RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 DDIT3P35638 169 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 GJA8P48165 433 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 CALCRLQ16602 461 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 BRDTQ58F21 947 aaPredicted RBP26.37■■□□□ 1.81
TVP23A-206ENST00000572980 RNF180Q86T96 592 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 POTEDQ86YR6 584 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 ARRDC4Q8NCT1 418 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 ETNPPLQ8TBG4 499 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 RIT2Q99578 217 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 KCNMB3Q9NPA1 279 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 PCDHB6Q9Y5E3 794 aa26.37■■□□□ 1.81
TVP23A-206ENST00000572980 FARP2O94887 1054 aaPredicted RBP26.36■■□□□ 1.81
TVP23A-206ENST00000572980 TFRCP02786 760 aaKnown RBP26.36■■□□□ 1.81
TVP23A-206ENST00000572980 PTGS1P23219 599 aa26.36■■□□□ 1.81
TVP23A-206ENST00000572980 ITGB3BPQ13352 177 aaPredicted RBP26.36■■□□□ 1.81
TVP23A-206ENST00000572980 NBR1Q14596 966 aa26.36■■□□□ 1.81
TVP23A-206ENST00000572980 SLFN12Q8IYM2 578 aa26.36■■□□□ 1.81
TVP23A-206ENST00000572980 SLC5A5Q92911 643 aa26.36■■□□□ 1.81
TVP23A-206ENST00000572980 SPATA33Q96N06 139 aa26.36■■□□□ 1.81
TVP23A-206ENST00000572980 CRISPLD2Q9H0B8 497 aa26.36■■□□□ 1.81
TVP23A-206ENST00000572980 TCEAL9Q9UHQ7 104 aa26.36■■□□□ 1.81
TVP23A-206ENST00000572980 OGDHLQ9ULD0 1010 aa26.36■■□□□ 1.81
TVP23A-206ENST00000572980 SORBS3O60504 671 aa26.35■■□□□ 1.81
TVP23A-206ENST00000572980 ADAMTS4O75173 837 aa26.35■■□□□ 1.81
TVP23A-206ENST00000572980 CPT1AP50416 773 aa26.35■■□□□ 1.81
TVP23A-206ENST00000572980 NKX3-2P78367 333 aa26.35■■□□□ 1.81
TVP23A-206ENST00000572980 UIMC1Q96RL1 719 aa26.35■■□□□ 1.81
TVP23A-206ENST00000572980 JPH1Q9HDC5 661 aaPredicted RBP26.35■■□□□ 1.81
TVP23A-206ENST00000572980 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.35■■□□□ 1.81
TVP23A-206ENST00000572980 GAS7O60861 476 aa26.34■■□□□ 1.81
TVP23A-206ENST00000572980 MYCNP04198 464 aaPredicted RBP26.34■■□□□ 1.81
TVP23A-206ENST00000572980 FSCN1Q16658 493 aaKnown RBP26.34■■□□□ 1.81
TVP23A-206ENST00000572980 GNASQ5JWF2 1037 aa26.34■■□□□ 1.81
TVP23A-206ENST00000572980 LRCH2Q5VUJ6 765 aa26.34■■□□□ 1.81
TVP23A-206ENST00000572980 FAM173BQ6P4H8 233 aa26.34■■□□□ 1.81
TVP23A-206ENST00000572980 PPTC7Q8NI37 304 aa26.34■■□□□ 1.81
TVP23A-206ENST00000572980 BCAS3Q9H6U6 928 aa26.34■■□□□ 1.81
TVP23A-206ENST00000572980 SLC9A2Q9UBY0 812 aa26.34■■□□□ 1.81
TVP23A-206ENST00000572980 CIZ1Q9ULV3 898 aaPredicted RBP26.34■■□□□ 1.81
TVP23A-206ENST00000572980 ZDHHC9Q9Y397 364 aa26.34■■□□□ 1.81
TVP23A-206ENST00000572980 NOP56O00567 594 aaKnown RBP26.33■■□□□ 1.81
TVP23A-206ENST00000572980 DHX15O43143 795 aaKnown RBP26.33■■□□□ 1.81
TVP23A-206ENST00000572980 AFG1LQ8WV93 481 aa26.33■■□□□ 1.81
TVP23A-206ENST00000572980 HAS1Q92839 578 aa26.33■■□□□ 1.81
TVP23A-206ENST00000572980 TEKT3Q9BXF9 490 aa26.33■■□□□ 1.81
TVP23A-206ENST00000572980 A6NJR5 290 aa26.33■■□□□ 1.8
TVP23A-206ENST00000572980 LAD1O00515 517 aa26.33■■□□□ 1.8
TVP23A-206ENST00000572980 ZEB2O60315 1214 aa26.33■■□□□ 1.8
TVP23A-206ENST00000572980 BMP15O95972 392 aa26.33■■□□□ 1.8
TVP23A-206ENST00000572980 HSDL1Q3SXM5 330 aa26.33■■□□□ 1.8
TVP23A-206ENST00000572980 PCSK9Q8NBP7 692 aaKnown RBP26.33■■□□□ 1.8
TVP23A-206ENST00000572980 KLHDC9Q8NEP7 349 aa26.33■■□□□ 1.8
TVP23A-206ENST00000572980 ZNF396Q96N95 335 aaPredicted RBP26.33■■□□□ 1.8
TVP23A-206ENST00000572980 MTMR9Q96QG7 549 aa26.33■■□□□ 1.8
TVP23A-206ENST00000572980 CEP131Q9UPN4 1083 aa26.33■■□□□ 1.8
TVP23A-206ENST00000572980 ATP6V1DQ9Y5K8 247 aa26.33■■□□□ 1.8
TVP23A-206ENST00000572980 FRMPD3Q5JV73 1810 aa26.32■■□□□ 1.8
TVP23A-206ENST00000572980 POTEFA5A3E0 1075 aa26.32■■□□□ 1.8
TVP23A-206ENST00000572980 DDX39AO00148 427 aaKnown RBP26.32■■□□□ 1.8
TVP23A-206ENST00000572980 PSMD10O75832 226 aa26.32■■□□□ 1.8
TVP23A-206ENST00000572980 CST5P28325 142 aaPredicted RBP26.32■■□□□ 1.8
TVP23A-206ENST00000572980 KRT76Q01546 638 aa26.32■■□□□ 1.8
TVP23A-206ENST00000572980 SP4Q02446 784 aa26.32■■□□□ 1.8
TVP23A-206ENST00000572980 PTGDRQ13258 359 aa26.32■■□□□ 1.8
TVP23A-206ENST00000572980 LRRC41Q15345 812 aa26.32■■□□□ 1.8
TVP23A-206ENST00000572980 TMEM60Q9H2L4 133 aa26.32■■□□□ 1.8
TVP23A-206ENST00000572980 CTAGE5O15320 804 aa26.31■■□□□ 1.8
TVP23A-206ENST00000572980 OR52Z1P0C646 297 aa26.31■■□□□ 1.8
TVP23A-206ENST00000572980 BEX3Q00994 111 aa26.31■■□□□ 1.8
TVP23A-206ENST00000572980 GJA10Q969M2 543 aa26.31■■□□□ 1.8
TVP23A-206ENST00000572980 PCDHA12Q9UN75 941 aa26.31■■□□□ 1.8
TVP23A-206ENST00000572980 DOCK5Q9H7D0 1870 aa26.3■■□□□ 1.8
TVP23A-206ENST00000572980 MYADML2A6NDP7 307 aa26.3■■□□□ 1.8
TVP23A-206ENST00000572980 KBTBD13C9JR72 458 aa26.3■■□□□ 1.8
TVP23A-206ENST00000572980 PPFIA4O75335 1185 aa26.3■■□□□ 1.8
TVP23A-206ENST00000572980 MMP3P08254 477 aa26.3■■□□□ 1.8
TVP23A-206ENST00000572980 TXKP42681 527 aa26.3■■□□□ 1.8
TVP23A-206ENST00000572980 IRX5P78411 483 aaPredicted RBP26.3■■□□□ 1.8
TVP23A-206ENST00000572980 SF3A1Q15459 793 aaKnown RBP26.3■■□□□ 1.8
TVP23A-206ENST00000572980 DGKDQ16760 1214 aa26.3■■□□□ 1.8
TVP23A-206ENST00000572980 ZNF746Q6NUN9 644 aaPredicted RBP26.3■■□□□ 1.8
TVP23A-206ENST00000572980 C4orf32Q8N8J7 132 aa26.3■■□□□ 1.8
TVP23A-206ENST00000572980 ANKLE1Q8NAG6 615 aa26.3■■□□□ 1.8
TVP23A-206ENST00000572980 SEPT1Q8WYJ6 367 aa26.3■■□□□ 1.8
TVP23A-206ENST00000572980 GPR20Q99678 358 aa26.3■■□□□ 1.8
TVP23A-206ENST00000572980 TSEN34Q9BSV6 310 aaKnown RBP26.3■■□□□ 1.8
TVP23A-206ENST00000572980 DNM1LO00429 736 aa26.29■■□□□ 1.8
TVP23A-206ENST00000572980 KPNA6O60684 536 aa26.29■■□□□ 1.8
TVP23A-206ENST00000572980 KCNA10Q16322 511 aa26.29■■□□□ 1.8
TVP23A-206ENST00000572980 ATL3Q6DD88 541 aa26.29■■□□□ 1.8
TVP23A-206ENST00000572980 TTC12Q9H892 705 aaPredicted RBP26.29■■□□□ 1.8
TVP23A-206ENST00000572980 ELP1O95163 1332 aa26.29■■□□□ 1.8
TVP23A-206ENST00000572980 CCDC85CA6NKD9 419 aa26.29■■□□□ 1.8
TVP23A-206ENST00000572980 ACTR2P61160 394 aa26.29■■□□□ 1.8
TVP23A-206ENST00000572980 FOXD4L6Q3SYB3 417 aaPredicted RBP26.29■■□□□ 1.8
TVP23A-206ENST00000572980 FOXD4L3Q6VB84 417 aaPredicted RBP26.29■■□□□ 1.8
TVP23A-206ENST00000572980 SMAP1Q8IYB5 467 aaPredicted RBP26.29■■□□□ 1.8
TVP23A-206ENST00000572980 KIAA0100Q14667 2235 aaKnown RBP26.28■■□□□ 1.8
TVP23A-206ENST00000572980 SFNP31947 248 aa26.28■■□□□ 1.8
TVP23A-206ENST00000572980 PRPHP41219 470 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms