RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.43	□□□□□ -1.7	not detected
RPC53	YDL150W	CTL1	Q03220	320 aa	Known RBP	4.43	□□□□□ -1.7
RPC53	YDL150W	MZM1	Q03429	123 aa	Predicted RBP	4.43	□□□□□ -1.7
RPC53	YDL150W	UTP21	Q06078	939 aa	Predicted RBP	4.43	□□□□□ -1.7
RPC53	YDL150W	YTH1	Q06102	208 aa	Predicted RBP	4.43	□□□□□ -1.7
RPC53	YDL150W	ATG26	Q06321	1198 aa		4.43	□□□□□ -1.7
RPC53	YDL150W	VAC14	Q06708	880 aa		4.43	□□□□□ -1.7
RPC53	YDL150W	SIL1	Q08199	421 aa		4.43	□□□□□ -1.7
RPC53	YDL150W	DAS2	Q12084	232 aa		4.43	□□□□□ -1.7
RPC53	YDL150W	YPT6	Q99260	215 aa		4.43	□□□□□ -1.7
RPC53	YDL150W	GAL80	P04387	435 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	RPS3	P05750	240 aa	Known RBP	4.42	□□□□□ -1.7
RPC53	YDL150W	HAP2	P06774	265 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.42	□□□□□ -1.7	not detected
RPC53	YDL150W	CHS1	P08004	1131 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	MAS1	P10507	462 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	BOS1	P25385	244 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	PGS1	P25578	521 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	PEX34	P25584	144 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	FRE1	P32791	686 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	YKL100C	P34248	587 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	HMT1	P38074	348 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	SHE3	P38272	425 aa	Known RBP	4.42	□□□□□ -1.7
RPC53	YDL150W	VRG4	P40107	337 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	YIL169C	P40442	995 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	PHO86	P46956	311 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	MND1	P53102	219 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	YGR111W	P53265	400 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	TIM10	P87108	93 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	GYL1	Q04322	720 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	YDR222W	Q04925	415 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	YLR281C	Q05863	155 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	YOL159C	Q08300	171 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	NRT1	Q08485	598 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	MSB2	P32334	1306 aa		4.42	□□□□□ -1.7
RPC53	YDL150W	JIP3	O13555	125 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	PHO2	P07269	559 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	PUT2	P07275	575 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	CKI1	P20485	582 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	BUD5	P25300	642 aa	Predicted RBP	4.41	□□□□□ -1.7
RPC53	YDL150W	IMG1	P25626	169 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	HXT1	P32465	570 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	YBR144C	P34215	104 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	YBL055C	P34220	418 aa	Predicted RBP	4.41	□□□□□ -1.7
RPC53	YDL150W	SEF1	P34228	1148 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	BLI1	P35727	113 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	ICS2	P38284	255 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	HIS2	P38635	335 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	YEL075C	P39972	122 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	ALG5	P40350	334 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	KAP114	P53067	1004 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	LCL3	P53153	274 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	SGF73	P53165	657 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.41	□□□□□ -1.7	not detected
RPC53	YDL150W	YNL181W	P53878	407 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	BET4	Q00618	327 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	DIG1	Q03063	452 aa	Known RBP	4.41	□□□□□ -1.7
RPC53	YDL150W	ARO80	Q04052	950 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	YMR114C	Q04471	368 aa	Known RBP	4.41	□□□□□ -1.7
RPC53	YDL150W	SML1	Q04964	104 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	TEN1	Q07921	160 aa		4.41	□□□□□ -1.7
RPC53	YDL150W	DBF4	P32325	704 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	KDX1	P36005	433 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	RRT2	P38332	387 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	UBA4	P38820	440 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	PHO90	P39535	881 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	ASG7	P46993	209 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	BRO1	P48582	844 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	HOP2	P53187	214 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	BTN2	P53286	410 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	MRPL19	P53875	158 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	VPS60	Q03390	229 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	FIN1	Q03898	291 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	PRM6	Q04705	352 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	ADE13	Q05911	482 aa	Known RBP	4.4	□□□□□ -1.71
RPC53	YDL150W	GRC3	Q07845	632 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	TAF10	Q12030	206 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	EMP46	Q12396	444 aa		4.4	□□□□□ -1.71
RPC53	YDL150W	PDH1	Q12428	516 aa	Known RBP	4.4	□□□□□ -1.71
RPC53	YDL150W	RPL42A	P0CX27	106 aa	Known RBP	4.39	□□□□□ -1.71
RPC53	YDL150W	RPL42B	P0CX28	106 aa	Known RBP	4.39	□□□□□ -1.71
RPC53	YDL150W	PAP1	P29468	568 aa	Known RBP	4.39	□□□□□ -1.71
RPC53	YDL150W	TKL2	P33315	681 aa		4.39	□□□□□ -1.71
RPC53	YDL150W	RCK2	P38623	610 aa		4.39	□□□□□ -1.71
RPC53	YDL150W	LEU5	P38702	357 aa		4.39	□□□□□ -1.71
RPC53	YDL150W	ANS1	P38832	159 aa		4.39	□□□□□ -1.71
RPC53	YDL150W	SMF1	P38925	575 aa		4.39	□□□□□ -1.71
RPC53	YDL150W	CIN4	P39110	191 aa		4.39	□□□□□ -1.71
RPC53	YDL150W	DSE1	P40077	573 aa		4.39	□□□□□ -1.71
RPC53	YDL150W	IAH1	P41734	238 aa		4.39	□□□□□ -1.71
RPC53	YDL150W	CWC22	P53333	577 aa	Known RBP	4.39	□□□□□ -1.71
RPC53	YDL150W	YNL234W	P53857	426 aa		4.39	□□□□□ -1.71
RPC53	YDL150W	GPM2	Q12008	311 aa		4.39	□□□□□ -1.71
RPC53	YDL150W	VPS54	Q12071	889 aa		4.39	□□□□□ -1.71
RPC53	YDL150W	SPE3	Q12074	293 aa	Known RBP	4.39	□□□□□ -1.71
RPC53	YDL150W	YLR112W	Q12130	139 aa		4.39	□□□□□ -1.71
RPC53	YDL150W	HRT3	Q12347	344 aa		4.39	□□□□□ -1.71
RPC53	YDL150W	AVL9	Q12500	764 aa		4.39	□□□□□ -1.71
RPC53	YDL150W	BI3	Q9ZZW7	517 aa		4.39	□□□□□ -1.71
RPC53	YDL150W	UBR1	P19812	1950 aa		4.39	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms