RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 AEBP2Q6ZN18 517 aaPredicted RBP18.77■□□□□ 0.6
IGHV3-29-201ENST00000604817 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
IGHV3-29-201ENST00000604817 SENP3Q9H4L4 574 aaPredicted RBP16.15■□□□□ 0.18
IGHV3-29-201ENST00000604817 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
IGHV3-29-201ENST00000604817 FOXD1Q16676 465 aa14.98□□□□□ -0.01
IGHV3-29-201ENST00000604817 PLPPR3Q6T4P5 718 aa14.23□□□□□ -0.13
IGHV3-29-201ENST00000604817 MSH5O43196 834 aa14.16□□□□□ -0.14
IGHV3-29-201ENST00000604817 PIAS4Q8N2W9 510 aaPredicted RBP14.01□□□□□ -0.17
IGHV3-29-201ENST00000604817 POTEDQ86YR6 584 aa13.89□□□□□ -0.19
IGHV3-29-201ENST00000604817 PPP6R1Q9UPN7 881 aa13.89□□□□□ -0.19
IGHV3-29-201ENST00000604817 ADRA2BP18089 450 aa13.85□□□□□ -0.19
IGHV3-29-201ENST00000604817 SCAF1Q9H7N4 1312 aaKnown RBP12.82□□□□□ -0.36
IGHV3-29-201ENST00000604817 DMRT2Q9Y5R5 561 aa12.76□□□□□ -0.37
IGHV3-29-201ENST00000604817 MAPK8IP2Q13387 824 aaPredicted RBP12.73□□□□□ -0.37
IGHV3-29-201ENST00000604817 PPP4R3CPQ6ZMV5 832 aa12.41□□□□□ -0.42
IGHV3-29-201ENST00000604817 HOXD11P31277 338 aaPredicted RBP12.26□□□□□ -0.45
IGHV3-29-201ENST00000604817 CNKSR2Q8WXI2 1034 aa12.25□□□□□ -0.45
IGHV3-29-201ENST00000604817 DCAF8L1A6NGE4 600 aa12.22□□□□□ -0.45
IGHV3-29-201ENST00000604817 CACNB1Q02641 598 aaPredicted RBP12.16□□□□□ -0.46
IGHV3-29-201ENST00000604817 RNF216Q9NWF9 866 aaPredicted RBP12.16□□□□□ -0.46
IGHV3-29-201ENST00000604817 RNF39Q9H2S5 420 aa12.02□□□□□ -0.49
IGHV3-29-201ENST00000604817 NCBP3Q53F19 620 aaKnown RBP11.99□□□□□ -0.49
IGHV3-29-201ENST00000604817 DNAJC5BQ9UF47 199 aa11.94□□□□□ -0.5
IGHV3-29-201ENST00000604817 C1QBPQ07021 282 aaKnown RBP11.89□□□□□ -0.51
IGHV3-29-201ENST00000604817 NPM3O75607 178 aaKnown RBP11.71□□□□□ -0.53
IGHV3-29-201ENST00000604817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.68□□□□□ -0.54
IGHV3-29-201ENST00000604817 U3KPZ7 1027 aaPredicted RBP11.39□□□□□ -0.59
IGHV3-29-201ENST00000604817 KCNA4P22459 653 aa11.38□□□□□ -0.59
IGHV3-29-201ENST00000604817 CAPN15O75808 1086 aa11.26□□□□□ -0.61
IGHV3-29-201ENST00000604817 SPINK5Q9NQ38 1064 aaPredicted RBP11.22□□□□□ -0.61
IGHV3-29-201ENST00000604817 DSG3P32926 999 aa11.21□□□□□ -0.61
IGHV3-29-201ENST00000604817 APLP2Q06481 763 aa11.21□□□□□ -0.61
IGHV3-29-201ENST00000604817 SLC4A2P04920 1241 aa11.19□□□□□ -0.62
IGHV3-29-201ENST00000604817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.16□□□□□ -0.62
IGHV3-29-201ENST00000604817 HNRNPUL2Q1KMD3 747 aaKnown RBP11.16□□□□□ -0.62
IGHV3-29-201ENST00000604817 ZNF219Q9P2Y4 722 aaPredicted RBP11.09□□□□□ -0.63
IGHV3-29-201ENST00000604817 SAMD1Q6SPF0 538 aaPredicted RBP11.05□□□□□ -0.64
IGHV3-29-201ENST00000604817 TRHP20396 242 aaPredicted RBP11.04□□□□□ -0.64
IGHV3-29-201ENST00000604817 ABCB7O75027 752 aa10.95□□□□□ -0.66
IGHV3-29-201ENST00000604817 MYCNP04198 464 aaPredicted RBP10.9□□□□□ -0.66
IGHV3-29-201ENST00000604817 POTEHQ6S545 545 aa10.9□□□□□ -0.66
IGHV3-29-201ENST00000604817 RBM42Q9BTD8 480 aaKnown RBP10.79□□□□□ -0.68
IGHV3-29-201ENST00000604817 SLC4A1APQ9BWU0 796 aaKnown RBP10.77□□□□□ -0.69
IGHV3-29-201ENST00000604817 POLA2Q14181 598 aa10.72□□□□□ -0.69
IGHV3-29-201ENST00000604817 FOXD4L1Q9NU39 408 aa10.72□□□□□ -0.69
IGHV3-29-201ENST00000604817 ZBTB12Q9Y330 459 aaPredicted RBP10.61□□□□□ -0.71
IGHV3-29-201ENST00000604817 ATF5Q9Y2D1 282 aaPredicted RBP10.54□□□□□ -0.72
IGHV3-29-201ENST00000604817 CHRDL2Q6WN34 429 aa10.52□□□□□ -0.73
IGHV3-29-201ENST00000604817 AKT1S1Q96B36 256 aa10.49□□□□□ -0.73
IGHV3-29-201ENST00000604817 ATXN8OSP0DMR3 200 aa10.45□□□□□ -0.74
IGHV3-29-201ENST00000604817 ZBTB22O15209 634 aa10.42□□□□□ -0.74
IGHV3-29-201ENST00000604817 OSCARQ8IYS5 282 aa10.38□□□□□ -0.75
IGHV3-29-201ENST00000604817 REM2Q8IYK8 340 aaPredicted RBP10.34□□□□□ -0.75
IGHV3-29-201ENST00000604817 FBLN2P98095 1184 aa10.27□□□□□ -0.77
IGHV3-29-201ENST00000604817 SPDYE2BA6NHP3 402 aa10.23□□□□□ -0.77
IGHV3-29-201ENST00000604817 SPDYE6P0CI01 402 aa10.23□□□□□ -0.77
IGHV3-29-201ENST00000604817 SPDYE2Q495Y8 402 aa10.23□□□□□ -0.77
IGHV3-29-201ENST00000604817 PIP4P2Q8N4L2 257 aa10.23□□□□□ -0.77
IGHV3-29-201ENST00000604817 PITPNM1O00562 1244 aa10.22□□□□□ -0.77
IGHV3-29-201ENST00000604817 SP7Q8TDD2 431 aaPredicted RBP10.18□□□□□ -0.78
IGHV3-29-201ENST00000604817 FXR2P51116 673 aaKnown RBP eCLIP10.17□□□□□ -0.78
IGHV3-29-201ENST00000604817 HAX1O00165 279 aa10.09□□□□□ -0.79
IGHV3-29-201ENST00000604817 MKRN4PQ13434 485 aaPredicted RBP10.07□□□□□ -0.8
IGHV3-29-201ENST00000604817 SPDYE1Q8NFV5 336 aaPredicted RBP10.07□□□□□ -0.8
IGHV3-29-201ENST00000604817 ZNF692Q9BU19 519 aaPredicted RBP10.06□□□□□ -0.8
IGHV3-29-201ENST00000604817 SSUH2Q9Y2M2 353 aa10.05□□□□□ -0.8
IGHV3-29-201ENST00000604817 CLEC11AQ9Y240 323 aa10.01□□□□□ -0.81
IGHV3-29-201ENST00000604817 PRKAR2AP13861 404 aaKnown RBP9.97□□□□□ -0.81
IGHV3-29-201ENST00000604817 EHMT2Q96KQ7 1210 aa9.96□□□□□ -0.82
IGHV3-29-201ENST00000604817 PABPN1Q86U42 306 aaKnown RBP eCLIP9.89□□□□□ -0.83
IGHV3-29-201ENST00000604817 CSRNP3Q8WYN3 585 aa9.88□□□□□ -0.83
IGHV3-29-201ENST00000604817 PRR29P0C7W0 189 aa9.86□□□□□ -0.83
IGHV3-29-201ENST00000604817 EVX2Q03828 476 aa9.86□□□□□ -0.83
IGHV3-29-201ENST00000604817 C19orf67A6NJJ6 358 aa9.85□□□□□ -0.83
IGHV3-29-201ENST00000604817 CHADLQ6NUI6 762 aa9.79□□□□□ -0.84
IGHV3-29-201ENST00000604817 GABBR2O75899 941 aa9.72□□□□□ -0.85
IGHV3-29-201ENST00000604817 STAG3Q9UJ98 1225 aa9.69□□□□□ -0.86
IGHV3-29-201ENST00000604817 FARP1Q9Y4F1 1045 aaPredicted RBP9.69□□□□□ -0.86
IGHV3-29-201ENST00000604817 CLCN6P51797 869 aa9.67□□□□□ -0.86
IGHV3-29-201ENST00000604817 CD44P16070 742 aaKnown RBP9.65□□□□□ -0.86
IGHV3-29-201ENST00000604817 SPDYE4A6NLX3 237 aa9.6□□□□□ -0.87
IGHV3-29-201ENST00000604817 CREBZFQ9NS37 354 aa9.55□□□□□ -0.88
IGHV3-29-201ENST00000604817 LHX8Q68G74 356 aa9.54□□□□□ -0.88
IGHV3-29-201ENST00000604817 ZNF579Q8NAF0 562 aaKnown RBP9.51□□□□□ -0.89
IGHV3-29-201ENST00000604817 ZRANB1Q9UGI0 708 aa9.5□□□□□ -0.89
IGHV3-29-201ENST00000604817 PAK3O75914 559 aaPredicted RBP9.47□□□□□ -0.89
IGHV3-29-201ENST00000604817 DCBLD2Q96PD2 775 aa9.47□□□□□ -0.89
IGHV3-29-201ENST00000604817 NPM1P06748 294 aaKnown RBP eCLIP9.46□□□□□ -0.9
IGHV3-29-201ENST00000604817 POTEIP0CG38 1075 aa9.46□□□□□ -0.9
IGHV3-29-201ENST00000604817 MNX1P50219 401 aaPredicted RBP9.36□□□□□ -0.91
IGHV3-29-201ENST00000604817 PROM2Q8N271 834 aa9.36□□□□□ -0.91
IGHV3-29-201ENST00000604817 GALR2O43603 387 aaPredicted RBP9.35□□□□□ -0.91
IGHV3-29-201ENST00000604817 PHF12Q96QT6 1004 aa9.32□□□□□ -0.92
IGHV3-29-201ENST00000604817 PLEKHG5O94827 1062 aa9.27□□□□□ -0.93
IGHV3-29-201ENST00000604817 MS4A3Q96HJ5 214 aa9.21□□□□□ -0.94
IGHV3-29-201ENST00000604817 ASTLQ6HA08 431 aaPredicted RBP9.2□□□□□ -0.94
IGHV3-29-201ENST00000604817 TSPYL2Q9H2G4 693 aaPredicted RBP9.19□□□□□ -0.94
IGHV3-29-201ENST00000604817 MIER1Q8N108 512 aa9.18□□□□□ -0.94
IGHV3-29-201ENST00000604817 CCDC61Q9Y6R9 512 aa9.18□□□□□ -0.94
IGHV3-29-201ENST00000604817 SLC39A7Q92504 469 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms