RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 CYTH3O43739 400 aa13.66□□□□□ -0.22
CDH8-202ENST00000577228 CAND2O75155 1236 aa13.66□□□□□ -0.22
CDH8-202ENST00000577228 CTSHP09668 335 aa13.66□□□□□ -0.22
CDH8-202ENST00000577228 HOXC8P31273 242 aa13.66□□□□□ -0.22
CDH8-202ENST00000577228 HTRA4P83105 476 aaPredicted RBP13.66□□□□□ -0.22
CDH8-202ENST00000577228 WTAPQ15007 396 aa13.66□□□□□ -0.22
CDH8-202ENST00000577228 PLEKHG4Q58EX7 1191 aa13.66□□□□□ -0.22
CDH8-202ENST00000577228 TMEM31Q5JXX7 168 aa13.66□□□□□ -0.22
CDH8-202ENST00000577228 EXOC6Q8TAG9 804 aa13.66□□□□□ -0.22
CDH8-202ENST00000577228 SP7Q8TDD2 431 aaPredicted RBP13.66□□□□□ -0.22
CDH8-202ENST00000577228 LRFN3Q9BTN0 628 aa13.66□□□□□ -0.22
CDH8-202ENST00000577228 BCAS3Q9H6U6 928 aa13.66□□□□□ -0.22
CDH8-202ENST00000577228 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
CDH8-202ENST00000577228 FRMPD4Q14CM0 1322 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 MICAL3Q7RTP6 2002 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 STAM2O75886 525 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 CYP21A2P08686 494 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 GNAT1P11488 350 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 KCNA5P22460 613 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 ICAM3P32942 547 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 NEDD9Q14511 834 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 SART3Q15020 963 aaKnown RBP13.65□□□□□ -0.22
CDH8-202ENST00000577228 METTL7BQ6UX53 244 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 RALYLQ86SE5 291 aaKnown RBP13.65□□□□□ -0.22
CDH8-202ENST00000577228 RUFY2Q8WXA3 655 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 SAMD11Q96NU1 681 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 INPP4AQ96PE3 977 aaPredicted RBP13.65□□□□□ -0.22
CDH8-202ENST00000577228 YME1L1Q96TA2 773 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 USP26Q9BXU7 913 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 RNPEPQ9H4A4 650 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 SENP2Q9HC62 589 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 ZNF215Q9UL58 517 aaPredicted RBP13.65□□□□□ -0.22
CDH8-202ENST00000577228 HCN4Q9Y3Q4 1203 aa13.65□□□□□ -0.22
CDH8-202ENST00000577228 XIRP2A4UGR9 3374 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 BAZ2BQ9UIF8 2168 aaKnown RBP13.64□□□□□ -0.23
CDH8-202ENST00000577228 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.64□□□□□ -0.23
CDH8-202ENST00000577228 SPATA31C2B4DYI2 1134 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 FIBPO43427 364 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 GSPT1P15170 499 aaKnown RBP13.64□□□□□ -0.23
CDH8-202ENST00000577228 MRPS9P82933 396 aaKnown RBP13.64□□□□□ -0.23
CDH8-202ENST00000577228 PTH1RQ03431 593 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 TROAPQ12815 778 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 SEMA3FQ13275 785 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 PTPROQ16827 1216 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 LEXMQ3ZCV2 418 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 CYFIP1Q7L576 1253 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 CATIPQ7Z7H3 387 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 TRIM50Q86XT4 487 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 PIBF1Q8WXW3 757 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 KHSRPQ92945 711 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDH8-202ENST00000577228 MRPL38Q96DV4 380 aaKnown RBP13.64□□□□□ -0.23
CDH8-202ENST00000577228 GPR20Q99678 358 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 SETD4Q9NVD3 440 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 RTEL1Q9NZ71 1219 aa13.64□□□□□ -0.23
CDH8-202ENST00000577228 EPC2Q52LR7 807 aa13.63□□□□□ -0.23
CDH8-202ENST00000577228 TIGD5Q53EQ6 642 aa13.63□□□□□ -0.23
CDH8-202ENST00000577228 UTP14CQ5TAP6 766 aaKnown RBP13.63□□□□□ -0.23
CDH8-202ENST00000577228 NCOA7Q8NI08 942 aa13.63□□□□□ -0.23
CDH8-202ENST00000577228 SMARCC2Q8TAQ2 1214 aa13.63□□□□□ -0.23
CDH8-202ENST00000577228 CUL5Q93034 780 aa13.63□□□□□ -0.23
CDH8-202ENST00000577228 TOP1MTQ969P6 601 aa13.63□□□□□ -0.23
CDH8-202ENST00000577228 CD320Q9NPF0 282 aa13.63□□□□□ -0.23
CDH8-202ENST00000577228 TAF6LQ9Y6J9 622 aa13.63□□□□□ -0.23
CDH8-202ENST00000577228 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.62□□□□□ -0.23
CDH8-202ENST00000577228 FAM86C2PA6NEL3 165 aa13.62□□□□□ -0.23
CDH8-202ENST00000577228 E7EWF7 191 aa13.62□□□□□ -0.23
CDH8-202ENST00000577228 GPR37L1O60883 481 aa13.62□□□□□ -0.23
CDH8-202ENST00000577228 UPP2O95045 317 aa13.62□□□□□ -0.23
CDH8-202ENST00000577228 PDE4AP27815 886 aa13.62□□□□□ -0.23
CDH8-202ENST00000577228 ARHGAP4P98171 946 aa13.62□□□□□ -0.23
CDH8-202ENST00000577228 SP4Q02446 784 aa13.62□□□□□ -0.23
CDH8-202ENST00000577228 GPM6BQ13491 265 aa13.62□□□□□ -0.23
CDH8-202ENST00000577228 PTCRAQ6ISU1 281 aaPredicted RBP13.62□□□□□ -0.23
CDH8-202ENST00000577228 XRRA1Q6P2D8 792 aa13.62□□□□□ -0.23
CDH8-202ENST00000577228 FAM178BQ8IXR5 827 aa13.62□□□□□ -0.23
CDH8-202ENST00000577228 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.62□□□□□ -0.23
CDH8-202ENST00000577228 LMBR1Q8WVP7 490 aa13.62□□□□□ -0.23
CDH8-202ENST00000577228 APBB2Q92870 758 aa13.62□□□□□ -0.23
CDH8-202ENST00000577228 IFIH1Q9BYX4 1025 aaKnown RBP13.62□□□□□ -0.23
CDH8-202ENST00000577228 OSBPL7Q9BZF2 842 aa13.62□□□□□ -0.23
CDH8-202ENST00000577228 ARIH1Q9Y4X5 557 aaPredicted RBP13.62□□□□□ -0.23
CDH8-202ENST00000577228 COL4A6Q14031 1691 aa13.62□□□□□ -0.23
CDH8-202ENST00000577228 PI4K2BG5E9Z4 385 aa13.61□□□□□ -0.23
CDH8-202ENST00000577228 H3BNC9 293 aa13.61□□□□□ -0.23
CDH8-202ENST00000577228 IL9P15248 144 aa13.61□□□□□ -0.23
CDH8-202ENST00000577228 CHMLP26374 656 aa13.61□□□□□ -0.23
CDH8-202ENST00000577228 SSTR3P32745 418 aaPredicted RBP13.61□□□□□ -0.23
CDH8-202ENST00000577228 ANTXR2P58335 489 aa13.61□□□□□ -0.23
CDH8-202ENST00000577228 FAM26DQ5JW98 314 aa13.61□□□□□ -0.23
CDH8-202ENST00000577228 PCNX4Q63HM2 1172 aa13.61□□□□□ -0.23
CDH8-202ENST00000577228 USP17L6PQ6QN14 398 aa13.61□□□□□ -0.23
CDH8-202ENST00000577228 NLRX1Q86UT6 975 aa13.61□□□□□ -0.23
CDH8-202ENST00000577228 TMEM192Q8IY95 271 aa13.61□□□□□ -0.23
CDH8-202ENST00000577228 GJD3Q8N144 294 aa13.61□□□□□ -0.23
CDH8-202ENST00000577228 BANK1Q8NDB2 785 aa13.61□□□□□ -0.23
CDH8-202ENST00000577228 CTCFLQ8NI51 663 aaPredicted RBP13.61□□□□□ -0.23
CDH8-202ENST00000577228 RRP36Q96EU6 259 aaKnown RBP13.61□□□□□ -0.23
CDH8-202ENST00000577228 YTHDC1Q96MU7 727 aaKnown RBP13.61□□□□□ -0.23
CDH8-202ENST00000577228 SENP7Q9BQF6 1050 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms