RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 IFIT3O14879 490 aaKnown RBP9.64□□□□□ -0.87
CCDC9-206ENST00000601154 CSPG5O95196 566 aa9.64□□□□□ -0.87
CCDC9-206ENST00000601154 IL9P15248 144 aa9.64□□□□□ -0.87
CCDC9-206ENST00000601154 SSTR3P32745 418 aaPredicted RBP9.64□□□□□ -0.87
CCDC9-206ENST00000601154 TRDNQ13061 729 aa9.64□□□□□ -0.87
CCDC9-206ENST00000601154 GRM4Q14833 912 aa9.64□□□□□ -0.87
CCDC9-206ENST00000601154 UTP14CQ5TAP6 766 aaKnown RBP9.64□□□□□ -0.87
CCDC9-206ENST00000601154 CYFIP1Q7L576 1253 aa9.64□□□□□ -0.87
CCDC9-206ENST00000601154 SEPT8Q92599 483 aa9.64□□□□□ -0.87
CCDC9-206ENST00000601154 YME1L1Q96TA2 773 aa9.64□□□□□ -0.87
CCDC9-206ENST00000601154 RNPEPQ9H4A4 650 aa9.64□□□□□ -0.87
CCDC9-206ENST00000601154 C11orf16Q9NQ32 467 aa9.64□□□□□ -0.87
CCDC9-206ENST00000601154 SETD4Q9NVD3 440 aa9.64□□□□□ -0.87
CCDC9-206ENST00000601154 SUPT16HQ9Y5B9 1047 aaKnown RBP9.64□□□□□ -0.87
CCDC9-206ENST00000601154 TAF6LQ9Y6J9 622 aa9.64□□□□□ -0.87
CCDC9-206ENST00000601154 NCOR1O75376 2440 aa9.63□□□□□ -0.87
CCDC9-206ENST00000601154 ERICH2A1L162 156 aa9.63□□□□□ -0.87
CCDC9-206ENST00000601154 H3BQ06 376 aaPredicted RBP9.63□□□□□ -0.87
CCDC9-206ENST00000601154 CYTH3O43739 400 aa9.63□□□□□ -0.87
CCDC9-206ENST00000601154 MRPS9P82933 396 aaKnown RBP9.63□□□□□ -0.87
CCDC9-206ENST00000601154 HTRA4P83105 476 aaPredicted RBP9.63□□□□□ -0.87
CCDC9-206ENST00000601154 ARHGAP4P98171 946 aa9.63□□□□□ -0.87
CCDC9-206ENST00000601154 MKRN4PQ13434 485 aaPredicted RBP9.63□□□□□ -0.87
CCDC9-206ENST00000601154 GNPTABQ3T906 1256 aa9.63□□□□□ -0.87
CCDC9-206ENST00000601154 EPC2Q52LR7 807 aa9.63□□□□□ -0.87
CCDC9-206ENST00000601154 PLEKHG4Q58EX7 1191 aa9.63□□□□□ -0.87
CCDC9-206ENST00000601154 PTCRAQ6ISU1 281 aaPredicted RBP9.63□□□□□ -0.87
CCDC9-206ENST00000601154 RALYLQ86SE5 291 aaKnown RBP9.63□□□□□ -0.87
CCDC9-206ENST00000601154 GJD3Q8N144 294 aa9.63□□□□□ -0.87
CCDC9-206ENST00000601154 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.63□□□□□ -0.87
CCDC9-206ENST00000601154 IFIH1Q9BYX4 1025 aaKnown RBP9.63□□□□□ -0.87
CCDC9-206ENST00000601154 MAP3K20Q9NYL2 800 aaKnown RBP9.63□□□□□ -0.87
CCDC9-206ENST00000601154 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.62□□□□□ -0.87
CCDC9-206ENST00000601154 PNMA6FA0A0J9YX94 578 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.62□□□□□ -0.87
CCDC9-206ENST00000601154 CYP21A2P08686 494 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 TGFB3P10600 412 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 GSPT1P15170 499 aaKnown RBP9.62□□□□□ -0.87
CCDC9-206ENST00000601154 PTH1RQ03431 593 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 TRAF1Q13077 416 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 SEMA3FQ13275 785 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 GPM6BQ13491 265 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 NEDD9Q14511 834 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 WTAPQ15007 396 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 PTPROQ16827 1216 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 LEXMQ3ZCV2 418 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 TCEAL5Q5H9L2 206 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 METTL7BQ6UX53 244 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 SP7Q8TDD2 431 aaPredicted RBP9.62□□□□□ -0.87
CCDC9-206ENST00000601154 MRPL38Q96DV4 380 aaKnown RBP9.62□□□□□ -0.87
CCDC9-206ENST00000601154 INPP4AQ96PE3 977 aaPredicted RBP9.62□□□□□ -0.87
CCDC9-206ENST00000601154 GPR20Q99678 358 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 MYL10Q9BUA6 226 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 RIOX1Q9H6W3 641 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 TRIP12Q14669 1992 aaPredicted RBP9.62□□□□□ -0.87
CCDC9-206ENST00000601154 KIAA1217Q5T5P2 1943 aa9.62□□□□□ -0.87
CCDC9-206ENST00000601154 SPATA31C2B4DYI2 1134 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 E7EWF7 191 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 FIBPO43427 364 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 GHRP10912 638 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 MARK3P27448 753 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 PDE4AP27815 886 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 HOXC8P31273 242 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 CTNNB1P35222 781 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 TROAPQ12815 778 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 AAMPQ13685 434 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 SART3Q15020 963 aaKnown RBP9.61□□□□□ -0.87
CCDC9-206ENST00000601154 TIGD5Q53EQ6 642 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 USP17L6PQ6QN14 398 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 CATIPQ7Z7H3 387 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 FAM178BQ8IXR5 827 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 TMEM192Q8IY95 271 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 SAMD3Q8N6K7 520 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 BANK1Q8NDB2 785 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 SMARCC2Q8TAQ2 1214 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 LMBR1Q8WVP7 490 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 TOP1MTQ969P6 601 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 UIMC1Q96RL1 719 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 USP26Q9BXU7 913 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 PKD2L1Q9P0L9 805 aa9.61□□□□□ -0.87
CCDC9-206ENST00000601154 ZNF215Q9UL58 517 aaPredicted RBP9.61□□□□□ -0.87
CCDC9-206ENST00000601154 U3KPZ7 1027 aaPredicted RBP9.61□□□□□ -0.87
CCDC9-206ENST00000601154 FRMPD4Q14CM0 1322 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 GRXCR2A6NFK2 248 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 PI4K2BG5E9Z4 385 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 H3BNC9 293 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 GPR37L1O60883 481 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 CAND2O75155 1236 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 GNAT1P11488 350 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 ICAM3P32942 547 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 ANTXR2P58335 489 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 CLUL1Q15846 466 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 TTC22Q5TAA0 569 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 RUFY4Q6ZNE9 571 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 FIBCD1Q8N539 461 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 NCOA7Q8NI08 942 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 CUL5Q93034 780 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 SAMD11Q96NU1 681 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 CLDND1Q9NY35 253 aa9.6□□□□□ -0.87
CCDC9-206ENST00000601154 SIP14410 1827 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms