RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 HIP1O00291 1037 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 TREHO43280 583 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 CYTH3O43739 400 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 CAND2O75155 1236 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 LGALS2P05162 132 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 POLR2MP0CAP2 368 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 CCND2P30279 289 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 NUCB1Q02818 461 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 SEMA3FQ13275 785 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 COL19A1Q14993 1142 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 PTCRAQ6ISU1 281 aaPredicted RBP11.57□□□□□ -0.56
LIG1-209ENST00000596104 B4GALNT3Q6L9W6 998 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 CYB5R4Q7L1T6 521 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 SEPT8Q92599 483 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 TOP1MTQ969P6 601 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 SAMD11Q96NU1 681 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 INPP4AQ96PE3 977 aaPredicted RBP11.57□□□□□ -0.56
LIG1-209ENST00000596104 RNPEPQ9H4A4 650 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 RIOX1Q9H6W3 641 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 MLXIPQ9HAP2 919 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 FRMPD4Q14CM0 1322 aa11.57□□□□□ -0.56
LIG1-209ENST00000596104 H3BNC9 293 aa11.56□□□□□ -0.56
LIG1-209ENST00000596104 IGHDP01880 384 aa11.56□□□□□ -0.56
LIG1-209ENST00000596104 CTSHP09668 335 aa11.56□□□□□ -0.56
LIG1-209ENST00000596104 ICAM3P32942 547 aa11.56□□□□□ -0.56
LIG1-209ENST00000596104 ADAM17P78536 824 aa11.56□□□□□ -0.56
LIG1-209ENST00000596104 MRPS9P82933 396 aaKnown RBP11.56□□□□□ -0.56
LIG1-209ENST00000596104 GRM4Q14833 912 aa11.56□□□□□ -0.56
LIG1-209ENST00000596104 PTPROQ16827 1216 aa11.56□□□□□ -0.56
LIG1-209ENST00000596104 TIGD5Q53EQ6 642 aa11.56□□□□□ -0.56
LIG1-209ENST00000596104 METTL7BQ6UX53 244 aa11.56□□□□□ -0.56
LIG1-209ENST00000596104 FCHSD1Q86WN1 690 aa11.56□□□□□ -0.56
LIG1-209ENST00000596104 HOMER1Q86YM7 354 aa11.56□□□□□ -0.56
LIG1-209ENST00000596104 BANK1Q8NDB2 785 aa11.56□□□□□ -0.56
LIG1-209ENST00000596104 PIGSQ96S52 555 aa11.56□□□□□ -0.56
LIG1-209ENST00000596104 YME1L1Q96TA2 773 aa11.56□□□□□ -0.56
LIG1-209ENST00000596104 LAMA4Q16363 1823 aa11.56□□□□□ -0.56
LIG1-209ENST00000596104 COL4A6Q14031 1691 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 PIEZO1Q92508 2521 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 KIAA1217Q5T5P2 1943 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 PRR33A8MZF0 331 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 SPATA31C2B4DYI2 1134 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 H3BQ06 376 aaPredicted RBP11.55□□□□□ -0.56
LIG1-209ENST00000596104 TRAF1Q13077 416 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 GPM6BQ13491 265 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 AAMPQ13685 434 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 PUS10Q3MIT2 529 aaKnown RBP11.55□□□□□ -0.56
LIG1-209ENST00000596104 TCEAL5Q5H9L2 206 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 FAM26DQ5JW98 314 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 TRIM50Q86XT4 487 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 TMEM192Q8IY95 271 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 PABPC5Q96DU9 382 aaKnown RBP11.55□□□□□ -0.56
LIG1-209ENST00000596104 GPR20Q99678 358 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 USP26Q9BXU7 913 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 RWDD1Q9H446 243 aaPredicted RBP11.55□□□□□ -0.56
LIG1-209ENST00000596104 SENP2Q9HC62 589 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 SETD4Q9NVD3 440 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 TELO2Q9Y4R8 837 aa11.55□□□□□ -0.56
LIG1-209ENST00000596104 PNMA6FA0A0J9YX94 578 aa11.54□□□□□ -0.56
LIG1-209ENST00000596104 NOP56O00567 594 aaKnown RBP11.54□□□□□ -0.56
LIG1-209ENST00000596104 STAM2O75886 525 aa11.54□□□□□ -0.56
LIG1-209ENST00000596104 UPP2O95045 317 aa11.54□□□□□ -0.56
LIG1-209ENST00000596104 LINC00271P0C7V0 271 aa11.54□□□□□ -0.56
LIG1-209ENST00000596104 SSTR3P32745 418 aaPredicted RBP11.54□□□□□ -0.56
LIG1-209ENST00000596104 TROAPQ12815 778 aa11.54□□□□□ -0.56
LIG1-209ENST00000596104 NEDD9Q14511 834 aa11.54□□□□□ -0.56
LIG1-209ENST00000596104 GNPTABQ3T906 1256 aa11.54□□□□□ -0.56
LIG1-209ENST00000596104 CYFIP1Q7L576 1253 aa11.54□□□□□ -0.56
LIG1-209ENST00000596104 IFIH1Q9BYX4 1025 aaKnown RBP11.54□□□□□ -0.56
LIG1-209ENST00000596104 MUC6Q6W4X9 2439 aa11.54□□□□□ -0.56
LIG1-209ENST00000596104 SIP14410 1827 aa11.53□□□□□ -0.56
LIG1-209ENST00000596104 POTEB3A0JP26 581 aa11.53□□□□□ -0.56
LIG1-209ENST00000596104 FIBPO43427 364 aa11.53□□□□□ -0.56
LIG1-209ENST00000596104 GNAT1P11488 350 aa11.53□□□□□ -0.56
LIG1-209ENST00000596104 ALADP13716 330 aa11.53□□□□□ -0.56
LIG1-209ENST00000596104 ZP2Q05996 745 aa11.53□□□□□ -0.56
LIG1-209ENST00000596104 POTEBQ6S5H4 581 aa11.53□□□□□ -0.56
LIG1-209ENST00000596104 RPAINQ86UA6 219 aa11.53□□□□□ -0.56
LIG1-209ENST00000596104 LMBR1Q8WVP7 490 aa11.53□□□□□ -0.56
LIG1-209ENST00000596104 APBB2Q92870 758 aa11.53□□□□□ -0.56
LIG1-209ENST00000596104 NSUN3Q9H649 340 aaKnown RBP11.53□□□□□ -0.56
LIG1-209ENST00000596104 RC3H2Q9HBD1 1191 aaKnown RBP11.53□□□□□ -0.56
LIG1-209ENST00000596104 RTEL1Q9NZ71 1219 aa11.53□□□□□ -0.56
LIG1-209ENST00000596104 TAF6LQ9Y6J9 622 aa11.53□□□□□ -0.56
LIG1-209ENST00000596104 C19orf67A6NJJ6 358 aa11.52□□□□□ -0.57
LIG1-209ENST00000596104 C5orf67F2Z3F1 127 aa11.52□□□□□ -0.57
LIG1-209ENST00000596104 IFIT3O14879 490 aaKnown RBP11.52□□□□□ -0.57
LIG1-209ENST00000596104 DCXO43602 365 aa11.52□□□□□ -0.57
LIG1-209ENST00000596104 CHRNA1P02708 482 aa11.52□□□□□ -0.57
LIG1-209ENST00000596104 CYP21A2P08686 494 aa11.52□□□□□ -0.57
LIG1-209ENST00000596104 LTBRP36941 435 aa11.52□□□□□ -0.57
LIG1-209ENST00000596104 ARHGAP4P98171 946 aa11.52□□□□□ -0.57
LIG1-209ENST00000596104 CTC1Q2NKJ3 1217 aa11.52□□□□□ -0.57
LIG1-209ENST00000596104 IL17RAQ96F46 866 aa11.52□□□□□ -0.57
LIG1-209ENST00000596104 SENP7Q9BQF6 1050 aa11.52□□□□□ -0.57
LIG1-209ENST00000596104 EHMT1Q9H9B1 1298 aa11.52□□□□□ -0.57
LIG1-209ENST00000596104 PRKAG3Q9UGI9 489 aa11.52□□□□□ -0.57
LIG1-209ENST00000596104 ZNF215Q9UL58 517 aaPredicted RBP11.52□□□□□ -0.57
LIG1-209ENST00000596104 SUPT16HQ9Y5B9 1047 aaKnown RBP11.52□□□□□ -0.57
LIG1-209ENST00000596104 MEIS2O14770 477 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms