RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 GPKOWQ92917 476 aaPredicted RBP eCLIP13.55□□□□□ -0.24
NDE1-206ENST00000572967 TIFAQ96CG3 184 aa13.55□□□□□ -0.24
NDE1-206ENST00000572967 PBX4Q9BYU1 374 aa13.55□□□□□ -0.24
NDE1-206ENST00000572967 GLT8D2Q9H1C3 349 aa13.55□□□□□ -0.24
NDE1-206ENST00000572967 MTIF3Q9H2K0 278 aaKnown RBP13.55□□□□□ -0.24
NDE1-206ENST00000572967 NOD1Q9Y239 953 aa13.55□□□□□ -0.24
NDE1-206ENST00000572967 RBAK-RBAKDNI3L0D1 243 aa13.54□□□□□ -0.24
NDE1-206ENST00000572967 KPNA6O60684 536 aa13.54□□□□□ -0.24
NDE1-206ENST00000572967 EIF3JO75822 258 aaKnown RBP13.54□□□□□ -0.24
NDE1-206ENST00000572967 RGS20O76081 388 aa13.54□□□□□ -0.24
NDE1-206ENST00000572967 SUPT20HL2P0C7V6 817 aa13.54□□□□□ -0.24
NDE1-206ENST00000572967 SCG2P13521 617 aa13.54□□□□□ -0.24
NDE1-206ENST00000572967 NTRK3Q16288 839 aa13.54□□□□□ -0.24
NDE1-206ENST00000572967 RASIP1Q5U651 963 aa13.54□□□□□ -0.24
NDE1-206ENST00000572967 CCDC82Q8N4S0 544 aa13.54□□□□□ -0.24
NDE1-206ENST00000572967 MAFAQ8NHW3 353 aaPredicted RBP13.54□□□□□ -0.24
NDE1-206ENST00000572967 PHKBQ93100 1093 aa13.54□□□□□ -0.24
NDE1-206ENST00000572967 ALG1Q9BT22 464 aa13.54□□□□□ -0.24
NDE1-206ENST00000572967 BRMS1Q9HCU9 246 aa13.54□□□□□ -0.24
NDE1-206ENST00000572967 DDX41Q9UJV9 622 aaKnown RBP13.54□□□□□ -0.24
NDE1-206ENST00000572967 V9GY48 417 aaPredicted RBP13.54□□□□□ -0.24
NDE1-206ENST00000572967 FRMPD4Q14CM0 1322 aa13.54□□□□□ -0.24
NDE1-206ENST00000572967 hCG_1642624A0A1W2PR95 340 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 GGPS1O95749 300 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 FGBP02675 491 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 GJB2P29033 226 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 FUT2Q10981 343 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 GRIN2CQ14957 1233 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 SAFBQ15424 915 aaKnown RBP eCLIP13.53□□□□□ -0.24
NDE1-206ENST00000572967 PTGISQ16647 500 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 DGKDQ16760 1214 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 PFKFB3Q16875 520 aaPredicted RBP13.53□□□□□ -0.24
NDE1-206ENST00000572967 GDF6Q6KF10 455 aaPredicted RBP13.53□□□□□ -0.24
NDE1-206ENST00000572967 DHX37Q8IY37 1157 aaKnown RBP13.53□□□□□ -0.24
NDE1-206ENST00000572967 TET1Q8NFU7 2136 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 PPTC7Q8NI37 304 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 KAT2BQ92831 832 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 VWCEQ96DN2 955 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 SPATA33Q96N06 139 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 NKX2-4Q9H2Z4 354 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 ZNF576Q9H609 170 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 SH3GLB2Q9NR46 395 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 MAP3K20Q9NYL2 800 aaKnown RBP13.53□□□□□ -0.24
NDE1-206ENST00000572967 SIP14410 1827 aa13.53□□□□□ -0.24
NDE1-206ENST00000572967 H3BQV1 296 aa13.52□□□□□ -0.25
NDE1-206ENST00000572967 JAK2O60674 1132 aa13.52□□□□□ -0.25
NDE1-206ENST00000572967 F2P00734 622 aa13.52□□□□□ -0.25
NDE1-206ENST00000572967 PSEN2P49810 448 aa13.52□□□□□ -0.25
NDE1-206ENST00000572967 RABGGTBP53611 331 aa13.52□□□□□ -0.25
NDE1-206ENST00000572967 PTPN11Q06124 597 aaPredicted RBP13.52□□□□□ -0.25
NDE1-206ENST00000572967 ST3GAL1Q11201 340 aa13.52□□□□□ -0.25
NDE1-206ENST00000572967 MFSD10Q14728 455 aa13.52□□□□□ -0.25
NDE1-206ENST00000572967 GALNT17Q6IS24 598 aa13.52□□□□□ -0.25
NDE1-206ENST00000572967 HEATR3Q7Z4Q2 680 aa13.52□□□□□ -0.25
NDE1-206ENST00000572967 BICD2Q8TD16 824 aa13.52□□□□□ -0.25
NDE1-206ENST00000572967 EMID1Q96A84 441 aaPredicted RBP13.52□□□□□ -0.25
NDE1-206ENST00000572967 C8orf76Q96K31 380 aa13.52□□□□□ -0.25
NDE1-206ENST00000572967 KATNAL1Q9BW62 490 aa13.52□□□□□ -0.25
NDE1-206ENST00000572967 YBX2Q9Y2T7 364 aaKnown RBP13.52□□□□□ -0.25
NDE1-206ENST00000572967 COL6A3P12111 3177 aa13.52□□□□□ -0.25
NDE1-206ENST00000572967 PITPNM1O00562 1244 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 CTDNEP1O95476 244 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 GNA11P29992 359 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 NAPAP54920 295 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 LAMC2Q13753 1193 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 RAB30Q15771 203 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 KIAA0753Q2KHM9 967 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 HSDL1Q3SXM5 330 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 CELF3Q5SZQ8 465 aaKnown RBP13.51□□□□□ -0.25
NDE1-206ENST00000572967 MCTP2Q6DN12 878 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 USP17L6PQ6QN14 398 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.51□□□□□ -0.25
NDE1-206ENST00000572967 SAMD3Q8N6K7 520 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 DHX38Q92620 1227 aaKnown RBP13.51□□□□□ -0.25
NDE1-206ENST00000572967 CUL5Q93034 780 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 CTAGE1Q96RT6 745 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 BARHL2Q9NY43 387 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 HDAC6Q9UBN7 1215 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 GTF2IRD1Q9UHL9 959 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 CIZ1Q9ULV3 898 aaPredicted RBP13.51□□□□□ -0.25
NDE1-206ENST00000572967 MICAL3Q7RTP6 2002 aa13.51□□□□□ -0.25
NDE1-206ENST00000572967 ESYT2A0FGR8 921 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 PFKMP08237 780 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 IQCF3P0C7M6 154 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 MYOGP15173 224 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 NUCB2P80303 420 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 MRPS9P82933 396 aaKnown RBP13.5□□□□□ -0.25
NDE1-206ENST00000572967 SP2Q02086 613 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 SP4Q02446 784 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 BFSP2Q13515 415 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 UBE2SQ16763 222 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 MYSM1Q5VVJ2 828 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 LARP1BQ659C4 914 aaKnown RBP13.5□□□□□ -0.25
NDE1-206ENST00000572967 VSIG10LQ86VR7 867 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 SESTD1Q86VW0 696 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 RPUSD2Q8IZ73 545 aaKnown RBP13.5□□□□□ -0.25
NDE1-206ENST00000572967 CCDC155Q8N6L0 562 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 C7orf31Q8N865 590 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 RETREG2Q8NC44 543 aa13.5□□□□□ -0.25
NDE1-206ENST00000572967 MLXIPQ9HAP2 919 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms