RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 FAM126BQ8IXS8 530 aa22.23■■□□□ 1.15
SHKBP1-221ENST00000599833 TBCKQ8TEA7 893 aa22.23■■□□□ 1.15
SHKBP1-221ENST00000599833 CDHR1Q96JP9 859 aa22.23■■□□□ 1.15
SHKBP1-221ENST00000599833 SPATA33Q96N06 139 aa22.23■■□□□ 1.15
SHKBP1-221ENST00000599833 C16orf70Q9BSU1 422 aa22.23■■□□□ 1.15
SHKBP1-221ENST00000599833 MTG1Q9BT17 334 aaPredicted RBP22.23■■□□□ 1.15
SHKBP1-221ENST00000599833 PDLIM7Q9NR12 457 aa22.23■■□□□ 1.15
SHKBP1-221ENST00000599833 ATP11BQ9Y2G3 1177 aa22.23■■□□□ 1.15
SHKBP1-221ENST00000599833 FAM205CA6NFA0 338 aa22.22■■□□□ 1.15
SHKBP1-221ENST00000599833 KPNA6O60684 536 aa22.22■■□□□ 1.15
SHKBP1-221ENST00000599833 F2P00734 622 aa22.22■■□□□ 1.15
SHKBP1-221ENST00000599833 CD4P01730 458 aa22.22■■□□□ 1.15
SHKBP1-221ENST00000599833 MMP1P03956 469 aa22.22■■□□□ 1.15
SHKBP1-221ENST00000599833 MCM2P49736 904 aa22.22■■□□□ 1.15
SHKBP1-221ENST00000599833 FAAP100Q0VG06 881 aa22.22■■□□□ 1.15
SHKBP1-221ENST00000599833 NR5A1Q13285 461 aa22.22■■□□□ 1.15
SHKBP1-221ENST00000599833 ITGA7Q13683 1181 aa22.22■■□□□ 1.15
SHKBP1-221ENST00000599833 SH3RF1Q7Z6J0 888 aa22.22■■□□□ 1.15
SHKBP1-221ENST00000599833 PPP1R13LQ8WUF5 828 aa22.22■■□□□ 1.15
SHKBP1-221ENST00000599833 TOX2Q96NM4 488 aa22.22■■□□□ 1.15
SHKBP1-221ENST00000599833 WDR81Q562E7 1941 aa22.21■■□□□ 1.15
SHKBP1-221ENST00000599833 CYP3A7-CYP3A51PA0A087WV96 503 aa22.21■■□□□ 1.15
SHKBP1-221ENST00000599833 GSTTP1A0A1W2PQM5 241 aa22.21■■□□□ 1.15
SHKBP1-221ENST00000599833 PPFIA4O75335 1185 aa22.21■■□□□ 1.15
SHKBP1-221ENST00000599833 CYP3A7P24462 503 aa22.21■■□□□ 1.15
SHKBP1-221ENST00000599833 USP11P51784 963 aa22.21■■□□□ 1.15
SHKBP1-221ENST00000599833 DGKDQ16760 1214 aa22.21■■□□□ 1.15
SHKBP1-221ENST00000599833 PRPF38BQ5VTL8 546 aaKnown RBP22.21■■□□□ 1.15
SHKBP1-221ENST00000599833 PRO3102Q9H379 93 aa22.21■■□□□ 1.15
SHKBP1-221ENST00000599833 MLXIPQ9HAP2 919 aa22.21■■□□□ 1.15
SHKBP1-221ENST00000599833 NFASCO94856 1347 aa22.21■■□□□ 1.15
SHKBP1-221ENST00000599833 TRIP12Q14669 1992 aaPredicted RBP22.2■■□□□ 1.14
SHKBP1-221ENST00000599833 TRIM43BA6NCK2 446 aa22.2■■□□□ 1.14
SHKBP1-221ENST00000599833 ZNF286BP0CG31 522 aa22.2■■□□□ 1.14
SHKBP1-221ENST00000599833 ITGB8P26012 769 aa22.2■■□□□ 1.14
SHKBP1-221ENST00000599833 FOSBP53539 338 aa22.2■■□□□ 1.14
SHKBP1-221ENST00000599833 HMGN5P82970 282 aaKnown RBP22.2■■□□□ 1.14
SHKBP1-221ENST00000599833 CUL4AQ13619 759 aa22.2■■□□□ 1.14
SHKBP1-221ENST00000599833 NBPF20Q3BBV1 942 aa22.2■■□□□ 1.14
SHKBP1-221ENST00000599833 KRT25Q7Z3Z0 450 aa22.2■■□□□ 1.14
SHKBP1-221ENST00000599833 PLA2G4DQ86XP0 818 aa22.2■■□□□ 1.14
SHKBP1-221ENST00000599833 TRIM43Q96BQ3 446 aaPredicted RBP22.2■■□□□ 1.14
SHKBP1-221ENST00000599833 CTAGE1Q96RT6 745 aa22.2■■□□□ 1.14
SHKBP1-221ENST00000599833 PKD2L1Q9P0L9 805 aa22.2■■□□□ 1.14
SHKBP1-221ENST00000599833 BTBD18B2RXH4 712 aa22.19■■□□□ 1.14
SHKBP1-221ENST00000599833 PQBP1O60828 265 aaKnown RBP22.19■■□□□ 1.14
SHKBP1-221ENST00000599833 TDP2O95551 362 aa22.19■■□□□ 1.14
SHKBP1-221ENST00000599833 SYN1P17600 705 aa22.19■■□□□ 1.14
SHKBP1-221ENST00000599833 XBP1P17861 261 aa22.19■■□□□ 1.14
SHKBP1-221ENST00000599833 HIC1Q14526 733 aa22.19■■□□□ 1.14
SHKBP1-221ENST00000599833 NONOQ15233 471 aaKnown RBP eCLIP22.19■■□□□ 1.14
SHKBP1-221ENST00000599833 INF2Q27J81 1249 aa22.19■■□□□ 1.14
SHKBP1-221ENST00000599833 BRDTQ58F21 947 aaPredicted RBP22.19■■□□□ 1.14
SHKBP1-221ENST00000599833 GIMAP8Q8ND71 665 aaPredicted RBP22.19■■□□□ 1.14
SHKBP1-221ENST00000599833 FBXO18Q8NFZ0 1043 aa22.19■■□□□ 1.14
SHKBP1-221ENST00000599833 PCYT2Q99447 389 aa22.19■■□□□ 1.14
SHKBP1-221ENST00000599833 TBX21Q9UL17 535 aa22.19■■□□□ 1.14
SHKBP1-221ENST00000599833 ZMYND8Q9ULU4 1186 aaPredicted RBP22.19■■□□□ 1.14
SHKBP1-221ENST00000599833 NR2E3Q9Y5X4 410 aa22.19■■□□□ 1.14
SHKBP1-221ENST00000599833 WNT7AO00755 349 aa22.18■■□□□ 1.14
SHKBP1-221ENST00000599833 MSH4O15457 936 aa22.18■■□□□ 1.14
SHKBP1-221ENST00000599833 CCNE2O96020 404 aa22.18■■□□□ 1.14
SHKBP1-221ENST00000599833 LGALS2P05162 132 aa22.18■■□□□ 1.14
SHKBP1-221ENST00000599833 KRT2P35908 639 aa22.18■■□□□ 1.14
SHKBP1-221ENST00000599833 Q4G0T1 1027 aa22.18■■□□□ 1.14
SHKBP1-221ENST00000599833 NFRKBQ6P4R8 1299 aa22.18■■□□□ 1.14
SHKBP1-221ENST00000599833 MOXD1Q6UVY6 613 aa22.18■■□□□ 1.14
SHKBP1-221ENST00000599833 SESTD1Q86VW0 696 aa22.18■■□□□ 1.14
SHKBP1-221ENST00000599833 DIS3L2Q8IYB7 885 aaKnown RBP22.18■■□□□ 1.14
SHKBP1-221ENST00000599833 KIAA0355O15063 1070 aa22.17■■□□□ 1.14
SHKBP1-221ENST00000599833 B4GALT4O60513 344 aa22.17■■□□□ 1.14
SHKBP1-221ENST00000599833 ATG7O95352 703 aa22.17■■□□□ 1.14
SHKBP1-221ENST00000599833 HOXC8P31273 242 aa22.17■■□□□ 1.14
SHKBP1-221ENST00000599833 ZNF76P36508 570 aa22.17■■□□□ 1.14
SHKBP1-221ENST00000599833 PSEN2P49810 448 aa22.17■■□□□ 1.14
SHKBP1-221ENST00000599833 SETQ01105 290 aaPredicted RBP22.17■■□□□ 1.14
SHKBP1-221ENST00000599833 GUCY1B3Q02153 619 aa22.17■■□□□ 1.14
SHKBP1-221ENST00000599833 PRR16Q569H4 304 aa22.17■■□□□ 1.14
SHKBP1-221ENST00000599833 PIK3AP1Q6ZUJ8 805 aa22.17■■□□□ 1.14
SHKBP1-221ENST00000599833 TRIM50Q86XT4 487 aa22.17■■□□□ 1.14
SHKBP1-221ENST00000599833 UIMC1Q96RL1 719 aa22.17■■□□□ 1.14
SHKBP1-221ENST00000599833 SEZ6LQ9BYH1 1024 aa22.17■■□□□ 1.14
SHKBP1-221ENST00000599833 JPH1Q9HDC5 661 aaPredicted RBP22.17■■□□□ 1.14
SHKBP1-221ENST00000599833 MROH7Q68CQ1 1323 aa22.16■■□□□ 1.14
SHKBP1-221ENST00000599833 IPO5O00410 1097 aaKnown RBP22.16■■□□□ 1.14
SHKBP1-221ENST00000599833 SLC37A4O43826 429 aa22.16■■□□□ 1.14
SHKBP1-221ENST00000599833 LGR5O75473 907 aa22.16■■□□□ 1.14
SHKBP1-221ENST00000599833 CLTBP09497 229 aa22.16■■□□□ 1.14
SHKBP1-221ENST00000599833 ETNPPLQ8TBG4 499 aa22.16■■□□□ 1.14
SHKBP1-221ENST00000599833 VTI1AQ96AJ9 217 aa22.16■■□□□ 1.14
SHKBP1-221ENST00000599833 C8orf76Q96K31 380 aa22.16■■□□□ 1.14
SHKBP1-221ENST00000599833 TRPV6Q9H1D0 765 aa22.16■■□□□ 1.14
SHKBP1-221ENST00000599833 SLC9A2Q9UBY0 812 aa22.16■■□□□ 1.14
SHKBP1-221ENST00000599833 SZT2Q5T011 3432 aa22.16■■□□□ 1.14
SHKBP1-221ENST00000599833 IGKV6D-21A0A0A0MT36 114 aa22.15■■□□□ 1.14
SHKBP1-221ENST00000599833 TCF7P36402 384 aaPredicted RBP22.15■■□□□ 1.14
SHKBP1-221ENST00000599833 SP4Q02446 784 aa22.15■■□□□ 1.14
SHKBP1-221ENST00000599833 MFSD10Q14728 455 aa22.15■■□□□ 1.14
SHKBP1-221ENST00000599833 B3GNT9Q6UX72 402 aa22.15■■□□□ 1.14
SHKBP1-221ENST00000599833 SLC5A5Q92911 643 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms