RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 GNPTABQ3T906 1256 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 EPC2Q52LR7 807 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 KCNV1Q6PIU1 500 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 ZNF589Q86UQ0 364 aaPredicted RBP6.01□□□□□ -1.45
VRK3-226ENST00000602029 BANK1Q8NDB2 785 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 DBF4BQ8NFT6 615 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 PPTC7Q8NI37 304 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 DHX38Q92620 1227 aaKnown RBP6.01□□□□□ -1.45
VRK3-226ENST00000602029 CUL5Q93034 780 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 ZSCAN10Q96SZ4 725 aaPredicted RBP6.01□□□□□ -1.45
VRK3-226ENST00000602029 AMNQ9BXJ7 453 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 UPF3BQ9BZI7 483 aaKnown RBP6.01□□□□□ -1.45
VRK3-226ENST00000602029 KRT23Q9C075 422 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 PXMP2Q9NR77 195 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 LMCD1Q9NZU5 365 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 PKD2L1Q9P0L9 805 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 DDX41Q9UJV9 622 aaKnown RBP6.01□□□□□ -1.45
VRK3-226ENST00000602029 ZNF215Q9UL58 517 aaPredicted RBP6.01□□□□□ -1.45
VRK3-226ENST00000602029 PCDHB15Q9Y5E8 787 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 PCDHA1Q9Y5I3 950 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 PKD1L2Q7Z442 2459 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 DMXL1Q9Y485 3027 aa6.01□□□□□ -1.45
VRK3-226ENST00000602029 ATG2AQ2TAZ0 1938 aa6□□□□□ -1.45
VRK3-226ENST00000602029 KLRF2D3W0D1 207 aa6□□□□□ -1.45
VRK3-226ENST00000602029 H3BRB1 525 aa6□□□□□ -1.45
VRK3-226ENST00000602029 RBAK-RBAKDNI3L0D1 243 aa6□□□□□ -1.45
VRK3-226ENST00000602029 FOXP2O15409 715 aa6□□□□□ -1.45
VRK3-226ENST00000602029 DCXO43602 365 aa6□□□□□ -1.45
VRK3-226ENST00000602029 ST18O60284 1047 aa6□□□□□ -1.45
VRK3-226ENST00000602029 F2P00734 622 aa6□□□□□ -1.45
VRK3-226ENST00000602029 SMIM10L2AP0DMW4 78 aa6□□□□□ -1.45
VRK3-226ENST00000602029 SMIM10L2BP0DMW5 78 aa6□□□□□ -1.45
VRK3-226ENST00000602029 UBA1P22314 1058 aaKnown RBP6□□□□□ -1.45
VRK3-226ENST00000602029 NDUFV1P49821 464 aa6□□□□□ -1.45
VRK3-226ENST00000602029 IGBP1P78318 339 aa6□□□□□ -1.45
VRK3-226ENST00000602029 TRAF1Q13077 416 aa6□□□□□ -1.45
VRK3-226ENST00000602029 LEXMQ3ZCV2 418 aa6□□□□□ -1.45
VRK3-226ENST00000602029 TCEAL5Q5H9L2 206 aa6□□□□□ -1.45
VRK3-226ENST00000602029 CELF3Q5SZQ8 465 aaKnown RBP6□□□□□ -1.45
VRK3-226ENST00000602029 SPOUT1Q5T280 376 aaKnown RBP6□□□□□ -1.45
VRK3-226ENST00000602029 CCDC62Q6P9F0 684 aa6□□□□□ -1.45
VRK3-226ENST00000602029 RALYLQ86SE5 291 aaKnown RBP6□□□□□ -1.45
VRK3-226ENST00000602029 RSPH3Q86UC2 560 aa6□□□□□ -1.45
VRK3-226ENST00000602029 SESTD1Q86VW0 696 aa6□□□□□ -1.45
VRK3-226ENST00000602029 DGKHQ86XP1 1220 aa6□□□□□ -1.45
VRK3-226ENST00000602029 FAM178BQ8IXR5 827 aa6□□□□□ -1.45
VRK3-226ENST00000602029 TMEM192Q8IY95 271 aa6□□□□□ -1.45
VRK3-226ENST00000602029 FIBCD1Q8N539 461 aa6□□□□□ -1.45
VRK3-226ENST00000602029 RGS22Q8NE09 1264 aa6□□□□□ -1.45
VRK3-226ENST00000602029 PRSS33Q8NF86 280 aa6□□□□□ -1.45
VRK3-226ENST00000602029 TET1Q8NFU7 2136 aa6□□□□□ -1.45
VRK3-226ENST00000602029 SMARCC2Q8TAQ2 1214 aa6□□□□□ -1.45
VRK3-226ENST00000602029 KAT2BQ92831 832 aa6□□□□□ -1.45
VRK3-226ENST00000602029 PPP2R3CQ969Q6 453 aa6□□□□□ -1.45
VRK3-226ENST00000602029 VWCEQ96DN2 955 aa6□□□□□ -1.45
VRK3-226ENST00000602029 MRPL38Q96DV4 380 aaKnown RBP6□□□□□ -1.45
VRK3-226ENST00000602029 IL17RAQ96F46 866 aa6□□□□□ -1.45
VRK3-226ENST00000602029 SAMD11Q96NU1 681 aa6□□□□□ -1.45
VRK3-226ENST00000602029 NSUN3Q9H649 340 aaKnown RBP6□□□□□ -1.45
VRK3-226ENST00000602029 TUT1Q9H6E5 874 aaKnown RBP6□□□□□ -1.45
VRK3-226ENST00000602029 CNNM2Q9H8M5 875 aa6□□□□□ -1.45
VRK3-226ENST00000602029 RTEL1Q9NZ71 1219 aa6□□□□□ -1.45
VRK3-226ENST00000602029 COL20A1Q9P218 1284 aa6□□□□□ -1.45
VRK3-226ENST00000602029 MYO7AQ13402 2215 aa6□□□□□ -1.45
VRK3-226ENST00000602029 MAP1BP46821 2468 aaKnown RBP6□□□□□ -1.45
VRK3-226ENST00000602029 WDR87Q6ZQQ6 2873 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 COL4A6Q14031 1691 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 M0QZ92 97 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 HIP1O00291 1037 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 IFIT3O14879 490 aaKnown RBP5.99□□□□□ -1.45
VRK3-226ENST00000602029 ZBTB5O15062 677 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 TREHO43280 583 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 PPFIA4O75335 1185 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 CXCL10P02778 98 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 LGALS2P05162 132 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 SNHG28P0DPA3 235 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 GHRP10912 638 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 SDSP20132 328 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 MARK3P27448 753 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 CA8P35219 290 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 MKRN4PQ13434 485 aaPredicted RBP5.99□□□□□ -1.45
VRK3-226ENST00000602029 BTG3Q14201 252 aaPredicted RBP5.99□□□□□ -1.45
VRK3-226ENST00000602029 SART3Q15020 963 aaKnown RBP5.99□□□□□ -1.45
VRK3-226ENST00000602029 PGM5Q15124 567 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 TCTN1Q2MV58 587 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 HSDL1Q3SXM5 330 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 CYFIP1Q7L576 1253 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 ZBTB33Q86T24 672 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 RPAINQ86UA6 219 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 TRIM50Q86XT4 487 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 ENAHQ8N8S7 591 aaPredicted RBP5.99□□□□□ -1.45
VRK3-226ENST00000602029 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.99□□□□□ -1.45
VRK3-226ENST00000602029 MICAL1Q8TDZ2 1067 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 GLG1Q92896 1179 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 WNT8BQ93098 351 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 POP1Q99575 1024 aaKnown RBP5.99□□□□□ -1.45
VRK3-226ENST00000602029 PDCD2LQ9BRP1 358 aa5.99□□□□□ -1.45
VRK3-226ENST00000602029 C11orf84Q9BUA3 381 aaPredicted RBP5.99□□□□□ -1.45
VRK3-226ENST00000602029 RWDD1Q9H446 243 aaPredicted RBP5.99□□□□□ -1.45
VRK3-226ENST00000602029 JMJD4Q9H9V9 463 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms