□□□□□ -2.02
VPS41YDR080W BSC5P53755 489 aa2.42□□□□□ -2.02
VPS41YDR080W RLI1Q03195 608 aaKnown RBP2.42□□□□□ -2.02
VPS41YDR080W ATG16Q03818 150 aa2.42□□□□□ -2.02
VPS41YDR080W YPL191CQ08930 360 aa2.42□□□□□ -2.02
VPS41YDR080W TRA1P38811 3744 aa2.42□□□□□ -2.02
VPS41YDR080W CDC37P06101 506 aaKnown RBP2.42□□□□□ -2.02
VPS41YDR080W CLC1P17891 233 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms