RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 DAGLAQ9Y4D2 1042 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 BUB1O43683 1085 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TTLL1O95922 423 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 GCFC2P16383 781 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 MARSP56192 900 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 EIF6P56537 245 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 VPS72Q15906 364 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 GLE1Q53GS7 698 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 SFMBT2Q5VUG0 894 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 DPP8Q6V1X1 898 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 CUL5Q93034 780 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 SH3GL2Q99962 352 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 BMP2KQ9NSY1 1161 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 RNF14Q9UBS8 474 aa15.67■□□□□ 0.1
CDK5RAP3-237ENST00000585163 GNA14O95837 355 aa15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 MRPL12P52815 198 aaKnown RBP15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 CFAP221Q4G0U5 840 aa15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 CLEC10AQ8IUN9 316 aa15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 GJA10Q969M2 543 aa15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 RBM12Q9NTZ6 932 aaKnown RBP15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 RSPH14Q9UHP6 348 aa15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 PCDHA2Q9Y5H9 948 aa15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 MYH7BA7E2Y1 1941 aa15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 KDM3AQ9Y4C1 1321 aa15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 MRPS25P82663 173 aaKnown RBP15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 C8orf74Q6P047 294 aa15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TRIM59Q8IWR1 403 aa15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 CAVIN3Q969G5 261 aa15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 FGFBP2Q9BYJ0 223 aa15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 POLLQ9UGP5 575 aa15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 ATP6V0A2Q9Y487 856 aa15.66■□□□□ 0.1
CDK5RAP3-237ENST00000585163 PICALMQ13492 652 aa15.65■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TBC1D16Q8TBP0 767 aa15.65■□□□□ 0.1
CDK5RAP3-237ENST00000585163 LUC7LQ9NQ29 371 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP3-237ENST00000585163 KCNG1Q9UIX4 513 aa15.65■□□□□ 0.1
CDK5RAP3-237ENST00000585163 C10orf71Q711Q0 1435 aa15.65■□□□□ 0.1
CDK5RAP3-237ENST00000585163 MARCH6O60337 910 aa15.65■□□□□ 0.1
CDK5RAP3-237ENST00000585163 NAP1L1P55209 391 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP3-237ENST00000585163 POLR2FP61218 127 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP3-237ENST00000585163 NAB2Q15742 525 aa15.65■□□□□ 0.1
CDK5RAP3-237ENST00000585163 TTBK2Q6IQ55 1244 aa15.65■□□□□ 0.1
CDK5RAP3-237ENST00000585163 CCDC65Q8IXS2 484 aa15.65■□□□□ 0.1
CDK5RAP3-237ENST00000585163 LSM14BQ9BX40 385 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP3-237ENST00000585163 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.65■□□□□ 0.1
CDK5RAP3-237ENST00000585163 GOLGA8KD6RF30 607 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 E9PMD0 336 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ZBTB5O15062 677 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 EPB41P11171 864 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 PPFIA1Q13136 1202 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 SLC18A3Q16572 532 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 GPATCH4Q5T3I0 446 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ALS2CLQ60I27 953 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 MS4A14Q96JA4 679 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 KCTD10Q9H3F6 313 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 PSTPIP2Q9H939 334 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 TBC1D7Q9P0N9 293 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 SWAP70Q9UH65 585 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ATF5Q9Y2D1 282 aaPredicted RBP15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ATAD5Q96QE3 1844 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 OPA1O60313 960 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 SSBP05455 408 aaKnown RBP eCLIP15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 FAM196AQ6ZSG2 479 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 TMC4Q7Z404 712 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ZC3H3Q8IXZ2 948 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 SCFD1Q8WVM8 642 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 RBM17Q96I25 401 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 NAP1L4Q99733 375 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 AIPL1Q9NZN9 384 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 SERPINB13Q9UIV8 391 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 KIAA1024Q9UPX6 916 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 PCDHGC5Q9Y5F6 944 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 LY75O60449 1722 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 MYO3BQ8WXR4 1341 aa15.64■□□□□ 0.09
CDK5RAP3-237ENST00000585163 VGLL3A8MV65 326 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 PALMO75781 387 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 BBOX1O75936 387 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 PLA2G4BP0C869 781 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 NNTQ13423 1086 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 NELFCDQ8IXH7 590 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 TSEN2Q8NCE0 465 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 TBC1D5Q92609 795 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 DDX4Q9NQI0 724 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ARFGEF1Q9Y6D6 1849 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 USP17L10C9JJH3 530 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 KLRC1P26715 233 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 SLC16A2P36021 539 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 IRAK1P51617 712 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 HERC4Q5GLZ8 1057 aaPredicted RBP15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 GBP6Q6ZN66 633 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 TRIM34Q9BYJ4 488 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 PLEKHA4Q9H4M7 779 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 GDF3Q9NR23 364 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 EMILIN3Q9NT22 766 aa15.63■□□□□ 0.09
CDK5RAP3-237ENST00000585163 A0A087X0T9 212 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 SLC26A4O43511 780 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 FAM228BP0C875 321 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 CYP11B2P19099 503 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 GTF2IP78347 998 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 APBA1Q02410 837 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 GPBP1Q86WP2 473 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms