RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	PGS1	P25578	521 aa		4.17	□□□□□ -1.74
SLX1	YBR228W	GCG1	P32656	232 aa	Known RBP	4.17	□□□□□ -1.74
SLX1	YBR228W	IFA38	P38286	347 aa		4.17	□□□□□ -1.74
SLX1	YBR228W	FHL1	P39521	936 aa		4.17	□□□□□ -1.74
SLX1	YBR228W	MMF1	P40185	145 aa	Known RBP	4.17	□□□□□ -1.74
SLX1	YBR228W	TMA108	P40462	946 aa		4.17	□□□□□ -1.74
SLX1	YBR228W	YIL054W	P40524	105 aa		4.17	□□□□□ -1.74
SLX1	YBR228W	PKP1	P40530	394 aa		4.17	□□□□□ -1.74
SLX1	YBR228W	GUF1	P46943	645 aa		4.17	□□□□□ -1.74
SLX1	YBR228W	VTI1	Q04338	217 aa		4.17	□□□□□ -1.74
SLX1	YBR228W	KAP95	Q06142	861 aa	Known RBP	4.17	□□□□□ -1.74
SLX1	YBR228W	APC5	Q08683	685 aa		4.17	□□□□□ -1.74
SLX1	YBR228W	TOR2	P32600	2474 aa	Known RBP	4.17	□□□□□ -1.74
SLX1	YBR228W	UBR1	P19812	1950 aa		4.16	□□□□□ -1.74
SLX1	YBR228W	TOR1	P35169	2470 aa		4.16	□□□□□ -1.74
SLX1	YBR228W	CNS1	P33313	385 aa		4.16	□□□□□ -1.74
SLX1	YBR228W	RRP1	P35178	278 aa	Predicted RBP	4.16	□□□□□ -1.74
SLX1	YBR228W	PCA1	P38360	1216 aa		4.16	□□□□□ -1.74
SLX1	YBR228W	MMS21	P38632	267 aa		4.16	□□□□□ -1.74
SLX1	YBR228W	DPB11	P47027	764 aa	Predicted RBP	4.16	□□□□□ -1.74
SLX1	YBR228W	IKS1	P47042	667 aa		4.16	□□□□□ -1.74
SLX1	YBR228W	YNL247W	P53852	767 aa	Known RBP	4.16	□□□□□ -1.74
SLX1	YBR228W	YNL040W	P53960	456 aa	Predicted RBP	4.16	□□□□□ -1.74
SLX1	YBR228W	HER2	Q03557	464 aa		4.16	□□□□□ -1.74
SLX1	YBR228W	MSS11	Q03825	758 aa		4.16	□□□□□ -1.74
SLX1	YBR228W	SPG3	Q04398	127 aa	Predicted RBP	4.16	□□□□□ -1.74
SLX1	YBR228W	ADE13	Q05911	482 aa	Known RBP	4.16	□□□□□ -1.74
SLX1	YBR228W	THI20	Q08224	551 aa		4.16	□□□□□ -1.74
SLX1	YBR228W	YDR018C	Q12185	396 aa		4.16	□□□□□ -1.74
SLX1	YBR228W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
SLX1	YBR228W	REV1	P12689	985 aa		4.15	□□□□□ -1.75
SLX1	YBR228W	RPO26	P20435	155 aa		4.15	□□□□□ -1.75
SLX1	YBR228W	MEI4	P29467	408 aa		4.15	□□□□□ -1.75
SLX1	YBR228W	ACH1	P32316	526 aa		4.15	□□□□□ -1.75
SLX1	YBR228W	TIF5	P38431	405 aa	Known RBP	4.15	□□□□□ -1.75
SLX1	YBR228W	MSG5	P38590	489 aa		4.15	□□□□□ -1.75
SLX1	YBR228W	DED81	P38707	554 aa	Known RBP	4.15	□□□□□ -1.75
SLX1	YBR228W	ERP2	P39704	215 aa		4.15	□□□□□ -1.75
SLX1	YBR228W	FLC2	P39719	783 aa		4.15	□□□□□ -1.75
SLX1	YBR228W	MKT1	P40850	830 aa	Known RBP	4.15	□□□□□ -1.75
SLX1	YBR228W	AXL1	P40851	1208 aa		4.15	□□□□□ -1.75
SLX1	YBR228W	SAP185	P40856	1058 aa		4.15	□□□□□ -1.75
SLX1	YBR228W	YML6	P51998	286 aa		4.15	□□□□□ -1.75
SLX1	YBR228W	AIM32	Q04689	311 aa		4.15	□□□□□ -1.75
SLX1	YBR228W	NOP6	Q07623	225 aa	Known RBP	4.15	□□□□□ -1.75
SLX1	YBR228W	YEH2	Q07950	538 aa		4.15	□□□□□ -1.75
SLX1	YBR228W	VCX1	Q99385	411 aa		4.15	□□□□□ -1.75
SLX1	YBR228W	CDC8	P00572	216 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	APA1	P16550	321 aa	Known RBP	4.14	□□□□□ -1.75
SLX1	YBR228W	SLY1	P22213	666 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	GPI10	P30777	616 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	HXT3	P32466	567 aa	Known RBP	4.14	□□□□□ -1.75
SLX1	YBR228W	SPC34	P36131	295 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	AVT5	P38176	459 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	YBR225W	P38321	900 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	VHC1	P38329	1120 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	ANS1	P38832	159 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	YMR134W	P40207	237 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	YNL320W	P42840	284 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	PEX31	P53203	462 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	KTR6	P54070	446 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	UTP6	Q02354	440 aa	Known RBP	4.14	□□□□□ -1.75
SLX1	YBR228W	INA17	Q02888	182 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	BLS1	Q06071	122 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	RIO1	Q12196	484 aa	Known RBP	4.14	□□□□□ -1.75
SLX1	YBR228W	IZH4	Q99393	312 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	FAB1	P34756	2278 aa		4.14	□□□□□ -1.75
SLX1	YBR228W	CBS2	P14905	389 aa		4.13	□□□□□ -1.75
SLX1	YBR228W	MET16	P18408	261 aa	Predicted RBP	4.13	□□□□□ -1.75
SLX1	YBR228W	ERG8	P24521	451 aa		4.13	□□□□□ -1.75
SLX1	YBR228W	YIH1	P25637	258 aa		4.13	□□□□□ -1.75
SLX1	YBR228W	SYN8	P31377	255 aa		4.13	□□□□□ -1.75
SLX1	YBR228W	UBC6	P33296	250 aa	Predicted RBP	4.13	□□□□□ -1.75
SLX1	YBR228W	LAS1	P36146	502 aa	Predicted RBP	4.13	□□□□□ -1.75
SLX1	YBR228W	OLA1	P38219	394 aa	Known RBP	4.13	□□□□□ -1.75
SLX1	YBR228W	MIC19	P43594	170 aa		4.13	□□□□□ -1.75
SLX1	YBR228W	RRT5	P43607	289 aa		4.13	□□□□□ -1.75
SLX1	YBR228W	UBX4	P54730	416 aa		4.13	□□□□□ -1.75
SLX1	YBR228W	RPL22B	P56628	122 aa	Known RBP	4.13	□□□□□ -1.75
SLX1	YBR228W	SPE3	Q12074	293 aa	Known RBP	4.13	□□□□□ -1.75
SLX1	YBR228W	NOP58	Q12499	511 aa	Known RBP	4.13	□□□□□ -1.75
SLX1	YBR228W	YDR034W-B	Q6Q5X2	51 aa		4.13	□□□□□ -1.75
SLX1	YBR228W	GDH1	P07262	454 aa	Known RBP	4.12	□□□□□ -1.75
SLX1	YBR228W	PEP5	P12868	1029 aa		4.12	□□□□□ -1.75
SLX1	YBR228W	TYR1	P20049	452 aa		4.12	□□□□□ -1.75
SLX1	YBR228W	NFU1	P32860	256 aa		4.12	□□□□□ -1.75
SLX1	YBR228W	ECM13	P38195	257 aa		4.12	□□□□□ -1.75
SLX1	YBR228W	POP4	P38336	279 aa		4.12	□□□□□ -1.75
SLX1	YBR228W	AIM18	P38884	321 aa		4.12	□□□□□ -1.75
SLX1	YBR228W	PRM9	P39551	298 aa		4.12	□□□□□ -1.75
SLX1	YBR228W	BTT1	P40314	149 aa	Predicted RBP	4.12	□□□□□ -1.75
SLX1	YBR228W	RPS0B	P46654	252 aa	Known RBP	4.12	□□□□□ -1.75
SLX1	YBR228W	STR3	P53101	465 aa	Known RBP	4.12	□□□□□ -1.75
SLX1	YBR228W	PIR3	Q03180	325 aa		4.12	□□□□□ -1.75
SLX1	YBR228W	YPQ1	Q12010	308 aa		4.12	□□□□□ -1.75
SLX1	YBR228W	YLL056C	Q12177	298 aa		4.12	□□□□□ -1.75
SLX1	YBR228W	INP53	Q12271	1107 aa		4.12	□□□□□ -1.75
SLX1	YBR228W	GPM3	Q12326	303 aa		4.12	□□□□□ -1.75
SLX1	YBR228W	YLR302C	O13544	120 aa		4.11	□□□□□ -1.75
SLX1	YBR228W	HIS1	P00498	297 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms