RNA–Protein interactions for RNA: YDL107W

MSS2, Transcript of Peripherally bound inner membrane protein of the mitochondrial matrix, yeast

Gene MSS2, Length 1,056 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS2	YDL107W	CYB2	P00175	591 aa		4	□□□□□ -1.77
MSS2	YDL107W	MRS3	P10566	314 aa		4	□□□□□ -1.77
MSS2	YDL107W	CDC23	P16522	626 aa		4	□□□□□ -1.77
MSS2	YDL107W	ALG1	P16661	449 aa		4	□□□□□ -1.77
MSS2	YDL107W	SEC1	P30619	724 aa	Known RBP	4	□□□□□ -1.77
MSS2	YDL107W	GLC7	P32598	312 aa	Known RBP	4	□□□□□ -1.77
MSS2	YDL107W	MTC4	P38335	694 aa	Known RBP	4	□□□□□ -1.77
MSS2	YDL107W	PHB2	P50085	310 aa		4	□□□□□ -1.77
MSS2	YDL107W	AVT4	P50944	713 aa		4	□□□□□ -1.77
MSS2	YDL107W	POP6	P53218	158 aa		4	□□□□□ -1.77
MSS2	YDL107W	TAF12	Q03761	539 aa		4	□□□□□ -1.77
MSS2	YDL107W	PRP42	Q03776	544 aa	Known RBP	4	□□□□□ -1.77
MSS2	YDL107W	RPN9	Q04062	393 aa	Known RBP	4	□□□□□ -1.77
MSS2	YDL107W	DAP1	Q12091	152 aa		4	□□□□□ -1.77
MSS2	YDL107W	YPR022C	Q12139	1133 aa		4	□□□□□ -1.77
MSS2	YDL107W	CTR86	P25355	563 aa		3.99	□□□□□ -1.77
MSS2	YDL107W	MSP1	P28737	362 aa		3.99	□□□□□ -1.77
MSS2	YDL107W	CRM1	P30822	1084 aa	Known RBP	3.99	□□□□□ -1.77
MSS2	YDL107W	SPC110	P32380	944 aa		3.99	□□□□□ -1.77
MSS2	YDL107W	CYS4	P32582	507 aa	Known RBP	3.99	□□□□□ -1.77
MSS2	YDL107W	ANP1	P32629	500 aa		3.99	□□□□□ -1.77
MSS2	YDL107W	RRP1	P35178	278 aa	Predicted RBP	3.99	□□□□□ -1.77
MSS2	YDL107W	DAD2	P36162	133 aa		3.99	□□□□□ -1.77
MSS2	YDL107W	GAT2	P40209	560 aa		3.99	□□□□□ -1.77
MSS2	YDL107W	PIR3	Q03180	325 aa		3.99	□□□□□ -1.77
MSS2	YDL107W	CUE5	Q08412	411 aa	Known RBP	3.99	□□□□□ -1.77
MSS2	YDL107W	PGC1	Q08959	321 aa		3.99	□□□□□ -1.77
MSS2	YDL107W	ORT1	Q12375	292 aa		3.99	□□□□□ -1.77
MSS2	YDL107W	ARG4	P04076	463 aa	Predicted RBP	3.98	□□□□□ -1.77
MSS2	YDL107W	RPL15A	P05748	204 aa	Known RBP	3.98	□□□□□ -1.77
MSS2	YDL107W	RPL20A	P0CX23	172 aa	Known RBP	3.98	□□□□□ -1.77
MSS2	YDL107W	RPL20B	P0CX24	172 aa	Predicted RBP	3.98	□□□□□ -1.77
MSS2	YDL107W	SAM1	P10659	382 aa	Known RBP	3.98	□□□□□ -1.77
MSS2	YDL107W	SAM2	P19358	384 aa	Known RBP	3.98	□□□□□ -1.77
MSS2	YDL107W	RAD57	P25301	460 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	PHO91	P27514	894 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	ATS1	P31386	333 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	HSP104	P31539	908 aa	Known RBP	3.98	□□□□□ -1.77
MSS2	YDL107W	PMU1	P36069	295 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	YSW1	P38280	609 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	MLH1	P38920	769 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	YAL037W	P39728	267 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	YAT2	P40017	923 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	YJL070C	P40361	888 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	GCD10	P41814	478 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	YFR016C	P43597	1233 aa	Known RBP	3.98	□□□□□ -1.77
MSS2	YDL107W	YIP5	P53108	310 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	ROG1	P53118	685 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	ARK1	P53974	638 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	BET5	Q03630	159 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	YDR341C	Q05506	607 aa	Known RBP	3.98	□□□□□ -1.77
MSS2	YDL107W	GRS2	Q06817	618 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	YPL199C	Q08954	240 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	AYT1	Q12226	474 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	SET6	Q12529	373 aa		3.98	□□□□□ -1.77
MSS2	YDL107W	ILV5	P06168	395 aa	Known RBP	3.97	□□□□□ -1.77
MSS2	YDL107W	CDC21	P06785	304 aa		3.97	□□□□□ -1.77
MSS2	YDL107W	PHO84	P25297	587 aa	Known RBP	3.97	□□□□□ -1.77
MSS2	YDL107W	LSB5	P25369	354 aa		3.97	□□□□□ -1.77
MSS2	YDL107W	TIP1	P27654	210 aa	Predicted RBP	3.97	□□□□□ -1.77
MSS2	YDL107W	MRPL4	P36517	319 aa		3.97	□□□□□ -1.77
MSS2	YDL107W	GDT1	P38301	280 aa	Predicted RBP	3.97	□□□□□ -1.77
MSS2	YDL107W	STN1	P38960	494 aa		3.97	□□□□□ -1.77
MSS2	YDL107W	YER079W	P40052	210 aa	Known RBP	3.97	□□□□□ -1.77
MSS2	YDL107W	RPR2	P40571	144 aa		3.97	□□□□□ -1.77
MSS2	YDL107W	BRO1	P48582	844 aa		3.97	□□□□□ -1.77
MSS2	YDL107W	TOF1	P53840	1238 aa		3.97	□□□□□ -1.77
MSS2	YDL107W	GPI15	P53961	229 aa		3.97	□□□□□ -1.77
MSS2	YDL107W	MEH1	Q02205	184 aa		3.97	□□□□□ -1.77
MSS2	YDL107W	RSN1	Q03516	953 aa		3.97	□□□□□ -1.77
MSS2	YDL107W	HCR1	Q05775	265 aa	Known RBP	3.97	□□□□□ -1.77
MSS2	YDL107W	SGT1	Q08446	395 aa		3.97	□□□□□ -1.77
MSS2	YDL107W	SKI7	Q08491	747 aa	Predicted RBP	3.97	□□□□□ -1.77
MSS2	YDL107W	TIM18	Q08749	192 aa		3.97	□□□□□ -1.77
MSS2	YDL107W	PKH2	Q12236	1081 aa	Known RBP	3.97	□□□□□ -1.77
MSS2	YDL107W	RUP1	Q12242	671 aa		3.97	□□□□□ -1.77
MSS2	YDL107W	TEF1	P02994	458 aa	Known RBP	3.96	□□□□□ -1.78
MSS2	YDL107W	ATR1	P13090	542 aa		3.96	□□□□□ -1.78
MSS2	YDL107W	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
MSS2	YDL107W	SMI1	P32566	505 aa		3.96	□□□□□ -1.78
MSS2	YDL107W	GPI16	P38875	610 aa		3.96	□□□□□ -1.78
MSS2	YDL107W	MNL1	P38888	796 aa		3.96	□□□□□ -1.78
MSS2	YDL107W	RPH1	P39956	796 aa		3.96	□□□□□ -1.78
MSS2	YDL107W	YPS6	P40583	537 aa		3.96	□□□□□ -1.78
MSS2	YDL107W	LAM5	P43560	674 aa		3.96	□□□□□ -1.78
MSS2	YDL107W	SSN8	P47821	323 aa		3.96	□□□□□ -1.78
MSS2	YDL107W	MRP51	Q02950	344 aa		3.96	□□□□□ -1.78
MSS2	YDL107W	ERP1	Q05359	219 aa	Known RBP	3.96	□□□□□ -1.78
MSS2	YDL107W	TIP41	Q12199	356 aa		3.96	□□□□□ -1.78
MSS2	YDL107W	ATG34	Q12292	412 aa		3.96	□□□□□ -1.78
MSS2	YDL107W	DST1	P07273	309 aa		3.95	□□□□□ -1.78
MSS2	YDL107W	CHS1	P08004	1131 aa		3.95	□□□□□ -1.78
MSS2	YDL107W	NFT1	P0CE68	1218 aa		3.95	□□□□□ -1.78
MSS2	YDL107W	IMA3	P0CW40	589 aa		3.95	□□□□□ -1.78
MSS2	YDL107W	IMA4	P0CW41	589 aa		3.95	□□□□□ -1.78
MSS2	YDL107W	TPM1	P17536	199 aa	Known RBP	3.95	□□□□□ -1.78
MSS2	YDL107W	DAP2	P18962	818 aa		3.95	□□□□□ -1.78
MSS2	YDL107W	PRO3	P32263	286 aa	Known RBP	3.95	□□□□□ -1.78
MSS2	YDL107W	NIP1	P32497	812 aa	Known RBP	3.95	□□□□□ -1.78
MSS2	YDL107W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.95	□□□□□ -1.78	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 44.2 ms