RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W PTP1P25044 335 aa5.39□□□□□ -1.55
SHM1YBR263W AGP1P25376 633 aa5.39□□□□□ -1.55
SHM1YBR263W BUB3P26449 341 aa5.39□□□□□ -1.55
SHM1YBR263W FUN30P31380 1131 aa5.39□□□□□ -1.55
SHM1YBR263W MVD1P32377 396 aaKnown RBP5.39□□□□□ -1.55
SHM1YBR263W SIC1P38634 284 aa5.39□□□□□ -1.55
SHM1YBR263W FAA3P39002 694 aa5.39□□□□□ -1.55
SHM1YBR263W AIM20P40451 204 aa5.39□□□□□ -1.55
SHM1YBR263W SPT20P50875 604 aa5.39□□□□□ -1.55
SHM1YBR263W YAT1P80235 687 aa5.39□□□□□ -1.55
SHM1YBR263W MET31Q03081 177 aa5.39□□□□□ -1.55
SHM1YBR263W YLR413WQ06689 675 aa5.39□□□□□ -1.55
SHM1YBR263W CDA1Q06702 301 aa5.39□□□□□ -1.55
SHM1YBR263W UAF30Q08747 228 aa5.39□□□□□ -1.55
SHM1YBR263W YOR352WQ08816 343 aa5.39□□□□□ -1.55
SHM1YBR263W HUA2Q12134 243 aa5.39□□□□□ -1.55
SHM1YBR263W SKM1Q12469 655 aa5.39□□□□□ -1.55
SHM1YBR263W RRP36Q12481 300 aaPredicted RBP5.39□□□□□ -1.55
SHM1YBR263W HFA1P32874 2273 aa5.38□□□□□ -1.55
SHM1YBR263W GAL4P04386 881 aa5.38□□□□□ -1.55
SHM1YBR263W ADE1P27616 306 aa5.38□□□□□ -1.55
SHM1YBR263W YCR087C-AP37263 153 aa5.38□□□□□ -1.55
SHM1YBR263W CCZ1P38273 704 aa5.38□□□□□ -1.55
SHM1YBR263W TSC10P38342 320 aa5.38□□□□□ -1.55
SHM1YBR263W TAT2P38967 592 aa5.38□□□□□ -1.55
SHM1YBR263W FRT2P39734 528 aa5.38□□□□□ -1.55
SHM1YBR263W PIC2P40035 300 aa5.38□□□□□ -1.55
SHM1YBR263W SEC26P41810 973 aaKnown RBP5.38□□□□□ -1.55
SHM1YBR263W USE1P53146 245 aa5.38□□□□□ -1.55
SHM1YBR263W TNA1P53322 534 aa5.38□□□□□ -1.55
SHM1YBR263W ESF2P53743 316 aaKnown RBP5.38□□□□□ -1.55
SHM1YBR263W PRP38Q00723 242 aaPredicted RBP5.38□□□□□ -1.55
SHM1YBR263W ECM11Q04110 302 aa5.38□□□□□ -1.55
SHM1YBR263W MUS81Q04149 632 aaPredicted RBP5.38□□□□□ -1.55
SHM1YBR263W RRP45Q05636 305 aaKnown RBP5.38□□□□□ -1.55
SHM1YBR263W RRP15Q06511 250 aaPredicted RBP5.38□□□□□ -1.55
SHM1YBR263W DIA2Q08496 732 aaPredicted RBP5.38□□□□□ -1.55
SHM1YBR263W NMD4Q12129 218 aa5.38□□□□□ -1.55
SHM1YBR263W JLP1Q12358 412 aa5.38□□□□□ -1.55
SHM1YBR263W SAS5Q99314 248 aa5.38□□□□□ -1.55
SHM1YBR263W CYC1P00044 109 aaPredicted RBP5.37□□□□□ -1.55
SHM1YBR263W HOP1P20050 605 aa5.37□□□□□ -1.55
SHM1YBR263W PRP2P20095 876 aaPredicted RBP5.37□□□□□ -1.55
SHM1YBR263W PHO91P27514 894 aa5.37□□□□□ -1.55
SHM1YBR263W HOG1P32485 435 aa5.37□□□□□ -1.55
SHM1YBR263W CDC5P32562 705 aa5.37□□□□□ -1.55
SHM1YBR263W ATO2P32907 282 aa5.37□□□□□ -1.55
SHM1YBR263W FTH1P38310 465 aa5.37□□□□□ -1.55
SHM1YBR263W ATG7P38862 630 aa5.37□□□□□ -1.55
SHM1YBR263W GUS1P46655 708 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
SHM1YBR263W AIM22P47051 409 aa5.37□□□□□ -1.55
SHM1YBR263W GTO1P48239 356 aa5.37□□□□□ -1.55
SHM1YBR263W HNT2P49775 206 aa5.37□□□□□ -1.55
SHM1YBR263W BIO3P50277 480 aa5.37□□□□□ -1.55
SHM1YBR263W IMA1P53051 589 aa5.37□□□□□ -1.55
SHM1YBR263W YNL140CP53910 189 aa5.37□□□□□ -1.55
SHM1YBR263W IDP3P53982 420 aaKnown RBP5.37□□□□□ -1.55
SHM1YBR263W BSC6Q08280 497 aa5.37□□□□□ -1.55
SHM1YBR263W SGT1Q08446 395 aa5.37□□□□□ -1.55
SHM1YBR263W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55 RIP-Chip
SHM1YBR263W YKL018C-AQ3E7A7 99 aa5.37□□□□□ -1.55
SHM1YBR263W LAG2Q92325 660 aa5.37□□□□□ -1.55
SHM1YBR263W ARD1P07347 238 aaPredicted RBP5.36□□□□□ -1.55
SHM1YBR263W TY2A-LR1P0C2J4 438 aa5.36□□□□□ -1.55
SHM1YBR263W TY2A-FP0CX61 438 aa5.36□□□□□ -1.55
SHM1YBR263W TY2A-GR2P0CX62 438 aa5.36□□□□□ -1.55
SHM1YBR263W KAR1P11927 433 aa5.36□□□□□ -1.55
SHM1YBR263W PHO81P17442 1178 aa5.36□□□□□ -1.55
SHM1YBR263W SLM5P25345 492 aaKnown RBP5.36□□□□□ -1.55
SHM1YBR263W TY2A-CP25383 438 aa5.36□□□□□ -1.55
SHM1YBR263W ERG1P32476 496 aaKnown RBP5.36□□□□□ -1.55
SHM1YBR263W CUE2P36075 443 aaKnown RBP5.36□□□□□ -1.55
SHM1YBR263W APT2P36973 181 aa5.36□□□□□ -1.55
SHM1YBR263W ALG3P38179 458 aa5.36□□□□□ -1.55
SHM1YBR263W EHT1P38295 451 aa5.36□□□□□ -1.55
SHM1YBR263W UME6P39001 836 aa5.36□□□□□ -1.55
SHM1YBR263W MAD2P40958 196 aa5.36□□□□□ -1.55
SHM1YBR263W CCT7P42943 550 aaKnown RBP5.36□□□□□ -1.55
SHM1YBR263W FMP32P43557 207 aa5.36□□□□□ -1.55
SHM1YBR263W ALK1P43633 760 aaKnown RBP5.36□□□□□ -1.55
SHM1YBR263W TMA22P47089 198 aaPredicted RBP5.36□□□□□ -1.55
SHM1YBR263W IRC15Q02733 499 aa5.36□□□□□ -1.55
SHM1YBR263W PRP3Q03338 469 aaPredicted RBP5.36□□□□□ -1.55
SHM1YBR263W TY2A-DR2Q03483 438 aa5.36□□□□□ -1.55
SHM1YBR263W GIS1Q03833 894 aa5.36□□□□□ -1.55
SHM1YBR263W DIC1Q06143 298 aa5.36□□□□□ -1.55
SHM1YBR263W GGA1Q06336 557 aa5.36□□□□□ -1.55
SHM1YBR263W IRC13Q08630 104 aa5.36□□□□□ -1.55
SHM1YBR263W YPR202WQ08993 238 aa5.36□□□□□ -1.55
SHM1YBR263W TY2A-BQ12260 438 aa5.36□□□□□ -1.55
SHM1YBR263W TY2A-OR2Q12293 438 aa5.36□□□□□ -1.55
SHM1YBR263W YDR061WQ12298 539 aa5.36□□□□□ -1.55
SHM1YBR263W TY2A-DR1Q12392 438 aa5.36□□□□□ -1.55
SHM1YBR263W WHI5Q12416 295 aa5.36□□□□□ -1.55
SHM1YBR263W TY2A-OR1Q12439 438 aa5.36□□□□□ -1.55
SHM1YBR263W TY2A-DR3Q99303 438 aa5.36□□□□□ -1.55
SHM1YBR263W GCD2P12754 651 aaPredicted RBP5.35□□□□□ -1.55
SHM1YBR263W YCR006CP25350 157 aa5.35□□□□□ -1.55
SHM1YBR263W SPS22P25380 463 aa5.35□□□□□ -1.55
SHM1YBR263W DGR2P32330 852 aa5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms