RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C AFG1P32317 509 aa2.24□□□□□ -2.05
RPB5YBR154C APE2P32454 952 aaKnown RBP2.24□□□□□ -2.05
RPB5YBR154C KAR9P32526 644 aa2.24□□□□□ -2.05
RPB5YBR154C BYE1P36106 594 aa2.24□□□□□ -2.05
RPB5YBR154C THI2P38141 450 aa2.24□□□□□ -2.05
RPB5YBR154C CHK1P38147 527 aa2.24□□□□□ -2.05
RPB5YBR154C YHR131CP38835 850 aa2.24□□□□□ -2.05
RPB5YBR154C LSM5P40089 93 aaKnown RBP2.24□□□□□ -2.05
RPB5YBR154C MET28P40573 187 aa2.24□□□□□ -2.05
RPB5YBR154C PET130P47065 347 aa2.24□□□□□ -2.05
RPB5YBR154C HSP31Q04432 237 aa2.24□□□□□ -2.05
RPB5YBR154C RTN2Q12443 393 aa2.24□□□□□ -2.05
RPB5YBR154C CYC3P06182 269 aa2.23□□□□□ -2.05
RPB5YBR154C PDX1P16451 410 aa2.23□□□□□ -2.05
RPB5YBR154C RPC53P25441 422 aa2.23□□□□□ -2.05
RPB5YBR154C RAD14P28519 371 aa2.23□□□□□ -2.05
RPB5YBR154C VMA8P32610 256 aaKnown RBP2.23□□□□□ -2.05
RPB5YBR154C MRPS9P38120 278 aa2.23□□□□□ -2.05
RPB5YBR154C CST26P38226 397 aa2.23□□□□□ -2.05
RPB5YBR154C YEL057CP39983 233 aa2.23□□□□□ -2.05
RPB5YBR154C MET18P40469 1032 aa2.23□□□□□ -2.05
RPB5YBR154C GPD2P41911 440 aaKnown RBP2.23□□□□□ -2.05
RPB5YBR154C YGR250CP53316 781 aaKnown RBP2.23□□□□□ -2.05
RPB5YBR154C FRE4P53746 719 aa2.23□□□□□ -2.05
RPB5YBR154C JJJ1P53863 590 aa2.23□□□□□ -2.05
RPB5YBR154C YMR155WQ03795 547 aa2.23□□□□□ -2.05
RPB5YBR154C NDE2Q07500 545 aa2.23□□□□□ -2.05
RPB5YBR154C IES4Q08561 116 aa2.23□□□□□ -2.05
RPB5YBR154C RIM20Q12033 661 aa2.23□□□□□ -2.05
RPB5YBR154C GRX6Q12438 231 aa2.23□□□□□ -2.05
RPB5YBR154C PSK1P31374 1356 aa2.23□□□□□ -2.05
RPB5YBR154C ITR1P30605 584 aa2.22□□□□□ -2.05
RPB5YBR154C CSE2P33308 149 aa2.22□□□□□ -2.05
RPB5YBR154C PXA2P34230 853 aa2.22□□□□□ -2.05
RPB5YBR154C PEX5P35056 612 aa2.22□□□□□ -2.05
RPB5YBR154C BLI1P35727 113 aa2.22□□□□□ -2.05
RPB5YBR154C YBR137WP38276 179 aa2.22□□□□□ -2.05
RPB5YBR154C SMF1P38925 575 aa2.22□□□□□ -2.05
RPB5YBR154C DOT5P40553 215 aa2.22□□□□□ -2.05
RPB5YBR154C TFG2P41896 400 aaPredicted RBP2.22□□□□□ -2.05
RPB5YBR154C SSU1P41930 458 aa2.22□□□□□ -2.05
RPB5YBR154C YGR149WP48236 432 aa2.22□□□□□ -2.05
RPB5YBR154C YML6P51998 286 aa2.22□□□□□ -2.05
RPB5YBR154C TWF1P53250 332 aa2.22□□□□□ -2.05
RPB5YBR154C ADA2Q02336 434 aa2.22□□□□□ -2.05
RPB5YBR154C AIM32Q04689 311 aa2.22□□□□□ -2.05
RPB5YBR154C PLP2Q12017 286 aa2.22□□□□□ -2.05
RPB5YBR154C SNU66Q12420 587 aaPredicted RBP2.22□□□□□ -2.05
RPB5YBR154C HOM3P10869 527 aa2.21□□□□□ -2.06
RPB5YBR154C NAM2P11325 894 aa2.21□□□□□ -2.06
RPB5YBR154C RPI1P23250 407 aaKnown RBP2.21□□□□□ -2.06
RPB5YBR154C SPB1P25582 841 aaPredicted RBP2.21□□□□□ -2.06
RPB5YBR154C IDH2P28241 369 aaKnown RBP2.21□□□□□ -2.06
RPB5YBR154C SRP72P38688 640 aaKnown RBP2.21□□□□□ -2.06
RPB5YBR154C LYS1P38998 373 aaRIP-Chip data2.21□□□□□ -2.06not detected
RPB5YBR154C SEO1P39709 593 aa2.21□□□□□ -2.06
RPB5YBR154C MIG3P39943 394 aa2.21□□□□□ -2.06
RPB5YBR154C MDE1P47095 244 aa2.21□□□□□ -2.06
RPB5YBR154C RSC1P53236 928 aa2.21□□□□□ -2.06
RPB5YBR154C MKC7P53379 596 aa2.21□□□□□ -2.06
RPB5YBR154C YPR091CQ06833 770 aa2.21□□□□□ -2.06
RPB5YBR154C ATG29Q12092 213 aa2.21□□□□□ -2.06
RPB5YBR154C YRM1Q12340 786 aa2.21□□□□□ -2.06
RPB5YBR154C JID1Q12350 301 aa2.21□□□□□ -2.06
RPB5YBR154C IZH2Q12442 317 aa2.21□□□□□ -2.06
RPB5YBR154C RRD2Q12461 358 aa2.21□□□□□ -2.06
RPB5YBR154C HSP82P02829 709 aaKnown RBP2.2□□□□□ -2.06
RPB5YBR154C CLB3P24870 427 aa2.2□□□□□ -2.06
RPB5YBR154C GPI10P30777 616 aa2.2□□□□□ -2.06
RPB5YBR154C DBF4P32325 704 aa2.2□□□□□ -2.06
RPB5YBR154C PRP21P32524 280 aaPredicted RBP2.2□□□□□ -2.06
RPB5YBR154C SPT10P35208 640 aa2.2□□□□□ -2.06
RPB5YBR154C OTU2P38747 307 aaKnown RBP2.2□□□□□ -2.06
RPB5YBR154C YHR054CP38780 354 aa2.2□□□□□ -2.06
RPB5YBR154C CCT2P39076 527 aaKnown RBP2.2□□□□□ -2.06
RPB5YBR154C MTQ1P53944 314 aa2.2□□□□□ -2.06
RPB5YBR154C YDR131CQ03899 556 aa2.2□□□□□ -2.06
RPB5YBR154C SXM1Q04175 944 aaKnown RBP2.2□□□□□ -2.06
RPB5YBR154C RQC1Q05468 723 aaKnown RBP2.2□□□□□ -2.06
RPB5YBR154C REX4Q08237 289 aa2.2□□□□□ -2.06
RPB5YBR154C SMC6Q12749 1114 aa2.2□□□□□ -2.06
RPB5YBR154C YOL159C-AQ3E769 90 aa2.2□□□□□ -2.06
RPB5YBR154C YML133CQ03099 1374 aa2.2□□□□□ -2.06
RPB5YBR154C YLL067CQ07888 1374 aa2.2□□□□□ -2.06
RPB5YBR154C YLL066CQ99208 1374 aa2.2□□□□□ -2.06
RPB5YBR154C YLR278CQ05854 1341 aa2.19□□□□□ -2.06
RPB5YBR154C SPS4P09937 338 aa2.19□□□□□ -2.06
RPB5YBR154C ADK2P26364 225 aa2.19□□□□□ -2.06
RPB5YBR154C RML2P32611 393 aa2.19□□□□□ -2.06
RPB5YBR154C NIP100P33420 868 aa2.19□□□□□ -2.06
RPB5YBR154C SEC66P33754 206 aa2.19□□□□□ -2.06
RPB5YBR154C CMC1P36064 111 aa2.19□□□□□ -2.06
RPB5YBR154C LRP1P38801 184 aaKnown RBP2.19□□□□□ -2.06
RPB5YBR154C CHS6P40955 746 aa2.19□□□□□ -2.06
RPB5YBR154C YIF1P53845 314 aaKnown RBP2.19□□□□□ -2.06
RPB5YBR154C RMT2Q03305 412 aa2.19□□□□□ -2.06
RPB5YBR154C RCF1Q03713 159 aa2.19□□□□□ -2.06
RPB5YBR154C TAP42Q04372 366 aa2.19□□□□□ -2.06
RPB5YBR154C ISA2Q12425 185 aa2.19□□□□□ -2.06
RPB5YBR154C CLC1P17891 233 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms