RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, humanhuman

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-208ENST00000626716 RSPH10BP0C881 870 aa29.16■■■□□ 2.26
R3HDM4-208ENST00000626716 NEDD9Q14511 834 aa29.16■■■□□ 2.26
R3HDM4-208ENST00000626716 MB21D2Q8IYB1 491 aaPredicted RBP29.16■■■□□ 2.26
R3HDM4-208ENST00000626716 USP26Q9BXU7 913 aa29.16■■■□□ 2.26
R3HDM4-208ENST00000626716 RTEL1Q9NZ71 1219 aa29.16■■■□□ 2.26
R3HDM4-208ENST00000626716 LGALS2P05162 132 aa29.15■■■□□ 2.26
R3HDM4-208ENST00000626716 KCNQ1P51787 676 aa29.15■■■□□ 2.26
R3HDM4-208ENST00000626716 LMCD1Q9NZU5 365 aa29.15■■■□□ 2.26
R3HDM4-208ENST00000626716 SMIM10L2AP0DMW4 78 aa29.14■■■□□ 2.26
R3HDM4-208ENST00000626716 SMIM10L2BP0DMW5 78 aa29.14■■■□□ 2.26
R3HDM4-208ENST00000626716 SMARCA1P28370 1054 aa29.14■■■□□ 2.26
R3HDM4-208ENST00000626716 HOXC8P31273 242 aa29.14■■■□□ 2.26
R3HDM4-208ENST00000626716 KIF5BP33176 963 aa29.14■■■□□ 2.26
R3HDM4-208ENST00000626716 METTL7BQ6UX53 244 aa29.14■■■□□ 2.26
R3HDM4-208ENST00000626716 CYFIP1Q7L576 1253 aa29.14■■■□□ 2.26
R3HDM4-208ENST00000626716 DBF4BQ8NFT6 615 aa29.14■■■□□ 2.26
R3HDM4-208ENST00000626716 CTCFLQ8NI51 663 aaPredicted RBP29.14■■■□□ 2.26
R3HDM4-208ENST00000626716 RRP36Q96EU6 259 aaKnown RBP29.14■■■□□ 2.26
R3HDM4-208ENST00000626716 NECAB3Q96P71 396 aaPredicted RBP29.14■■■□□ 2.26
R3HDM4-208ENST00000626716 TGS1Q96RS0 853 aaKnown RBP29.14■■■□□ 2.26
R3HDM4-208ENST00000626716 SPZ1Q9BXG8 430 aa29.14■■■□□ 2.26
R3HDM4-208ENST00000626716 RNPEPQ9H4A4 650 aa29.14■■■□□ 2.26
R3HDM4-208ENST00000626716 FIBPO43427 364 aa29.13■■■□□ 2.25
R3HDM4-208ENST00000626716 ERVK-21P61565 698 aa29.13■■■□□ 2.25
R3HDM4-208ENST00000626716 FAM117BQ6P1L5 589 aa29.13■■■□□ 2.25
R3HDM4-208ENST00000626716 ZNF654Q8IZM8 581 aa29.13■■■□□ 2.25
R3HDM4-208ENST00000626716 SMARCC2Q8TAQ2 1214 aa29.13■■■□□ 2.25
R3HDM4-208ENST00000626716 CUL5Q93034 780 aa29.13■■■□□ 2.25
R3HDM4-208ENST00000626716 HLA-CQ95604 372 aa29.13■■■□□ 2.25
R3HDM4-208ENST00000626716 LY9Q9HBG7 655 aa29.13■■■□□ 2.25
R3HDM4-208ENST00000626716 RBM8AQ9Y5S9 174 aaKnown RBP29.13■■■□□ 2.25
R3HDM4-208ENST00000626716 LINC01553A4QN01 128 aa29.12■■■□□ 2.25
R3HDM4-208ENST00000626716 TREHO43280 583 aa29.12■■■□□ 2.25
R3HDM4-208ENST00000626716 DDAH1O94760 285 aa29.12■■■□□ 2.25
R3HDM4-208ENST00000626716 SEMA3FQ13275 785 aa29.12■■■□□ 2.25
R3HDM4-208ENST00000626716 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.12■■■□□ 2.25
R3HDM4-208ENST00000626716 GPR20Q99678 358 aa29.12■■■□□ 2.25
R3HDM4-208ENST00000626716 LZTS2Q9BRK4 669 aa29.12■■■□□ 2.25
R3HDM4-208ENST00000626716 MTA3Q9BTC8 594 aa29.12■■■□□ 2.25
R3HDM4-208ENST00000626716 SUGCTQ9HAC7 445 aa29.12■■■□□ 2.25
R3HDM4-208ENST00000626716 INSL6Q9Y581 213 aa29.12■■■□□ 2.25
R3HDM4-208ENST00000626716 DOCK5Q9H7D0 1870 aa29.12■■■□□ 2.25
R3HDM4-208ENST00000626716 KAT6AQ92794 2004 aa29.11■■■□□ 2.25
R3HDM4-208ENST00000626716 BRWD1Q9NSI6 2320 aa29.11■■■□□ 2.25
R3HDM4-208ENST00000626716 RBAK-RBAKDNI3L0D1 243 aa29.11■■■□□ 2.25
R3HDM4-208ENST00000626716 GNAT1P11488 350 aa29.11■■■□□ 2.25
R3HDM4-208ENST00000626716 PLEKHG4Q58EX7 1191 aa29.11■■■□□ 2.25
R3HDM4-208ENST00000626716 XRRA1Q6P2D8 792 aa29.11■■■□□ 2.25
R3HDM4-208ENST00000626716 USP17L6PQ6QN14 398 aa29.11■■■□□ 2.25
R3HDM4-208ENST00000626716 CASC1Q6TDU7 716 aa29.11■■■□□ 2.25
R3HDM4-208ENST00000626716 GDPD5Q8WTR4 605 aa29.11■■■□□ 2.25
R3HDM4-208ENST00000626716 MYL10Q9BUA6 226 aa29.11■■■□□ 2.25
R3HDM4-208ENST00000626716 MTUS1Q9ULD2 1270 aa29.11■■■□□ 2.25
R3HDM4-208ENST00000626716 MICAL3Q7RTP6 2002 aa29.11■■■□□ 2.25
R3HDM4-208ENST00000626716 PIK3CDO00329 1044 aa29.1■■■□□ 2.25
R3HDM4-208ENST00000626716 MEIS2O14770 477 aa29.1■■■□□ 2.25
R3HDM4-208ENST00000626716 AMHP03971 560 aa29.1■■■□□ 2.25
R3HDM4-208ENST00000626716 MKRN4PQ13434 485 aaPredicted RBP29.1■■■□□ 2.25
R3HDM4-208ENST00000626716 PCNX4Q63HM2 1172 aa29.1■■■□□ 2.25
R3HDM4-208ENST00000626716 TMTC2Q8N394 836 aa29.1■■■□□ 2.25
R3HDM4-208ENST00000626716 SENP7Q9BQF6 1050 aa29.1■■■□□ 2.25
R3HDM4-208ENST00000626716 SEC63Q9UGP8 760 aaKnown RBP29.1■■■□□ 2.25
R3HDM4-208ENST00000626716 CAND2O75155 1236 aa29.09■■■□□ 2.25
R3HDM4-208ENST00000626716 COL9A1P20849 921 aa29.09■■■□□ 2.25
R3HDM4-208ENST00000626716 GNAQP50148 359 aa29.09■■■□□ 2.25
R3HDM4-208ENST00000626716 SETD4Q9NVD3 440 aa29.09■■■□□ 2.25
R3HDM4-208ENST00000626716 COL4A4P53420 1690 aaPredicted RBP29.09■■■□□ 2.25
R3HDM4-208ENST00000626716 PRC1O43663 620 aa29.08■■■□□ 2.25
R3HDM4-208ENST00000626716 MCM5P33992 734 aa29.08■■■□□ 2.25
R3HDM4-208ENST00000626716 MYOCDQ8IZQ8 938 aa29.08■■■□□ 2.25
R3HDM4-208ENST00000626716 SEPT8Q92599 483 aa29.08■■■□□ 2.25
R3HDM4-208ENST00000626716 ZNF215Q9UL58 517 aaPredicted RBP29.08■■■□□ 2.25
R3HDM4-208ENST00000626716 SIP14410 1827 aa29.07■■■□□ 2.24
R3HDM4-208ENST00000626716 IRX6P78412 446 aaPredicted RBP29.07■■■□□ 2.24
R3HDM4-208ENST00000626716 UTP14CQ5TAP6 766 aaKnown RBP29.07■■■□□ 2.24
R3HDM4-208ENST00000626716 NFXL1Q6ZNB6 911 aa29.07■■■□□ 2.24
R3HDM4-208ENST00000626716 NLRX1Q86UT6 975 aa29.07■■■□□ 2.24
R3HDM4-208ENST00000626716 SRBD1Q8N5C6 995 aaKnown RBP29.07■■■□□ 2.24
R3HDM4-208ENST00000626716 GIMAP8Q8ND71 665 aaPredicted RBP29.07■■■□□ 2.24
R3HDM4-208ENST00000626716 CCDC69A6NI79 296 aa29.06■■■□□ 2.24
R3HDM4-208ENST00000626716 HTRA4P83105 476 aaPredicted RBP29.06■■■□□ 2.24
R3HDM4-208ENST00000626716 TRIM50Q86XT4 487 aa29.06■■■□□ 2.24
R3HDM4-208ENST00000626716 TMEM87BQ96K49 555 aa29.06■■■□□ 2.24
R3HDM4-208ENST00000626716 TELO2Q9Y4R8 837 aa29.06■■■□□ 2.24
R3HDM4-208ENST00000626716 SH2B2O14492 632 aaPredicted RBP29.05■■■□□ 2.24
R3HDM4-208ENST00000626716 PLEKHA8P1O95397 391 aa29.05■■■□□ 2.24
R3HDM4-208ENST00000626716 CTSHP09668 335 aa29.05■■■□□ 2.24
R3HDM4-208ENST00000626716 SP4Q02446 784 aa29.05■■■□□ 2.24
R3HDM4-208ENST00000626716 PSTPIP2Q9H939 334 aa29.05■■■□□ 2.24
R3HDM4-208ENST00000626716 CALM1P0DP23 149 aa29.04■■■□□ 2.24
R3HDM4-208ENST00000626716 CALM2P0DP24 149 aa29.04■■■□□ 2.24
R3HDM4-208ENST00000626716 CALM3P0DP25 149 aa29.04■■■□□ 2.24
R3HDM4-208ENST00000626716 ADAM17P78536 824 aa29.04■■■□□ 2.24
R3HDM4-208ENST00000626716 OSBPL7Q9BZF2 842 aa29.04■■■□□ 2.24
R3HDM4-208ENST00000626716 LSG1Q9H089 658 aaKnown RBP29.04■■■□□ 2.24
R3HDM4-208ENST00000626716 LIFRP42702 1097 aa29.03■■■□□ 2.24
R3HDM4-208ENST00000626716 ARHGAP4P98171 946 aa29.03■■■□□ 2.24
R3HDM4-208ENST00000626716 CMTR1Q8N1G2 835 aaKnown RBP29.03■■■□□ 2.24
R3HDM4-208ENST00000626716 FBXO22Q8NEZ5 403 aa29.03■■■□□ 2.24
R3HDM4-208ENST00000626716 SP7Q8TDD2 431 aaPredicted RBP29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms