RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 MESP2Q0VG99 397 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 GRB10Q13322 594 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 PICALMQ13492 652 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 GBX1Q14549 363 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 ZNF460Q14592 562 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 GNPTABQ3T906 1256 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 SV2CQ496J9 727 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 TOGARAM2Q6ZUX3 1019 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 FGD2Q7Z6J4 655 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 ZSWIM9Q86XI8 627 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 PHACTR4Q8IZ21 702 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 CBARPQ8N350 705 aaPredicted RBP4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 PAF1Q8N7H5 531 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 GSTCDQ8NEC7 633 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 PPP1R16BQ96T49 567 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 TTC1Q99614 292 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 FOXQ1Q9C009 403 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 TMX4Q9H1E5 349 aaPredicted RBP4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 IFT22Q9H7X7 185 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 LUZP4Q9P127 313 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 SUSD2Q9UGT4 822 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 KIAA1107Q9UPP5 1409 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 FAM135AQ9P2D6 1515 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 PREX2Q70Z35 1606 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 RNF17Q9BXT8 1623 aaKnown RBP4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 IQGAP1P46940 1657 aa4.86□□□□□ -1.63
IGHV3-29-201ENST00000604817 CHURC1-FNTBB4DL54 471 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 APAF1O14727 1248 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 ZEB2O60315 1214 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 KPNA6O60684 536 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 RNGTTO60942 597 aaKnown RBP4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 ASLP04424 464 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 MYL3P08590 195 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 FAM163BP0C2L3 166 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 U2AF1L5P0DN76 240 aaPredicted RBP4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 FGFR1P11362 822 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 GRIA2P42262 883 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 TRAPPC10P48553 1259 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 OXCT1P55809 520 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 ZNF280AP59817 542 aaPredicted RBP4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 U2AF1Q01081 240 aaKnown RBP eCLIP4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 GALEQ14376 348 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 SLBPQ14493 270 aaKnown RBP eCLIP4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 PTPN21Q16825 1174 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 INAVAQ3KP66 663 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 MINDY4Q4G0A6 757 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 BRAPQ7Z569 592 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 ASB11Q8WXH4 323 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 OSBP2Q969R2 916 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 ISL2Q96A47 359 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 RUNDC1Q96C34 613 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 SCLYQ96I15 445 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 COX4I2Q96KJ9 171 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 ELAC2Q9BQ52 826 aaKnown RBP4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 PAGR1Q9BTK6 254 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 SLC52A2Q9HAB3 445 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 NGRNQ9NPE2 291 aaKnown RBP4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 CRTAC1Q9NQ79 661 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 JADE2Q9NQC1 790 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 CFDP1Q9UEE9 299 aaPredicted RBP4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 PUF60Q9UHX1 559 aaKnown RBP4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 PNMA8BQ9ULN7 279 aaPredicted RBP4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 LUC7L2Q9Y383 392 aaKnown RBP4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 DHX29Q7Z478 1369 aaKnown RBP4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 EEA1Q15075 1411 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 NLRP1Q9C000 1473 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 ATP7AQ04656 1500 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 PLXNC1O60486 1568 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 UGGT1Q9NYU2 1555 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 CDC42BPAQ5VT25 1732 aa4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 XIRP1Q702N8 1843 aaKnown RBP4.85□□□□□ -1.63
IGHV3-29-201ENST00000604817 CFAP65Q6ZU64 1925 aaKnown RBP4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 ADGBQ8N7X0 1667 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 SYNMO15061 1565 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 PZPP20742 1482 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 PLEKHH2Q8IVE3 1493 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 JCADQ9P266 1359 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 FAM86C2PA6NEL3 165 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 RASSF10A6NK89 507 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 K7ESF4 209 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 FZD9O00144 591 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 PRODHO43272 600 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 ZNF500O60304 480 aaPredicted RBP4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 CLEC3AO75596 197 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 PRKD3O94806 890 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 TSPAN15O95858 294 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 PABPC1P11940 636 aaKnown RBP4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 GBP1P32455 592 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 HALP42357 657 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 RAP1GAPP47736 663 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 PMS1P54277 932 aaKnown RBP4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 RNF4P78317 190 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 SIM2Q14190 667 aaPredicted RBP4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 GRM3Q14832 879 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 KCNMB1Q16558 191 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 ABCB5Q2M3G0 1257 aa4.84□□□□□ -1.63
IGHV3-29-201ENST00000604817 COBLL1Q53SF7 1204 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms