RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 UNC93B1Q9H1C4 597 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 GDPD2Q9HCC8 539 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 FAM13BQ9NYF5 915 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 USP25Q9UHP3 1055 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 NRBP1Q9UHY1 535 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 HOOK1Q9UJC3 728 aaKnown RBP14.29□□□□□ -0.12
VMP1-202ENST00000585847 STK24Q9Y6E0 443 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 CYP3A7-CYP3A51PA0A087WV96 503 aa14.28□□□□□ -0.12
VMP1-202ENST00000585847 MEIS1O00470 390 aa14.28□□□□□ -0.12
VMP1-202ENST00000585847 KINO60870 393 aaKnown RBP14.28□□□□□ -0.12
VMP1-202ENST00000585847 TDP2O95551 362 aa14.28□□□□□ -0.12
VMP1-202ENST00000585847 ARP10275 920 aa14.28□□□□□ -0.12
VMP1-202ENST00000585847 CYP3A7P24462 503 aa14.28□□□□□ -0.12
VMP1-202ENST00000585847 ICAM3P32942 547 aa14.28□□□□□ -0.12
VMP1-202ENST00000585847 LONP1P36776 959 aaKnown RBP14.28□□□□□ -0.12
VMP1-202ENST00000585847 TXLNAP40222 546 aa14.28□□□□□ -0.12
VMP1-202ENST00000585847 ADCYAP1R1P41586 468 aa14.28□□□□□ -0.12
VMP1-202ENST00000585847 TOB1P50616 345 aaPredicted RBP14.28□□□□□ -0.12
VMP1-202ENST00000585847 SP2Q02086 613 aa14.28□□□□□ -0.12
VMP1-202ENST00000585847 GJC2Q5T442 439 aaPredicted RBP14.28□□□□□ -0.12
VMP1-202ENST00000585847 GPT2Q8TD30 523 aa14.28□□□□□ -0.12
VMP1-202ENST00000585847 LENG1Q96BZ8 264 aaPredicted RBP14.28□□□□□ -0.12
VMP1-202ENST00000585847 TIGD1Q96MW7 591 aa14.28□□□□□ -0.12
VMP1-202ENST00000585847 MXRA8Q9BRK3 442 aa14.28□□□□□ -0.12
VMP1-202ENST00000585847 BCAS3Q9H6U6 928 aa14.28□□□□□ -0.12
VMP1-202ENST00000585847 JADE2Q9NQC1 790 aa14.28□□□□□ -0.12
VMP1-202ENST00000585847 ZHX1Q9UKY1 873 aaPredicted RBP14.28□□□□□ -0.12
VMP1-202ENST00000585847 CLIC4Q9Y696 253 aa14.28□□□□□ -0.12
VMP1-202ENST00000585847 B4DLN1 442 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 SPATA31C2B4DYI2 1134 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 TBX3O15119 743 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 NEMFO60524 1076 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 STAM2O75886 525 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 CAVIN2O95810 425 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 CCL5P13501 91 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 SMPD1P17405 629 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 ZNF445P59923 1031 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 IRX5P78411 483 aaPredicted RBP14.27□□□□□ -0.13
VMP1-202ENST00000585847 CCDC144BQ3MJ40 725 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 LHX8Q68G74 356 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 KANK3Q6NY19 840 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 SEPT14Q6ZU15 432 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 COPS5Q92905 334 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 RNF208Q9H0X6 261 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 PAK6Q9NQU5 681 aaPredicted RBP14.27□□□□□ -0.13
VMP1-202ENST00000585847 PCDHA7Q9UN72 937 aa14.27□□□□□ -0.13
VMP1-202ENST00000585847 GNEQ9Y223 722 aaKnown RBP14.27□□□□□ -0.13
VMP1-202ENST00000585847 TRIOBPQ9H2D6 2365 aa14.26□□□□□ -0.13
VMP1-202ENST00000585847 SEPT4O43236 478 aa14.26□□□□□ -0.13
VMP1-202ENST00000585847 SLC37A4O43826 429 aa14.26□□□□□ -0.13
VMP1-202ENST00000585847 ATP9AO75110 1047 aa14.26□□□□□ -0.13
VMP1-202ENST00000585847 CEBPZQ03701 1054 aaKnown RBP14.26□□□□□ -0.13
VMP1-202ENST00000585847 CEP55Q53EZ4 464 aa14.26□□□□□ -0.13
VMP1-202ENST00000585847 AXDND1Q5T1B0 1012 aaPredicted RBP14.26□□□□□ -0.13
VMP1-202ENST00000585847 RESP18Q5W5W9 173 aa14.26□□□□□ -0.13
VMP1-202ENST00000585847 CAVIN1Q6NZI2 390 aaKnown RBP14.26□□□□□ -0.13
VMP1-202ENST00000585847 KCTD17Q8N5Z5 321 aa14.26□□□□□ -0.13
VMP1-202ENST00000585847 GPRASP2Q96D09 838 aa14.26□□□□□ -0.13
VMP1-202ENST00000585847 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.26□□□□□ -0.13
VMP1-202ENST00000585847 NUP62CLQ9H1M0 184 aa14.26□□□□□ -0.13
VMP1-202ENST00000585847 HMX1Q9NP08 348 aaPredicted RBP14.26□□□□□ -0.13
VMP1-202ENST00000585847 DDX41Q9UJV9 622 aaKnown RBP14.26□□□□□ -0.13
VMP1-202ENST00000585847 TELO2Q9Y4R8 837 aa14.26□□□□□ -0.13
VMP1-202ENST00000585847 PCDHB6Q9Y5E3 794 aa14.26□□□□□ -0.13
VMP1-202ENST00000585847 NR2E3Q9Y5X4 410 aa14.26□□□□□ -0.13
VMP1-202ENST00000585847 GJB1P08034 283 aa14.25□□□□□ -0.13
VMP1-202ENST00000585847 KCNA2P16389 499 aa14.25□□□□□ -0.13
VMP1-202ENST00000585847 GJA8P48165 433 aa14.25□□□□□ -0.13
VMP1-202ENST00000585847 LY6KQ17RY6 165 aa14.25□□□□□ -0.13
VMP1-202ENST00000585847 TMEM266Q2M3C6 531 aa14.25□□□□□ -0.13
VMP1-202ENST00000585847 LETM2Q2VYF4 491 aa14.25□□□□□ -0.13
VMP1-202ENST00000585847 Q4G0T1 1027 aa14.25□□□□□ -0.13
VMP1-202ENST00000585847 IQSEC1Q6DN90 963 aa14.25□□□□□ -0.13
VMP1-202ENST00000585847 NIPA1Q7RTP0 329 aa14.25□□□□□ -0.13
VMP1-202ENST00000585847 PLA2G4DQ86XP0 818 aa14.25□□□□□ -0.13
VMP1-202ENST00000585847 SLFN12Q8IYM2 578 aa14.25□□□□□ -0.13
VMP1-202ENST00000585847 MPHOSPH6Q99547 160 aaKnown RBP14.25□□□□□ -0.13
VMP1-202ENST00000585847 DDX20Q9UHI6 824 aaKnown RBP14.25□□□□□ -0.13
VMP1-202ENST00000585847 FBXO2Q9UK22 296 aaPredicted RBP14.25□□□□□ -0.13
VMP1-202ENST00000585847 FAM184BQ9ULE4 1060 aa14.25□□□□□ -0.13
VMP1-202ENST00000585847 WDR81Q562E7 1941 aa14.25□□□□□ -0.13
VMP1-202ENST00000585847 DHX15O43143 795 aaKnown RBP14.24□□□□□ -0.13
VMP1-202ENST00000585847 GADD45BO75293 160 aaPredicted RBP14.24□□□□□ -0.13
VMP1-202ENST00000585847 OR52Z1P0C646 297 aa14.24□□□□□ -0.13
VMP1-202ENST00000585847 AKR1A1P14550 325 aa14.24□□□□□ -0.13
VMP1-202ENST00000585847 UBA1P22314 1058 aaKnown RBP14.24□□□□□ -0.13
VMP1-202ENST00000585847 NKX3-2P78367 333 aa14.24□□□□□ -0.13
VMP1-202ENST00000585847 SETQ01105 290 aaPredicted RBP14.24□□□□□ -0.13
VMP1-202ENST00000585847 TNFAIP2Q03169 654 aa14.24□□□□□ -0.13
VMP1-202ENST00000585847 ITGB3BPQ13352 177 aaPredicted RBP14.24□□□□□ -0.13
VMP1-202ENST00000585847 DUSP28Q4G0W2 176 aa14.24□□□□□ -0.13
VMP1-202ENST00000585847 DTHD1Q6ZMT9 781 aa14.24□□□□□ -0.13
VMP1-202ENST00000585847 C4orf32Q8N8J7 132 aa14.24□□□□□ -0.13
VMP1-202ENST00000585847 FSIP1Q8NA03 581 aa14.24□□□□□ -0.13
VMP1-202ENST00000585847 SCFD2Q8WU76 684 aa14.24□□□□□ -0.13
VMP1-202ENST00000585847 GJA10Q969M2 543 aa14.24□□□□□ -0.13
VMP1-202ENST00000585847 UIMC1Q96RL1 719 aa14.24□□□□□ -0.13
VMP1-202ENST00000585847 TMEM60Q9H2L4 133 aa14.24□□□□□ -0.13
VMP1-202ENST00000585847 CLSTN2Q9H4D0 955 aa14.24□□□□□ -0.13
VMP1-202ENST00000585847 MAGEF1Q9HAY2 307 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms