RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 COL4A6Q14031 1691 aa15.73■□□□□ 0.11
SS18-222ENST00000582792 PALM3A6NDB9 673 aaPredicted RBP15.73■□□□□ 0.11
SS18-222ENST00000582792 H3BRB1 525 aa15.73■□□□□ 0.11
SS18-222ENST00000582792 CAND2O75155 1236 aa15.73■□□□□ 0.11
SS18-222ENST00000582792 IL9P15248 144 aa15.73■□□□□ 0.11
SS18-222ENST00000582792 CCND2P30279 289 aa15.73■□□□□ 0.11
SS18-222ENST00000582792 NUCB1Q02818 461 aa15.73■□□□□ 0.11
SS18-222ENST00000582792 SEC23AQ15436 765 aa15.73■□□□□ 0.11
SS18-222ENST00000582792 PTPROQ16827 1216 aa15.73■□□□□ 0.11
SS18-222ENST00000582792 EPC2Q52LR7 807 aa15.73■□□□□ 0.11
SS18-222ENST00000582792 PTCRAQ6ISU1 281 aaPredicted RBP15.73■□□□□ 0.11
SS18-222ENST00000582792 B4GALNT3Q6L9W6 998 aa15.73■□□□□ 0.11
SS18-222ENST00000582792 SEPT8Q92599 483 aa15.73■□□□□ 0.11
SS18-222ENST00000582792 GPKOWQ92917 476 aaPredicted RBP eCLIP15.73■□□□□ 0.11
SS18-222ENST00000582792 TUT1Q9H6E5 874 aaKnown RBP15.73■□□□□ 0.11
SS18-222ENST00000582792 GCOM1H8Y6P7 765 aaPredicted RBP15.72■□□□□ 0.11
SS18-222ENST00000582792 TREHO43280 583 aa15.72■□□□□ 0.11
SS18-222ENST00000582792 LGALS2P05162 132 aa15.72■□□□□ 0.11
SS18-222ENST00000582792 POLR2MP0CAP2 368 aa15.72■□□□□ 0.11
SS18-222ENST00000582792 SMIM10L2AP0DMW4 78 aa15.72■□□□□ 0.11
SS18-222ENST00000582792 SMIM10L2BP0DMW5 78 aa15.72■□□□□ 0.11
SS18-222ENST00000582792 TRAF1Q13077 416 aa15.72■□□□□ 0.11
SS18-222ENST00000582792 PUS10Q3MIT2 529 aaKnown RBP15.72■□□□□ 0.11
SS18-222ENST00000582792 TIGD5Q53EQ6 642 aa15.72■□□□□ 0.11
SS18-222ENST00000582792 CHD1LQ86WJ1 897 aa15.72■□□□□ 0.11
SS18-222ENST00000582792 NEK9Q8TD19 979 aa15.72■□□□□ 0.11
SS18-222ENST00000582792 TOP1MTQ969P6 601 aa15.72■□□□□ 0.11
SS18-222ENST00000582792 ZFP91Q96JP5 570 aaPredicted RBP15.72■□□□□ 0.11
SS18-222ENST00000582792 YME1L1Q96TA2 773 aa15.72■□□□□ 0.11
SS18-222ENST00000582792 RNPEPQ9H4A4 650 aa15.72■□□□□ 0.11
SS18-222ENST00000582792 TRIOO75962 3097 aa15.71■□□□□ 0.11
SS18-222ENST00000582792 MUC6Q6W4X9 2439 aa15.71■□□□□ 0.11
SS18-222ENST00000582792 GRXCR2A6NFK2 248 aa15.71■□□□□ 0.11
SS18-222ENST00000582792 PRR33A8MZF0 331 aa15.71■□□□□ 0.11
SS18-222ENST00000582792 H3BNC9 293 aa15.71■□□□□ 0.11
SS18-222ENST00000582792 SSTR3P32745 418 aaPredicted RBP15.71■□□□□ 0.11
SS18-222ENST00000582792 SLC35G1Q2M3R5 365 aa15.71■□□□□ 0.11
SS18-222ENST00000582792 CYB5R4Q7L1T6 521 aa15.71■□□□□ 0.11
SS18-222ENST00000582792 FCHSD1Q86WN1 690 aa15.71■□□□□ 0.11
SS18-222ENST00000582792 HOMER1Q86YM7 354 aa15.71■□□□□ 0.11
SS18-222ENST00000582792 OSBPL7Q9BZF2 842 aa15.71■□□□□ 0.11
SS18-222ENST00000582792 BCAS3Q9H6U6 928 aa15.71■□□□□ 0.11
SS18-222ENST00000582792 RIOX1Q9H6W3 641 aa15.71■□□□□ 0.11
SS18-222ENST00000582792 PIEZO1Q92508 2521 aa15.71■□□□□ 0.11
SS18-222ENST00000582792 C5orf42Q9H799 3197 aa15.7■□□□□ 0.1
SS18-222ENST00000582792 NLRC5Q86WI3 1866 aa15.7■□□□□ 0.1
SS18-222ENST00000582792 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.7■□□□□ 0.1
SS18-222ENST00000582792 NOP56O00567 594 aaKnown RBP15.7■□□□□ 0.1
SS18-222ENST00000582792 CTSHP09668 335 aa15.7■□□□□ 0.1
SS18-222ENST00000582792 ICAM3P32942 547 aa15.7■□□□□ 0.1
SS18-222ENST00000582792 GPM6BQ13491 265 aa15.7■□□□□ 0.1
SS18-222ENST00000582792 GRM4Q14833 912 aa15.7■□□□□ 0.1
SS18-222ENST00000582792 GNPTABQ3T906 1256 aa15.7■□□□□ 0.1
SS18-222ENST00000582792 CENPQQ7L2Z9 268 aaPredicted RBP15.7■□□□□ 0.1
SS18-222ENST00000582792 TMEM192Q8IY95 271 aa15.7■□□□□ 0.1
SS18-222ENST00000582792 BANK1Q8NDB2 785 aa15.7■□□□□ 0.1
SS18-222ENST00000582792 INPP4AQ96PE3 977 aaPredicted RBP15.7■□□□□ 0.1
SS18-222ENST00000582792 PIGSQ96S52 555 aa15.7■□□□□ 0.1
SS18-222ENST00000582792 USP26Q9BXU7 913 aa15.7■□□□□ 0.1
SS18-222ENST00000582792 FRMPD4Q14CM0 1322 aa15.69■□□□□ 0.1
SS18-222ENST00000582792 RALGAPA2Q2PPJ7 1873 aa15.69■□□□□ 0.1
SS18-222ENST00000582792 WDFY4Q6ZS81 3184 aa15.69■□□□□ 0.1
SS18-222ENST00000582792 H3BQ06 376 aaPredicted RBP15.69■□□□□ 0.1
SS18-222ENST00000582792 STAM2O75886 525 aa15.69■□□□□ 0.1
SS18-222ENST00000582792 UPP2O95045 317 aa15.69■□□□□ 0.1
SS18-222ENST00000582792 GNAT1P11488 350 aa15.69■□□□□ 0.1
SS18-222ENST00000582792 ALADP13716 330 aa15.69■□□□□ 0.1
SS18-222ENST00000582792 MRPS9P82933 396 aaKnown RBP15.69■□□□□ 0.1
SS18-222ENST00000582792 NEDD9Q14511 834 aa15.69■□□□□ 0.1
SS18-222ENST00000582792 COL19A1Q14993 1142 aa15.69■□□□□ 0.1
SS18-222ENST00000582792 TCEAL5Q5H9L2 206 aa15.69■□□□□ 0.1
SS18-222ENST00000582792 METTL7BQ6UX53 244 aa15.69■□□□□ 0.1
SS18-222ENST00000582792 APBB2Q92870 758 aa15.69■□□□□ 0.1
SS18-222ENST00000582792 PABPC5Q96DU9 382 aaKnown RBP15.69■□□□□ 0.1
SS18-222ENST00000582792 GPR20Q99678 358 aa15.69■□□□□ 0.1
SS18-222ENST00000582792 IFIH1Q9BYX4 1025 aaKnown RBP15.69■□□□□ 0.1
SS18-222ENST00000582792 IL25Q9H293 177 aa15.69■□□□□ 0.1
SS18-222ENST00000582792 SETD4Q9NVD3 440 aa15.69■□□□□ 0.1
SS18-222ENST00000582792 PNMA6FA0A0J9YX94 578 aa15.68■□□□□ 0.1
SS18-222ENST00000582792 SPATA31C2B4DYI2 1134 aa15.68■□□□□ 0.1
SS18-222ENST00000582792 CYTH3O43739 400 aa15.68■□□□□ 0.1
SS18-222ENST00000582792 ADAM17P78536 824 aa15.68■□□□□ 0.1
SS18-222ENST00000582792 SEMA3FQ13275 785 aa15.68■□□□□ 0.1
SS18-222ENST00000582792 FAM26DQ5JW98 314 aa15.68■□□□□ 0.1
SS18-222ENST00000582792 CYFIP1Q7L576 1253 aa15.68■□□□□ 0.1
SS18-222ENST00000582792 NSUN3Q9H649 340 aaKnown RBP15.68■□□□□ 0.1
SS18-222ENST00000582792 PPP4R2Q9NY27 417 aa15.68■□□□□ 0.1
SS18-222ENST00000582792 BAZ2BQ9UIF8 2168 aaKnown RBP15.68■□□□□ 0.1
SS18-222ENST00000582792 DOCK5Q9H7D0 1870 aa15.67■□□□□ 0.1
SS18-222ENST00000582792 FIBPO43427 364 aa15.67■□□□□ 0.1
SS18-222ENST00000582792 TRDNQ13061 729 aa15.67■□□□□ 0.1
SS18-222ENST00000582792 TRIM50Q86XT4 487 aa15.67■□□□□ 0.1
SS18-222ENST00000582792 CCDC136Q96JN2 1154 aa15.67■□□□□ 0.1
SS18-222ENST00000582792 ZNF215Q9UL58 517 aaPredicted RBP15.67■□□□□ 0.1
SS18-222ENST00000582792 FAM50BQ9Y247 325 aa15.67■□□□□ 0.1
SS18-222ENST00000582792 C5orf67F2Z3F1 127 aa15.66■□□□□ 0.1
SS18-222ENST00000582792 IFIT3O14879 490 aaKnown RBP15.66■□□□□ 0.1
SS18-222ENST00000582792 ARHGAP4P98171 946 aa15.66■□□□□ 0.1
SS18-222ENST00000582792 TROAPQ12815 778 aa15.66■□□□□ 0.1
SS18-222ENST00000582792 LMBR1Q8WVP7 490 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms